RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 CASP8AP2Q9UKL3 1982 aa26.8■■□□□ 1.88
RAB40C-212ENST00000569575 BTBD18B2RXH4 712 aa26.79■■□□□ 1.88
RAB40C-212ENST00000569575 DTNBO60941 627 aa26.79■■□□□ 1.88
RAB40C-212ENST00000569575 HSPA8P11142 646 aaKnown RBP26.79■■□□□ 1.88
RAB40C-212ENST00000569575 CTGFP29279 349 aa26.79■■□□□ 1.88
RAB40C-212ENST00000569575 NONOQ15233 471 aaKnown RBP eCLIP26.79■■□□□ 1.881e-6■■■■□ 24.9
RAB40C-212ENST00000569575 ARHGEF16Q5VV41 709 aa26.79■■□□□ 1.88
RAB40C-212ENST00000569575 OLFML2BQ68BL8 750 aa26.79■■□□□ 1.88
RAB40C-212ENST00000569575 FCHSD1Q86WN1 690 aa26.79■■□□□ 1.88
RAB40C-212ENST00000569575 NOSTRINQ8IVI9 506 aa26.79■■□□□ 1.88
RAB40C-212ENST00000569575 MORC4Q8TE76 937 aa26.79■■□□□ 1.88
RAB40C-212ENST00000569575 TNFRSF25Q93038 417 aa26.79■■□□□ 1.88
RAB40C-212ENST00000569575 ANO3Q9BYT9 981 aa26.79■■□□□ 1.88
RAB40C-212ENST00000569575 RPTORQ8N122 1335 aa26.79■■□□□ 1.88
RAB40C-212ENST00000569575 VPS37CA5D8V6 355 aaPredicted RBP26.78■■□□□ 1.88
RAB40C-212ENST00000569575 DDIT3P35638 169 aa26.78■■□□□ 1.88
RAB40C-212ENST00000569575 SREBF1P36956 1147 aa26.78■■□□□ 1.88
RAB40C-212ENST00000569575 TRAPPC10P48553 1259 aa26.78■■□□□ 1.88
RAB40C-212ENST00000569575 GUCY1B3Q02153 619 aa26.78■■□□□ 1.88
RAB40C-212ENST00000569575 UBE2SQ16763 222 aa26.78■■□□□ 1.88
RAB40C-212ENST00000569575 TAAR1Q96RJ0 339 aa26.78■■□□□ 1.88
RAB40C-212ENST00000569575 PXMP2Q9NR77 195 aa26.78■■□□□ 1.88
RAB40C-212ENST00000569575 MTMR6Q9Y217 621 aa26.78■■□□□ 1.88
RAB40C-212ENST00000569575 SYNGAP1Q96PV0 1343 aa26.77■■□□□ 1.88
RAB40C-212ENST00000569575 FOXN1O15353 648 aa26.77■■□□□ 1.88
RAB40C-212ENST00000569575 COBLO75128 1261 aa26.77■■□□□ 1.88
RAB40C-212ENST00000569575 CYP3A4P08684 503 aa26.77■■□□□ 1.88
RAB40C-212ENST00000569575 ALDH5A1P51649 535 aaPredicted RBP26.77■■□□□ 1.88
RAB40C-212ENST00000569575 JAKMIP3Q5VZ66 844 aa26.77■■□□□ 1.88
RAB40C-212ENST00000569575 PCNX4Q63HM2 1172 aa26.77■■□□□ 1.88
RAB40C-212ENST00000569575 MOXD1Q6UVY6 613 aa26.77■■□□□ 1.88
RAB40C-212ENST00000569575 PXYLP1Q8TE99 480 aa26.77■■□□□ 1.88
RAB40C-212ENST00000569575 ARHGAP39Q9C0H5 1083 aa26.77■■□□□ 1.88
RAB40C-212ENST00000569575 COL20A1Q9P218 1284 aa26.77■■□□□ 1.88
RAB40C-212ENST00000569575 NRBP1Q9UHY1 535 aa26.77■■□□□ 1.88
RAB40C-212ENST00000569575 PLXNA1Q9UIW2 1896 aa26.76■■□□□ 1.88
RAB40C-212ENST00000569575 PGK2P07205 417 aa26.76■■□□□ 1.87
RAB40C-212ENST00000569575 EDNRBP24530 442 aa26.76■■□□□ 1.87
RAB40C-212ENST00000569575 FLT3LGP49771 235 aa26.76■■□□□ 1.87
RAB40C-212ENST00000569575 ORC2Q13416 577 aaPredicted RBP26.76■■□□□ 1.87
RAB40C-212ENST00000569575 MCTP1Q6DN14 999 aa26.76■■□□□ 1.87
RAB40C-212ENST00000569575 MAML3Q96JK9 1138 aa26.76■■□□□ 1.87
RAB40C-212ENST00000569575 PDCD2LQ9BRP1 358 aa26.76■■□□□ 1.87
RAB40C-212ENST00000569575 NOL7Q9UMY1 257 aaKnown RBP26.76■■□□□ 1.87
RAB40C-212ENST00000569575 SOWAHBA6NEL2 793 aa26.75■■□□□ 1.87
RAB40C-212ENST00000569575 ZSCAN22P10073 491 aaPredicted RBP26.75■■□□□ 1.87
RAB40C-212ENST00000569575 CNTN2Q02246 1040 aa26.75■■□□□ 1.87
RAB40C-212ENST00000569575 STXBP2Q15833 593 aa26.75■■□□□ 1.87
RAB40C-212ENST00000569575 PKN2Q16513 984 aaKnown RBP26.75■■□□□ 1.87
RAB40C-212ENST00000569575 RILPL1Q5EBL4 403 aa26.75■■□□□ 1.87
RAB40C-212ENST00000569575 VSIG10LQ86VR7 867 aa26.75■■□□□ 1.87
RAB40C-212ENST00000569575 OXER1Q8TDS5 423 aa26.75■■□□□ 1.87
RAB40C-212ENST00000569575 CRYGNQ8WXF5 182 aa26.75■■□□□ 1.87
RAB40C-212ENST00000569575 TSKSQ9UJT2 592 aa26.75■■□□□ 1.87
RAB40C-212ENST00000569575 ATP6V1DQ9Y5K8 247 aa26.75■■□□□ 1.87
RAB40C-212ENST00000569575 MAFGO15525 162 aa26.74■■□□□ 1.87
RAB40C-212ENST00000569575 EIF3JO75822 258 aaKnown RBP26.74■■□□□ 1.87
RAB40C-212ENST00000569575 NR3C2P08235 984 aa26.74■■□□□ 1.87
RAB40C-212ENST00000569575 GCFC2P16383 781 aaKnown RBP26.74■■□□□ 1.87
RAB40C-212ENST00000569575 CCND2P30279 289 aa26.74■■□□□ 1.87
RAB40C-212ENST00000569575 FOSBP53539 338 aa26.74■■□□□ 1.87
RAB40C-212ENST00000569575 NR5A1Q13285 461 aa26.74■■□□□ 1.87
RAB40C-212ENST00000569575 PGM5Q15124 567 aa26.74■■□□□ 1.87
RAB40C-212ENST00000569575 TMEM260Q9NX78 707 aa26.74■■□□□ 1.87
RAB40C-212ENST00000569575 BRD1O95696 1058 aa26.73■■□□□ 1.87
RAB40C-212ENST00000569575 CIITAP33076 1130 aa26.73■■□□□ 1.87
RAB40C-212ENST00000569575 ARHGAP4P98171 946 aa26.73■■□□□ 1.87
RAB40C-212ENST00000569575 PRKCZQ05513 592 aa26.73■■□□□ 1.87
RAB40C-212ENST00000569575 PIK3AP1Q6ZUJ8 805 aa26.73■■□□□ 1.87
RAB40C-212ENST00000569575 OTOP1Q7RTM1 612 aa26.73■■□□□ 1.87
RAB40C-212ENST00000569575 NEK8Q86SG6 692 aa26.73■■□□□ 1.87
RAB40C-212ENST00000569575 TBCKQ8TEA7 893 aa26.73■■□□□ 1.87
RAB40C-212ENST00000569575 TINF2Q9BSI4 451 aa26.73■■□□□ 1.87
RAB40C-212ENST00000569575 PRDM10Q9NQV6 1147 aa26.73■■□□□ 1.87
RAB40C-212ENST00000569575 IGHA2P01877 340 aa26.72■■□□□ 1.87
RAB40C-212ENST00000569575 CYP2B6P20813 491 aa26.72■■□□□ 1.87
RAB40C-212ENST00000569575 PDE4DQ08499 809 aa26.72■■□□□ 1.87
RAB40C-212ENST00000569575 ATL3Q6DD88 541 aa26.72■■□□□ 1.87
RAB40C-212ENST00000569575 PPP4R3AQ6IN85 833 aa26.72■■□□□ 1.87
RAB40C-212ENST00000569575 NIPA1Q7RTP0 329 aa26.72■■□□□ 1.87
RAB40C-212ENST00000569575 RAET1EQ8TD07 263 aa26.72■■□□□ 1.87
RAB40C-212ENST00000569575 RASGRP4Q8TDF6 673 aa26.72■■□□□ 1.87
RAB40C-212ENST00000569575 FGD4Q96M96 766 aa26.72■■□□□ 1.87
RAB40C-212ENST00000569575 TRIM17Q9Y577 477 aa26.72■■□□□ 1.87
RAB40C-212ENST00000569575 LCTP09848 1927 aa26.72■■□□□ 1.87
RAB40C-212ENST00000569575 CYP3A7-CYP3A51PA0A087WV96 503 aa26.71■■□□□ 1.87
RAB40C-212ENST00000569575 CYP3A7P24462 503 aa26.71■■□□□ 1.87
RAB40C-212ENST00000569575 GNPTABQ3T906 1256 aa26.71■■□□□ 1.87
RAB40C-212ENST00000569575 MFSD14CQ5VZR4 134 aa26.71■■□□□ 1.87
RAB40C-212ENST00000569575 KCNV1Q6PIU1 500 aa26.71■■□□□ 1.87
RAB40C-212ENST00000569575 SLAIN1Q8ND83 568 aa26.71■■□□□ 1.87
RAB40C-212ENST00000569575 NPLOC4Q8TAT6 608 aa26.71■■□□□ 1.87
RAB40C-212ENST00000569575 CDHR1Q96JP9 859 aa26.71■■□□□ 1.87
RAB40C-212ENST00000569575 ABHD16BQ9H3Z7 469 aa26.71■■□□□ 1.87
RAB40C-212ENST00000569575 CHMP5Q9NZZ3 219 aa26.71■■□□□ 1.87
RAB40C-212ENST00000569575 F13A1P00488 732 aa26.7■■□□□ 1.86
RAB40C-212ENST00000569575 EIF2AK2P19525 551 aaKnown RBP26.7■■□□□ 1.86
RAB40C-212ENST00000569575 LBX1P52954 281 aa26.7■■□□□ 1.86
RAB40C-212ENST00000569575 CTU1Q7Z7A3 348 aaKnown RBP26.7■■□□□ 1.86
RAB40C-212ENST00000569575 VTA1Q9NP79 307 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms