RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CCNT1O60563 726 aaKnown RBP17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 BMP15O95972 392 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 BCRP11274 1271 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 MCM7P33993 719 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 ARHGAP4P98171 946 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 CRHR2Q13324 411 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 MMP19Q99542 508 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 EFCC1Q9HA90 598 aa17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.55■□□□□ 0.4
HERPUD1-219ENST00000570273 RPTORQ8N122 1335 aa17.54■□□□□ 0.4
HERPUD1-219ENST00000570273 DDX11L8A8MPP1 907 aa17.54■□□□□ 0.4
HERPUD1-219ENST00000570273 CA12O43570 354 aa17.54■□□□□ 0.4
HERPUD1-219ENST00000570273 TLR2O60603 784 aa17.54■□□□□ 0.4
HERPUD1-219ENST00000570273 UBXN2AP68543 259 aa17.54■□□□□ 0.4
HERPUD1-219ENST00000570273 KCTD2Q14681 263 aa17.54■□□□□ 0.4
HERPUD1-219ENST00000570273 LINC00301Q8NCQ3 95 aa17.54■□□□□ 0.4
HERPUD1-219ENST00000570273 KCNG4Q8TDN1 519 aa17.54■□□□□ 0.4
HERPUD1-219ENST00000570273 TAAR1Q96RJ0 339 aa17.54■□□□□ 0.4
HERPUD1-219ENST00000570273 NAP1L4Q99733 375 aaKnown RBP17.54■□□□□ 0.4
HERPUD1-219ENST00000570273 R3HDMLQ9H3Y0 253 aa17.54■□□□□ 0.4
HERPUD1-219ENST00000570273 POTEB2H3BUK9 544 aa17.53■□□□□ 0.4
HERPUD1-219ENST00000570273 SPTLC2O15270 562 aa17.53■□□□□ 0.4
HERPUD1-219ENST00000570273 TDP2O95551 362 aa17.53■□□□□ 0.4
HERPUD1-219ENST00000570273 EIF2AK2P19525 551 aaKnown RBP17.53■□□□□ 0.4
HERPUD1-219ENST00000570273 MAP2K2P36507 400 aa17.53■□□□□ 0.4
HERPUD1-219ENST00000570273 SLC39A14Q15043 492 aa17.53■□□□□ 0.4
HERPUD1-219ENST00000570273 PTPAQ15257 358 aa17.53■□□□□ 0.4
HERPUD1-219ENST00000570273 TMEM87AQ8NBN3 555 aa17.53■□□□□ 0.4
HERPUD1-219ENST00000570273 RMDN3Q96TC7 470 aa17.53■□□□□ 0.4
HERPUD1-219ENST00000570273 RCOR1Q9UKL0 485 aa17.53■□□□□ 0.4
HERPUD1-219ENST00000570273 FRMPD4Q14CM0 1322 aa17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 PRPF40AO75400 957 aaKnown RBP17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 FCER1AP12319 257 aa17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 GCFC2P16383 781 aaKnown RBP17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 MAPK4P31152 587 aa17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 ZNF76P36508 570 aa17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 USP11P51784 963 aa17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 ORC2Q13416 577 aaPredicted RBP17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 NFKBIBQ15653 356 aa17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 ARHGEF16Q5VV41 709 aa17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 C17orf99Q6UX52 265 aa17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 CRYGNQ8WXF5 182 aa17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 PURBQ96QR8 312 aaKnown RBP17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 PXMP2Q9NR77 195 aa17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 IVNS1ABPQ9Y6Y0 642 aa17.52■□□□□ 0.4
HERPUD1-219ENST00000570273 ELP1O95163 1332 aa17.51■□□□□ 0.39
HERPUD1-219ENST00000570273 EDIL3O43854 480 aa17.51■□□□□ 0.39
HERPUD1-219ENST00000570273 NEMFO60524 1076 aa17.51■□□□□ 0.39
HERPUD1-219ENST00000570273 CYP3A4P08684 503 aa17.51■□□□□ 0.39
HERPUD1-219ENST00000570273 MARCKSP29966 332 aaPredicted RBP17.51■□□□□ 0.39
HERPUD1-219ENST00000570273 ME1P48163 572 aa17.51■□□□□ 0.39
HERPUD1-219ENST00000570273 PPP4R3AQ6IN85 833 aa17.51■□□□□ 0.39
HERPUD1-219ENST00000570273 IL31RAQ8NI17 732 aa17.51■□□□□ 0.39
HERPUD1-219ENST00000570273 DDX25Q9UHL0 483 aaKnown RBP17.51■□□□□ 0.39
HERPUD1-219ENST00000570273 ATP2C1P98194 919 aaPredicted RBP17.5■□□□□ 0.39
HERPUD1-219ENST00000570273 CNTN2Q02246 1040 aa17.5■□□□□ 0.39
HERPUD1-219ENST00000570273 PTGDRQ13258 359 aa17.5■□□□□ 0.39
HERPUD1-219ENST00000570273 TPRNQ4KMQ1 711 aa17.5■□□□□ 0.39
HERPUD1-219ENST00000570273 MOXD1Q6UVY6 613 aa17.5■□□□□ 0.39
HERPUD1-219ENST00000570273 GPR142Q7Z601 462 aa17.5■□□□□ 0.39
HERPUD1-219ENST00000570273 PLEKHH3Q7Z736 793 aa17.5■□□□□ 0.39
HERPUD1-219ENST00000570273 POTEDQ86YR6 584 aa17.5■□□□□ 0.39
HERPUD1-219ENST00000570273 NSUN6Q8TEA1 469 aaKnown RBP17.5■□□□□ 0.39
HERPUD1-219ENST00000570273 PDCD2LQ9BRP1 358 aa17.5■□□□□ 0.39
HERPUD1-219ENST00000570273 SLC37A4O43826 429 aa17.49■□□□□ 0.39
HERPUD1-219ENST00000570273 PPP6R2O75170 966 aa17.49■□□□□ 0.39
HERPUD1-219ENST00000570273 PGK2P07205 417 aa17.49■□□□□ 0.39
HERPUD1-219ENST00000570273 PTMSP20962 102 aa17.49■□□□□ 0.39
HERPUD1-219ENST00000570273 CCND2P30279 289 aa17.49■□□□□ 0.39
HERPUD1-219ENST00000570273 CIITAP33076 1130 aa17.49■□□□□ 0.39
HERPUD1-219ENST00000570273 PGM5Q15124 567 aa17.49■□□□□ 0.39
HERPUD1-219ENST00000570273 LMBRD1Q9NUN5 540 aa17.49■□□□□ 0.39
HERPUD1-219ENST00000570273 ADD3Q9UEY8 706 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-219ENST00000570273 MRVI1Q9Y6F6 885 aa17.49■□□□□ 0.39
HERPUD1-219ENST00000570273 CYP3A7-CYP3A51PA0A087WV96 503 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 GOLGA6L4A6NEF3 574 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 ECM2O94769 699 aaPredicted RBP17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 OR52Z1P0C646 297 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 MYCLP12524 364 aaPredicted RBP17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 CYP3A7P24462 503 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 CALCRLQ16602 461 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 PRR16Q569H4 304 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 PCNX4Q63HM2 1172 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 ABRAQ8N0Z2 381 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 FAM133AQ8N9E0 248 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 KRI1Q8N9T8 703 aaKnown RBP17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 DNERQ8NFT8 737 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 MBOAT7Q96N66 472 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 TMEM60Q9H2L4 133 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 MORC2Q9Y6X9 1032 aaPredicted RBP17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 MYH7BA7E2Y1 1941 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 TCHHQ07283 1943 aa17.48■□□□□ 0.39
HERPUD1-219ENST00000570273 SOWAHBA6NEL2 793 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 FAM86B1E9PN63 330 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 LAD1O00515 517 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 STRNO43815 780 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 GADD45BO75293 160 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 NR3C2P08235 984 aa17.47■□□□□ 0.39
HERPUD1-219ENST00000570273 FAM86B2P0C5J1 330 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms