RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 ADGRE1Q14246 886 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.94■□□□□ 0.14
RPAIN-209ENST00000571558 FAM126BQ8IXS8 530 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 NECAB1Q8N987 351 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 REPS2Q8NFH8 660 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 GTF3C6Q969F1 213 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 MYL10Q9BUA6 226 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 UPF3AQ9H1J1 476 aaKnown RBP15.94■□□□□ 0.14
RPAIN-209ENST00000571558 KAT14Q9H8E8 782 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 IL23AQ9NPF7 189 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 FAM217BQ9NTX9 383 aaPredicted RBP15.94■□□□□ 0.14
RPAIN-209ENST00000571558 SYNPO2Q9UMS6 1093 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 GRXCR1A8MXD5 290 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 ATP2A1O14983 1001 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 FGBP02675 491 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 IGFBP4P22692 258 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 SCRN1Q12765 414 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 SAMD1Q6SPF0 538 aaPredicted RBP15.94■□□□□ 0.14
RPAIN-209ENST00000571558 CATIPQ7Z7H3 387 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 VTI1AQ96AJ9 217 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 LENG1Q96BZ8 264 aaPredicted RBP15.94■□□□□ 0.14
RPAIN-209ENST00000571558 IPO9Q96P70 1041 aaKnown RBP15.94■□□□□ 0.14
RPAIN-209ENST00000571558 FBXO28Q9NVF7 368 aa15.94■□□□□ 0.14
RPAIN-209ENST00000571558 PARP14Q460N5 1801 aa15.93■□□□□ 0.14
RPAIN-209ENST00000571558 BMP1P13497 986 aa15.93■□□□□ 0.14
RPAIN-209ENST00000571558 RXRAP19793 462 aa15.93■□□□□ 0.14
RPAIN-209ENST00000571558 SLC4A3P48751 1232 aa15.93■□□□□ 0.14
RPAIN-209ENST00000571558 STK3Q13188 491 aa15.93■□□□□ 0.14
RPAIN-209ENST00000571558 ACVR2BQ13705 512 aa15.93■□□□□ 0.14
RPAIN-209ENST00000571558 GNASQ5JWF2 1037 aa15.93■□□□□ 0.14
RPAIN-209ENST00000571558 MICU3Q86XE3 530 aa15.93■□□□□ 0.14
RPAIN-209ENST00000571558 RAB11FIP4Q86YS3 637 aa15.93■□□□□ 0.14
RPAIN-209ENST00000571558 LRRC47Q8N1G4 583 aaKnown RBP15.93■□□□□ 0.14
RPAIN-209ENST00000571558 MAP3K14Q99558 947 aa15.93■□□□□ 0.14
RPAIN-209ENST00000571558 SLKQ9H2G2 1235 aaPredicted RBP15.93■□□□□ 0.14
RPAIN-209ENST00000571558 RAPGEFL1Q9UHV5 662 aa15.93■□□□□ 0.14
RPAIN-209ENST00000571558 ZHX1Q9UKY1 873 aaPredicted RBP15.93■□□□□ 0.14
RPAIN-209ENST00000571558 PLXNA1Q9UIW2 1896 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 CABYRO75952 493 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 CD4P01730 458 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 CALM1P0DP23 149 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 CALM2P0DP24 149 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 CALM3P0DP25 149 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 SNHG28P0DPA3 235 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 CDC27P30260 824 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 METAP2P50579 478 aaKnown RBP eCLIP15.92■□□□□ 0.14
RPAIN-209ENST00000571558 CCT2P78371 535 aaKnown RBP15.92■□□□□ 0.14
RPAIN-209ENST00000571558 CCDC85BQ15834 202 aaPredicted RBP15.92■□□□□ 0.14
RPAIN-209ENST00000571558 SYNE3Q6ZMZ3 975 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 PRPF38AQ8NAV1 312 aaKnown RBP15.92■□□□□ 0.14
RPAIN-209ENST00000571558 FANCBQ8NB91 859 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 GMCL1P1Q8NEA9 526 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 NCOA5Q9HCD5 579 aaKnown RBP15.92■□□□□ 0.14
RPAIN-209ENST00000571558 CHD7Q9P2D1 2997 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 FBXO40Q9UH90 709 aa15.92■□□□□ 0.14
RPAIN-209ENST00000571558 GOLGA8AA7E2F4 631 aa15.91■□□□□ 0.14
RPAIN-209ENST00000571558 CTDNEP1O95476 244 aa15.91■□□□□ 0.14
RPAIN-209ENST00000571558 ACRP10323 421 aa15.91■□□□□ 0.14
RPAIN-209ENST00000571558 GRM4Q14833 912 aa15.91■□□□□ 0.14
RPAIN-209ENST00000571558 CCDC144BQ3MJ40 725 aa15.91■□□□□ 0.14
RPAIN-209ENST00000571558 SNRNP48Q6IEG0 339 aaKnown RBP15.91■□□□□ 0.14
RPAIN-209ENST00000571558 RASGRP2Q7LDG7 609 aa15.91■□□□□ 0.14
RPAIN-209ENST00000571558 CCDC83Q8IWF9 413 aa15.91■□□□□ 0.14
RPAIN-209ENST00000571558 INTS4Q96HW7 963 aaKnown RBP15.91■□□□□ 0.14
RPAIN-209ENST00000571558 SLF1Q9BQI6 1058 aa15.91■□□□□ 0.14
RPAIN-209ENST00000571558 PPP1R12CQ9BZL4 782 aa15.91■□□□□ 0.14
RPAIN-209ENST00000571558 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.91■□□□□ 0.14
RPAIN-209ENST00000571558 NAP1L2Q9ULW6 460 aaPredicted RBP15.91■□□□□ 0.14
RPAIN-209ENST00000571558 MYADML2A6NDP7 307 aa15.9■□□□□ 0.14
RPAIN-209ENST00000571558 PDHBP11177 359 aa15.9■□□□□ 0.14
RPAIN-209ENST00000571558 POU3F3P20264 500 aaPredicted RBP15.9■□□□□ 0.14
RPAIN-209ENST00000571558 ADD1P35611 737 aaKnown RBP15.9■□□□□ 0.14
RPAIN-209ENST00000571558 PPP2R5BQ15173 497 aa15.9■□□□□ 0.14
RPAIN-209ENST00000571558 FAM83BQ5T0W9 1011 aa15.9■□□□□ 0.14
RPAIN-209ENST00000571558 CCDC144CPQ8IYA2 1237 aa15.9■□□□□ 0.14
RPAIN-209ENST00000571558 RPUSD2Q8IZ73 545 aaKnown RBP15.9■□□□□ 0.14
RPAIN-209ENST00000571558 SLC43A3Q8NBI5 491 aa15.9■□□□□ 0.14
RPAIN-209ENST00000571558 PCDHA11Q9Y5I1 949 aa15.9■□□□□ 0.14
RPAIN-209ENST00000571558 TRANK1O15050 2925 aa15.9■□□□□ 0.14
RPAIN-209ENST00000571558 MYH4Q9Y623 1939 aa15.89■□□□□ 0.13
RPAIN-209ENST00000571558 XIRP2A4UGR9 3374 aa15.89■□□□□ 0.13
RPAIN-209ENST00000571558 PALM3A6NDB9 673 aaPredicted RBP15.89■□□□□ 0.13
RPAIN-209ENST00000571558 F5H6K3 240 aa15.89■□□□□ 0.13
RPAIN-209ENST00000571558 KLRC3Q07444 240 aa15.89■□□□□ 0.13
RPAIN-209ENST00000571558 FUT2Q10981 343 aa15.89■□□□□ 0.13
RPAIN-209ENST00000571558 NTRK3Q16288 839 aa15.89■□□□□ 0.13
RPAIN-209ENST00000571558 RTN1Q16799 776 aa15.89■□□□□ 0.13
RPAIN-209ENST00000571558 GMCL1Q96IK5 515 aa15.89■□□□□ 0.13
RPAIN-209ENST00000571558 NKX2-4Q9H2Z4 354 aa15.89■□□□□ 0.13
RPAIN-209ENST00000571558 HIPK3Q9H422 1215 aa15.89■□□□□ 0.13
RPAIN-209ENST00000571558 MAD2L2Q9UI95 211 aa15.89■□□□□ 0.13
RPAIN-209ENST00000571558 COL11A1P12107 1806 aaPredicted RBP15.89■□□□□ 0.13
RPAIN-209ENST00000571558 MYO9BQ13459 2157 aa15.88■□□□□ 0.13
RPAIN-209ENST00000571558 ZBED4O75132 1171 aa15.88■□□□□ 0.13
RPAIN-209ENST00000571558 NDUFB10O96000 172 aa15.88■□□□□ 0.13
RPAIN-209ENST00000571558 CYP2C18P33260 490 aa15.88■□□□□ 0.13
RPAIN-209ENST00000571558 OAZ1P54368 228 aa15.88■□□□□ 0.13
RPAIN-209ENST00000571558 TMTC3Q6ZXV5 915 aa15.88■□□□□ 0.13
RPAIN-209ENST00000571558 ANKRD35Q8N283 1001 aa15.88■□□□□ 0.13
RPAIN-209ENST00000571558 STAG2Q8N3U4 1231 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms