RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ZNF444Q8N0Y2 327 aaPredicted RBP12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 CLASRPQ8N2M8 674 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 CAGE1Q8TC20 777 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 DHX38Q92620 1227 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 COPS5Q92905 334 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 PABPC5Q96DU9 382 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 STRBPQ96SI9 672 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 ISY1Q9ULR0 285 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 MYH7BA7E2Y1 1941 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 SPTBN4Q9H254 2564 aa12.44□□□□□ -0.42
CTDNEP1-202ENST00000570380 KIAA1217Q5T5P2 1943 aa12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 IFIT2P09913 472 aaKnown RBP12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 CHMP4BP1P59074 171 aa12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 IKQ13123 557 aaPredicted RBP12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 COL19A1Q14993 1142 aa12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 BRDTQ58F21 947 aaPredicted RBP12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 GDF6Q6KF10 455 aaPredicted RBP12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 CCDC155Q8N6L0 562 aa12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 BANK1Q8NDB2 785 aa12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 CRBNQ96SW2 442 aa12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 UPF3BQ9BZI7 483 aaKnown RBP12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 BCL11AQ9H165 835 aa12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 ADD3Q9UEY8 706 aaKnown RBP12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 CTNNA3Q9UI47 895 aa12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 MUTYHQ9UIF7 546 aa12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 FAM50BQ9Y247 325 aa12.43□□□□□ -0.42
CTDNEP1-202ENST00000570380 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 NKRFO15226 690 aaKnown RBP eCLIP12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 PLA2G6O60733 806 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 RLBP1P12271 317 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 ATP5JP18859 108 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 MCCP23508 829 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 PTPN5P54829 565 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 BAATQ14032 418 aaPredicted RBP12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 HSP90AB4PQ58FF6 505 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 HERC4Q5GLZ8 1057 aaPredicted RBP12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 TCEAL5Q5H9L2 206 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 EP400NLQ6ZTU2 488 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 KCTD1Q719H9 257 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 ITPRIPQ8IWB1 547 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 GMCL1Q96IK5 515 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 HAUS7Q99871 368 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 CCPG1Q9ULG6 757 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 PRR12Q9ULL5 1215 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 INSL6Q9Y581 213 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 PLXNA3P51805 1871 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 PLIN4Q96Q06 1357 aa12.42□□□□□ -0.42
CTDNEP1-202ENST00000570380 MYO15AQ9UKN7 3530 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 RAD50Q92878 1312 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 LOC102724159A0A0B4J2E5 919 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 PARNO95453 639 aaKnown RBP12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 CKBP12277 381 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 LTBRP36941 435 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 SLC1A4P43007 532 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 RBL2Q08999 1139 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 TCF15Q12870 199 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 IKBKEQ14164 716 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 PPP2R5BQ15173 497 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 PWP2Q15269 919 aaKnown RBP12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 PTPROQ16827 1216 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 EPC2Q52LR7 807 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 TIGD5Q53EQ6 642 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 GIMAP6Q6P9H5 292 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 RASGRP2Q7LDG7 609 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 BMP8AQ7Z5Y6 402 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 SESTD1Q86VW0 696 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 RNF135Q8IUD6 432 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 NEDD1Q8NHV4 660 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 KIF1BPQ96EK5 621 aa12.41□□□□□ -0.42
CTDNEP1-202ENST00000570380 ZFHX2Q9C0A1 2572 aaPredicted RBP12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 H3BNC9 293 aa12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 NFIBO00712 420 aa12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 EFCAB14O75071 495 aa12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 HTRA4P83105 476 aaPredicted RBP12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 FOXK2Q01167 660 aa12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 MBTPS1Q14703 1052 aa12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 SMAD2Q15796 467 aaKnown RBP12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 RCSD1Q6JBY9 416 aa12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 TRAF7Q6Q0C0 670 aa12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 SP7Q8TDD2 431 aaPredicted RBP12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 SCFD2Q8WU76 684 aa12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 EDAQ92838 391 aa12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 NSUN3Q9H649 340 aaKnown RBP12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 EPB41L4AQ9HCS5 686 aaPredicted RBP12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 CLDND1Q9NY35 253 aa12.4□□□□□ -0.42
CTDNEP1-202ENST00000570380 COL4A6Q14031 1691 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 CACNA1AO00555 2505 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 GFRA3O60609 400 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 ARIH2O95376 493 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 ICAM1P05362 532 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 TSPY3P0CV98 308 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 TSPY8P0CW00 308 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 TXNP10599 105 aaKnown RBP12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 TFAP4Q01664 338 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 GPM6BQ13491 265 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 ZSCAN25Q6NSZ9 544 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 SLC30A10Q6XR72 485 aa12.39□□□□□ -0.43
CTDNEP1-202ENST00000570380 FTSJ3Q8IY81 847 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms