RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 CCDC85CA6NKD9 419 aa18.68■□□□□ 0.58
PFN1-203ENST00000574872 CYBAP13498 195 aa18.68■□□□□ 0.58
PFN1-203ENST00000574872 SAMD3Q8N6K7 520 aa18.68■□□□□ 0.58
PFN1-203ENST00000574872 CCDC148Q8NFR7 591 aa18.68■□□□□ 0.58
PFN1-203ENST00000574872 NSUN6Q8TEA1 469 aaKnown RBP18.68■□□□□ 0.58
PFN1-203ENST00000574872 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.68■□□□□ 0.587e-6■□□□□ 9.4
PFN1-203ENST00000574872 HMX1Q9NP08 348 aaPredicted RBP18.68■□□□□ 0.58
PFN1-203ENST00000574872 PXMP2Q9NR77 195 aa18.68■□□□□ 0.58
PFN1-203ENST00000574872 MAP3K20Q9NYL2 800 aaKnown RBP18.68■□□□□ 0.58
PFN1-203ENST00000574872 RPTORQ8N122 1335 aa18.68■□□□□ 0.58
PFN1-203ENST00000574872 PIK3CDO00329 1044 aa18.67■□□□□ 0.58
PFN1-203ENST00000574872 ADAMTS3O15072 1205 aa18.67■□□□□ 0.58
PFN1-203ENST00000574872 MRPL12P52815 198 aaKnown RBP18.67■□□□□ 0.58
PFN1-203ENST00000574872 PDE4DQ08499 809 aa18.67■□□□□ 0.58
PFN1-203ENST00000574872 FBXO16Q8IX29 292 aaPredicted RBP18.67■□□□□ 0.58
PFN1-203ENST00000574872 IL31RAQ8NI17 732 aa18.67■□□□□ 0.58
PFN1-203ENST00000574872 PGBD1Q96JS3 809 aa18.67■□□□□ 0.58
PFN1-203ENST00000574872 ALG1Q9BT22 464 aa18.67■□□□□ 0.58
PFN1-203ENST00000574872 GJB4Q9NTQ9 266 aa18.67■□□□□ 0.58
PFN1-203ENST00000574872 TMEM260Q9NX78 707 aa18.67■□□□□ 0.58
PFN1-203ENST00000574872 ESYT2A0FGR8 921 aa18.66■□□□□ 0.58
PFN1-203ENST00000574872 NLRP5P59047 1200 aa18.66■□□□□ 0.58
PFN1-203ENST00000574872 ANO1Q5XXA6 986 aa18.66■□□□□ 0.58
PFN1-203ENST00000574872 WASF1Q92558 559 aa18.66■□□□□ 0.58
PFN1-203ENST00000574872 MPHOSPH6Q99547 160 aaKnown RBP18.66■□□□□ 0.58
PFN1-203ENST00000574872 LLPHQ9BRT6 129 aaKnown RBP18.66■□□□□ 0.58
PFN1-203ENST00000574872 ZMYND12Q9H0C1 365 aa18.66■□□□□ 0.58
PFN1-203ENST00000574872 C6orf50Q9HD87 102 aa18.66■□□□□ 0.58
PFN1-203ENST00000574872 SH3GLB2Q9NR46 395 aa18.66■□□□□ 0.58
PFN1-203ENST00000574872 KCNJ14Q9UNX9 436 aa18.66■□□□□ 0.58
PFN1-203ENST00000574872 BRCA2P51587 3418 aa18.66■□□□□ 0.58
PFN1-203ENST00000574872 KIAA0100Q14667 2235 aaKnown RBP18.65■□□□□ 0.58
PFN1-203ENST00000574872 SPDYE3A6NKU9 549 aa18.65■□□□□ 0.58
PFN1-203ENST00000574872 ZNF865P0CJ78 1059 aaPredicted RBP18.65■□□□□ 0.58
PFN1-203ENST00000574872 MYCLP12524 364 aaPredicted RBP18.65■□□□□ 0.58
PFN1-203ENST00000574872 EDNRBP24530 442 aa18.65■□□□□ 0.58
PFN1-203ENST00000574872 ACVR2BQ13705 512 aa18.65■□□□□ 0.58
PFN1-203ENST00000574872 JAKMIP3Q5VZ66 844 aa18.65■□□□□ 0.58
PFN1-203ENST00000574872 RASGRP4Q8TDF6 673 aa18.65■□□□□ 0.58
PFN1-203ENST00000574872 MORC4Q8TE76 937 aa18.65■□□□□ 0.58
PFN1-203ENST00000574872 LENG1Q96BZ8 264 aaPredicted RBP18.65■□□□□ 0.58
PFN1-203ENST00000574872 ZFP91Q96JP5 570 aaPredicted RBP18.65■□□□□ 0.58
PFN1-203ENST00000574872 DEFB118Q96PH6 123 aa18.65■□□□□ 0.58
PFN1-203ENST00000574872 PDCD2LQ9BRP1 358 aa18.65■□□□□ 0.58
PFN1-203ENST00000574872 TMEM106CQ9BVX2 250 aa18.65■□□□□ 0.58
PFN1-203ENST00000574872 KATNBL1Q9H079 304 aa18.65■□□□□ 0.58
PFN1-203ENST00000574872 ABHD16BQ9H3Z7 469 aa18.65■□□□□ 0.58
PFN1-203ENST00000574872 LRRC37A2A6NM11 1700 aa18.64■□□□□ 0.57
PFN1-203ENST00000574872 B4DLN1 442 aa18.64■□□□□ 0.57
PFN1-203ENST00000574872 NR3C2P08235 984 aa18.64■□□□□ 0.57
PFN1-203ENST00000574872 GNA11P29992 359 aa18.64■□□□□ 0.57
PFN1-203ENST00000574872 SOX10P56693 466 aa18.64■□□□□ 0.57
PFN1-203ENST00000574872 PGM5Q15124 567 aa18.64■□□□□ 0.57
PFN1-203ENST00000574872 IWS1Q96ST2 819 aa18.64■□□□□ 0.57
PFN1-203ENST00000574872 GLT8D2Q9H1C3 349 aa18.64■□□□□ 0.57
PFN1-203ENST00000574872 PAK6Q9NQU5 681 aaPredicted RBP18.64■□□□□ 0.57
PFN1-203ENST00000574872 PDGFCQ9NRA1 345 aa18.64■□□□□ 0.57
PFN1-203ENST00000574872 NRBP1Q9UHY1 535 aa18.64■□□□□ 0.57
PFN1-203ENST00000574872 PCDHA6Q9UN73 950 aa18.64■□□□□ 0.57
PFN1-203ENST00000574872 PCDHA8Q9Y5H6 950 aa18.64■□□□□ 0.57
PFN1-203ENST00000574872 LOC102724159A0A0B4J2E5 919 aa18.63■□□□□ 0.57
PFN1-203ENST00000574872 POTEFA5A3E0 1075 aa18.63■□□□□ 0.57
PFN1-203ENST00000574872 SEPT4O43236 478 aa18.63■□□□□ 0.57
PFN1-203ENST00000574872 XBP1P17861 261 aa18.63■□□□□ 0.57
PFN1-203ENST00000574872 HMGN5P82970 282 aaKnown RBP18.63■□□□□ 0.57
PFN1-203ENST00000574872 PWP2Q15269 919 aaKnown RBP18.63■□□□□ 0.57
PFN1-203ENST00000574872 REXO1Q8N1G1 1221 aaKnown RBP18.63■□□□□ 0.57
PFN1-203ENST00000574872 ANO3Q9BYT9 981 aa18.63■□□□□ 0.57
PFN1-203ENST00000574872 VTA1Q9NP79 307 aa18.63■□□□□ 0.57
PFN1-203ENST00000574872 DDX20Q9UHI6 824 aaKnown RBP18.63■□□□□ 0.57
PFN1-203ENST00000574872 PCDHA4Q9UN74 947 aa18.63■□□□□ 0.57
PFN1-203ENST00000574872 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.62■□□□□ 0.57
PFN1-203ENST00000574872 CCND2P30279 289 aa18.62■□□□□ 0.57
PFN1-203ENST00000574872 ADCYAP1R1P41586 468 aa18.62■□□□□ 0.57
PFN1-203ENST00000574872 CLK2P49760 499 aaKnown RBP18.62■□□□□ 0.57
PFN1-203ENST00000574872 STXBP2Q15833 593 aa18.62■□□□□ 0.57
PFN1-203ENST00000574872 CCDC144BQ3MJ40 725 aa18.62■□□□□ 0.57
PFN1-203ENST00000574872 SEPT14Q6ZU15 432 aa18.62■□□□□ 0.57
PFN1-203ENST00000574872 FAM184AQ8NB25 1140 aa18.62■□□□□ 0.57
PFN1-203ENST00000574872 BICD2Q8TD16 824 aa18.62■□□□□ 0.57
PFN1-203ENST00000574872 U2AF1L4Q8WU68 220 aaKnown RBP18.62■□□□□ 0.57
PFN1-203ENST00000574872 FRMPD4Q14CM0 1322 aa18.62■□□□□ 0.57
PFN1-203ENST00000574872 K7ELQ4 463 aaPredicted RBP18.61■□□□□ 0.57
PFN1-203ENST00000574872 ADCY6O43306 1168 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 CAPN15O75808 1086 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 GJB1P08034 283 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 AKR1A1P14550 325 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 PTGS1P23219 599 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 GUCY1B3Q02153 619 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 AP3B2Q13367 1082 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 NPY5RQ15761 445 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 TMEM63BQ5T3F8 832 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 TAPT1Q6NXT6 567 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 VSIG10LQ86VR7 867 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 HSCBQ8IWL3 235 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 BLIDQ8IZY5 108 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 PHF20Q9BVI0 1012 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 EHMT1Q9H9B1 1298 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 FAM184BQ9ULE4 1060 aa18.61■□□□□ 0.57
PFN1-203ENST00000574872 FOSP01100 380 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms