RNA–Protein interactions for RNA: ENST00000569804.2

LPCAT4-208, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-208ENST00000569804 PI4K2BQ8TCG2 481 aa12.67□□□□□ -0.38
LPCAT4-208ENST00000569804 GDPD5Q8WTR4 605 aa12.67□□□□□ -0.38
LPCAT4-208ENST00000569804 DHX38Q92620 1227 aaKnown RBP12.67□□□□□ -0.38
LPCAT4-208ENST00000569804 STX8Q9UNK0 236 aa12.67□□□□□ -0.38
LPCAT4-208ENST00000569804 PI4K2BG5E9Z4 385 aa12.66□□□□□ -0.38
LPCAT4-208ENST00000569804 SLC16A2P36021 539 aa12.66□□□□□ -0.38
LPCAT4-208ENST00000569804 DEFB103AP81534 67 aa12.66□□□□□ -0.38
LPCAT4-208ENST00000569804 CTDSPL2Q05D32 466 aa12.66□□□□□ -0.38
LPCAT4-208ENST00000569804 PPP2R5BQ15173 497 aa12.66□□□□□ -0.38
LPCAT4-208ENST00000569804 FAM47CQ5HY64 1035 aa12.66□□□□□ -0.38
LPCAT4-208ENST00000569804 C20orf194Q5TEA3 1177 aa12.66□□□□□ -0.38
LPCAT4-208ENST00000569804 SESTD1Q86VW0 696 aa12.66□□□□□ -0.38
LPCAT4-208ENST00000569804 DCAF4Q8WV16 495 aa12.66□□□□□ -0.38
LPCAT4-208ENST00000569804 NAPBQ9H115 298 aa12.66□□□□□ -0.38
LPCAT4-208ENST00000569804 ADD3Q9UEY8 706 aaKnown RBP12.66□□□□□ -0.38
LPCAT4-208ENST00000569804 TRIOO75962 3097 aa12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 TSPY2A6NKD2 308 aa12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 NKRFO15226 690 aaKnown RBP eCLIP12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 CXCL10P02778 98 aa12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 FGRP09769 529 aa12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 LRRFIP1Q32MZ4 808 aaKnown RBP12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 SYDE2Q5VT97 1194 aa12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 TRAF7Q6Q0C0 670 aa12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 KAT2BQ92831 832 aa12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 NACAP1Q9BZK3 213 aa12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 DCTPP1Q9H773 170 aa12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 LMCD1Q9NZU5 365 aa12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 ANAPC4Q9UJX5 808 aa12.65□□□□□ -0.38
LPCAT4-208ENST00000569804 C5orf42Q9H799 3197 aa12.65□□□□□ -0.39
LPCAT4-208ENST00000569804 MYO7AQ13402 2215 aa12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 PTPDC1A2A3K4 754 aa12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 ORC4O43929 436 aa12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 NBNO60934 754 aa12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 RPS6P62753 249 aaKnown RBP12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 BFSP2Q13515 415 aa12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 CCDC96Q2M329 555 aa12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 PPP4R3BQ5MIZ7 849 aa12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 GDF6Q6KF10 455 aaPredicted RBP12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 CCDC62Q6P9F0 684 aa12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 CAGE1Q8TC20 777 aa12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 OTUD7AQ8TE49 926 aaPredicted RBP12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 SCFD2Q8WU76 684 aa12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 FTOQ9C0B1 505 aaKnown RBP eCLIP12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 SUGCTQ9HAC7 445 aa12.64□□□□□ -0.39
LPCAT4-208ENST00000569804 FRMPD2Q68DX3 1309 aaPredicted RBP12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 WDR19Q8NEZ3 1342 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 RAD50Q92878 1312 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 SALL3Q9BXA9 1300 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 LINC01553A4QN01 128 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 KIF28PB7ZC32 967 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 KPNA6O60684 536 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 GJB5O95377 273 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 SLC3A2P08195 630 aaKnown RBP12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 MMP3P08254 477 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 PDHBP11177 359 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 CALML3P27482 149 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 ERVK-21P61565 698 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 VPS53Q5VIR6 699 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 RNF207Q6ZRF8 634 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 FAM178BQ8IXR5 827 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 RETREG2Q8NC44 543 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 DNERQ8NFT8 737 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 AFAP1L1Q8TED9 768 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 WNT8BQ93098 351 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 GPATCH3Q96I76 525 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 UBE2ZQ9H832 354 aaPredicted RBP12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 GPHNQ9NQX3 736 aaPredicted RBP12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 MTMR7Q9Y216 660 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 COL4A6Q14031 1691 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 NLRC5Q86WI3 1866 aa12.63□□□□□ -0.39
LPCAT4-208ENST00000569804 TTC41PQ6P2S7 1318 aa12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 SNHG28P0DPA3 235 aa12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 TXNP10599 105 aaKnown RBP12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 ARHGAP1Q07960 439 aa12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 PDE4DQ08499 809 aa12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 MBTPS1Q14703 1052 aa12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 PTGISQ16647 500 aa12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 TRIM71Q2Q1W2 868 aaKnown RBP12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 LEXMQ3ZCV2 418 aa12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 CNKSR3Q6P9H4 555 aa12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 LRRC8DQ7L1W4 858 aa12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 TMEM47Q9BQJ4 181 aa12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 CHMP4BQ9H444 224 aaKnown RBP12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 MYH6P13533 1939 aa12.62□□□□□ -0.39
LPCAT4-208ENST00000569804 MYH7BA7E2Y1 1941 aa12.61□□□□□ -0.39
LPCAT4-208ENST00000569804 LAMA4Q16363 1823 aa12.61□□□□□ -0.39
LPCAT4-208ENST00000569804 PRR33A8MZF0 331 aa12.61□□□□□ -0.39
LPCAT4-208ENST00000569804 CKBP12277 381 aa12.61□□□□□ -0.39
LPCAT4-208ENST00000569804 IL9P15248 144 aa12.61□□□□□ -0.39
LPCAT4-208ENST00000569804 SELPP16109 830 aa12.61□□□□□ -0.39
LPCAT4-208ENST00000569804 KCNJ6P48051 423 aa12.61□□□□□ -0.39
LPCAT4-208ENST00000569804 ZNF543Q08ER8 600 aa12.61□□□□□ -0.39
LPCAT4-208ENST00000569804 BRDTQ58F21 947 aaPredicted RBP12.61□□□□□ -0.39
LPCAT4-208ENST00000569804 AFG1LQ8WV93 481 aa12.61□□□□□ -0.39
LPCAT4-208ENST00000569804 FSD1Q9BTV5 496 aa12.61□□□□□ -0.39
LPCAT4-208ENST00000569804 GPCPD1Q9NPB8 672 aa12.61□□□□□ -0.39
LPCAT4-208ENST00000569804 COL20A1Q9P218 1284 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms