RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 RETREG2Q8NC44 543 aa18.89■□□□□ 0.61
HCFC1R1-203ENST00000572355 FAM227BQ96M60 508 aa18.89■□□□□ 0.61
HCFC1R1-203ENST00000572355 HELLSQ9NRZ9 838 aa18.89■□□□□ 0.61
HCFC1R1-203ENST00000572355 NOD1Q9Y239 953 aa18.89■□□□□ 0.61
HCFC1R1-203ENST00000572355 PITPNM1O00562 1244 aa18.88■□□□□ 0.61
HCFC1R1-203ENST00000572355 ARHGEF15O94989 841 aa18.88■□□□□ 0.61
HCFC1R1-203ENST00000572355 FGAP02671 866 aa18.88■□□□□ 0.61
HCFC1R1-203ENST00000572355 IQCF3P0C7M6 154 aa18.88■□□□□ 0.61
HCFC1R1-203ENST00000572355 TXNP10599 105 aaKnown RBP18.88■□□□□ 0.61
HCFC1R1-203ENST00000572355 EDNRBP24530 442 aa18.88■□□□□ 0.61
HCFC1R1-203ENST00000572355 ZNF543Q08ER8 600 aa18.88■□□□□ 0.61
HCFC1R1-203ENST00000572355 USH1GQ495M9 461 aa18.88■□□□□ 0.61
HCFC1R1-203ENST00000572355 KRT40Q6A162 431 aa18.88■□□□□ 0.61
HCFC1R1-203ENST00000572355 ARNTL2Q8WYA1 636 aa18.88■□□□□ 0.61
HCFC1R1-203ENST00000572355 TCP11L1Q9NUJ3 509 aa18.88■□□□□ 0.61
HCFC1R1-203ENST00000572355 MTCH2Q9Y6C9 303 aa18.88■□□□□ 0.61
HCFC1R1-203ENST00000572355 KPNA6O60684 536 aa18.87■□□□□ 0.61
HCFC1R1-203ENST00000572355 ARIH2O95376 493 aa18.87■□□□□ 0.61
HCFC1R1-203ENST00000572355 BMP1P13497 986 aa18.87■□□□□ 0.61
HCFC1R1-203ENST00000572355 BFSP2Q13515 415 aa18.87■□□□□ 0.61
HCFC1R1-203ENST00000572355 AAK1Q2M2I8 961 aa18.87■□□□□ 0.61
HCFC1R1-203ENST00000572355 ANKRD45Q5TZF3 282 aa18.87■□□□□ 0.61
HCFC1R1-203ENST00000572355 HERC6Q8IVU3 1022 aa18.87■□□□□ 0.61
HCFC1R1-203ENST00000572355 WDR19Q8NEZ3 1342 aa18.87■□□□□ 0.61
HCFC1R1-203ENST00000572355 DNERQ8NFT8 737 aa18.87■□□□□ 0.61
HCFC1R1-203ENST00000572355 PNMA2Q9UL42 364 aa18.87■□□□□ 0.61
HCFC1R1-203ENST00000572355 A6NJR5 290 aa18.86■□□□□ 0.61
HCFC1R1-203ENST00000572355 GOLGA8HP0CJ92 632 aa18.86■□□□□ 0.61
HCFC1R1-203ENST00000572355 TAP1Q03518 808 aa18.86■□□□□ 0.61
HCFC1R1-203ENST00000572355 MCMDC2Q4G0Z9 681 aa18.86■□□□□ 0.61
HCFC1R1-203ENST00000572355 ZNF589Q86UQ0 364 aaPredicted RBP18.86■□□□□ 0.61
HCFC1R1-203ENST00000572355 CPVLQ9H3G5 476 aa18.86■□□□□ 0.61
HCFC1R1-203ENST00000572355 XIRP2A4UGR9 3374 aa18.86■□□□□ 0.61
HCFC1R1-203ENST00000572355 TET1Q8NFU7 2136 aa18.86■□□□□ 0.61
HCFC1R1-203ENST00000572355 TRIP12Q14669 1992 aaPredicted RBP18.86■□□□□ 0.61
HCFC1R1-203ENST00000572355 PRRC2BQ5JSZ5 2229 aaKnown RBP18.85■□□□□ 0.61
HCFC1R1-203ENST00000572355 ZMYM6O95789 1325 aa18.85■□□□□ 0.61
HCFC1R1-203ENST00000572355 B4DLN1 442 aa18.85■□□□□ 0.61
HCFC1R1-203ENST00000572355 KIF28PB7ZC32 967 aa18.85■□□□□ 0.61
HCFC1R1-203ENST00000572355 HSPD1P10809 573 aaKnown RBP18.85■□□□□ 0.61
HCFC1R1-203ENST00000572355 KCNJ6P48051 423 aa18.85■□□□□ 0.61
HCFC1R1-203ENST00000572355 MRPL12P52815 198 aaKnown RBP18.85■□□□□ 0.61
HCFC1R1-203ENST00000572355 PTPN11Q06124 597 aaPredicted RBP18.85■□□□□ 0.61
HCFC1R1-203ENST00000572355 PTGISQ16647 500 aa18.85■□□□□ 0.61
HCFC1R1-203ENST00000572355 TBC1D10CQ8IV04 446 aa18.85■□□□□ 0.61
HCFC1R1-203ENST00000572355 PHOSPHO2Q8TCD6 241 aa18.85■□□□□ 0.61
HCFC1R1-203ENST00000572355 LAMA4Q16363 1823 aa18.85■□□□□ 0.61
HCFC1R1-203ENST00000572355 KIAA1217Q5T5P2 1943 aa18.84■□□□□ 0.61
HCFC1R1-203ENST00000572355 MMP3P08254 477 aa18.84■□□□□ 0.61
HCFC1R1-203ENST00000572355 SNHG28P0DPA3 235 aa18.84■□□□□ 0.61
HCFC1R1-203ENST00000572355 PDE1AP54750 535 aa18.84■□□□□ 0.61
HCFC1R1-203ENST00000572355 NMIQ13287 307 aaPredicted RBP18.84■□□□□ 0.61
HCFC1R1-203ENST00000572355 MFSD6Q6ZSS7 791 aa18.84■□□□□ 0.61
HCFC1R1-203ENST00000572355 SEPT14Q6ZU15 432 aa18.84■□□□□ 0.61
HCFC1R1-203ENST00000572355 SPRED2Q7Z698 418 aa18.84■□□□□ 0.61
HCFC1R1-203ENST00000572355 CCDC155Q8N6L0 562 aa18.84■□□□□ 0.61
HCFC1R1-203ENST00000572355 AFG1LQ8WV93 481 aa18.84■□□□□ 0.61
HCFC1R1-203ENST00000572355 ZKSCAN3Q9BRR0 538 aa18.84■□□□□ 0.61
HCFC1R1-203ENST00000572355 NEDD4P46934 1319 aa18.83■□□□□ 0.61
HCFC1R1-203ENST00000572355 CCDC171Q6TFL3 1326 aa18.83■□□□□ 0.61
HCFC1R1-203ENST00000572355 MYH6P13533 1939 aa18.83■□□□□ 0.6
HCFC1R1-203ENST00000572355 TLL1O43897 1013 aa18.83■□□□□ 0.6
HCFC1R1-203ENST00000572355 BAIAP3O94812 1187 aa18.83■□□□□ 0.6
HCFC1R1-203ENST00000572355 POU3F3P20264 500 aaPredicted RBP18.83■□□□□ 0.6
HCFC1R1-203ENST00000572355 GPATCH4Q5T3I0 446 aaKnown RBP18.83■□□□□ 0.6
HCFC1R1-203ENST00000572355 CHST3Q7LGC8 479 aa18.83■□□□□ 0.6
HCFC1R1-203ENST00000572355 TTC14Q96N46 770 aa18.83■□□□□ 0.6
HCFC1R1-203ENST00000572355 UBA5Q9GZZ9 404 aa18.83■□□□□ 0.6
HCFC1R1-203ENST00000572355 GH1P01241 217 aa18.82■□□□□ 0.6
HCFC1R1-203ENST00000572355 RRP1P56182 461 aaKnown RBP18.82■□□□□ 0.6
HCFC1R1-203ENST00000572355 GRB10Q13322 594 aa18.82■□□□□ 0.6
HCFC1R1-203ENST00000572355 CDC37Q16543 378 aaPredicted RBP18.82■□□□□ 0.6
HCFC1R1-203ENST00000572355 LY6KQ17RY6 165 aa18.82■□□□□ 0.6
HCFC1R1-203ENST00000572355 GDF6Q6KF10 455 aaPredicted RBP18.82■□□□□ 0.6
HCFC1R1-203ENST00000572355 TMCO2Q7Z6W1 182 aaPredicted RBP18.82■□□□□ 0.6
HCFC1R1-203ENST00000572355 CAGE1Q8TC20 777 aa18.82■□□□□ 0.6
HCFC1R1-203ENST00000572355 AFAP1L1Q8TED9 768 aa18.82■□□□□ 0.6
HCFC1R1-203ENST00000572355 COG5Q9UP83 839 aa18.82■□□□□ 0.6
HCFC1R1-203ENST00000572355 TRANK1O15050 2925 aa18.82■□□□□ 0.6
HCFC1R1-203ENST00000572355 LCHNA4D1U4 455 aa18.81■□□□□ 0.6
HCFC1R1-203ENST00000572355 TRIM6-TRIM34B2RNG4 842 aa18.81■□□□□ 0.6
HCFC1R1-203ENST00000572355 WDR5P61964 334 aaKnown RBP18.81■□□□□ 0.6
HCFC1R1-203ENST00000572355 CCDC62Q6P9F0 684 aa18.81■□□□□ 0.6
HCFC1R1-203ENST00000572355 GDPD5Q8WTR4 605 aa18.81■□□□□ 0.6
HCFC1R1-203ENST00000572355 TBC1D5Q92609 795 aa18.81■□□□□ 0.6
HCFC1R1-203ENST00000572355 ESR2Q92731 530 aa18.81■□□□□ 0.6
HCFC1R1-203ENST00000572355 TAAR1Q96RJ0 339 aa18.81■□□□□ 0.6
HCFC1R1-203ENST00000572355 C1QTNF1Q9BXJ1 281 aa18.81■□□□□ 0.6
HCFC1R1-203ENST00000572355 COL20A1Q9P218 1284 aa18.81■□□□□ 0.6
HCFC1R1-203ENST00000572355 ABCB11O95342 1321 aa18.8■□□□□ 0.6
HCFC1R1-203ENST00000572355 PCP11498 1178 aaKnown RBP18.8■□□□□ 0.6
HCFC1R1-203ENST00000572355 SELPP16109 830 aa18.8■□□□□ 0.6
HCFC1R1-203ENST00000572355 PLA2G5P39877 138 aa18.8■□□□□ 0.6
HCFC1R1-203ENST00000572355 DEFB103AP81534 67 aa18.8■□□□□ 0.6
HCFC1R1-203ENST00000572355 ARHGAP1Q07960 439 aa18.8■□□□□ 0.6
HCFC1R1-203ENST00000572355 LRRC8DQ7L1W4 858 aa18.8■□□□□ 0.6
HCFC1R1-203ENST00000572355 SYTL5Q8TDW5 730 aaPredicted RBP18.8■□□□□ 0.6
HCFC1R1-203ENST00000572355 DHX38Q92620 1227 aaKnown RBP18.8■□□□□ 0.6
HCFC1R1-203ENST00000572355 HLA-CQ95604 372 aa18.8■□□□□ 0.6
HCFC1R1-203ENST00000572355 RILPL2Q969X0 211 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms