RNA–Protein interactions for RNA: ENST00000568692.1

TSC2-224, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 636 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-224ENST00000568692 ZSCAN10Q96SZ4 725 aaPredicted RBP11.74□□□□□ -0.53
TSC2-224ENST00000568692 MPHOSPH6Q99547 160 aaKnown RBP11.74□□□□□ -0.53
TSC2-224ENST00000568692 MAF1Q9H063 256 aa11.74□□□□□ -0.53
TSC2-224ENST00000568692 WNT8AQ9H1J5 351 aa11.74□□□□□ -0.53
TSC2-224ENST00000568692 POLR3EQ9NVU0 708 aa11.74□□□□□ -0.53
TSC2-224ENST00000568692 CXXC1Q9P0U4 656 aaPredicted RBP11.74□□□□□ -0.53
TSC2-224ENST00000568692 ZSWIM5Q9P217 1185 aa11.74□□□□□ -0.53
TSC2-224ENST00000568692 LAMA4Q16363 1823 aa11.74□□□□□ -0.53
TSC2-224ENST00000568692 CHD7Q9P2D1 2997 aa11.73□□□□□ -0.53
TSC2-224ENST00000568692 A6NJR5 290 aa11.73□□□□□ -0.53
TSC2-224ENST00000568692 B4E1Z4 1266 aa11.73□□□□□ -0.53
TSC2-224ENST00000568692 FGBP02675 491 aa11.73□□□□□ -0.53
TSC2-224ENST00000568692 PPP2R5BQ15173 497 aa11.73□□□□□ -0.53
TSC2-224ENST00000568692 CDC37Q16543 378 aaPredicted RBP11.73□□□□□ -0.53
TSC2-224ENST00000568692 USH1GQ495M9 461 aa11.73□□□□□ -0.53
TSC2-224ENST00000568692 SKAP1Q86WV1 359 aa11.73□□□□□ -0.53
TSC2-224ENST00000568692 ADGRF4Q8IZF3 695 aa11.73□□□□□ -0.53
TSC2-224ENST00000568692 SCFD2Q8WU76 684 aa11.73□□□□□ -0.53
TSC2-224ENST00000568692 MTG1Q9BT17 334 aaPredicted RBP11.73□□□□□ -0.53
TSC2-224ENST00000568692 KAT14Q9H8E8 782 aa11.73□□□□□ -0.53
TSC2-224ENST00000568692 TRMT13Q9NUP7 481 aaKnown RBP11.73□□□□□ -0.53
TSC2-224ENST00000568692 TNKSO95271 1327 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 ABCB11O95342 1321 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 RAD50Q92878 1312 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 B4DLN1 442 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 ARIH2O95376 493 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 MYL3P08590 195 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 SUPT20HL2P0C7V6 817 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 MRPL12P52815 198 aaKnown RBP11.72□□□□□ -0.53
TSC2-224ENST00000568692 IMMTQ16891 758 aaKnown RBP11.72□□□□□ -0.53
TSC2-224ENST00000568692 ASPRV1Q53RT3 343 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 BRDTQ58F21 947 aaPredicted RBP11.72□□□□□ -0.53
TSC2-224ENST00000568692 OTOP2Q7RTS6 562 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 TBC1D5Q92609 795 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 COPS5Q92905 334 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 KRT23Q9C075 422 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 IL25Q9H293 177 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 MTIF3Q9H2K0 278 aaKnown RBP11.72□□□□□ -0.53
TSC2-224ENST00000568692 CTNNA3Q9UI47 895 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 SCN10AQ9Y5Y9 1956 aa11.72□□□□□ -0.53
TSC2-224ENST00000568692 KPNA6O60684 536 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 TXNP10599 105 aaKnown RBP11.71□□□□□ -0.53
TSC2-224ENST00000568692 CYP2C9P11712 490 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 TTLL4Q14679 1199 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 RAB30Q15771 203 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 QRICH1Q2TAL8 776 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 NBPF20Q3BBV1 942 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 C8orf34Q49A92 452 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 NFRKBQ6P4R8 1299 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 CCDC62Q6P9F0 684 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 RPUSD2Q8IZ73 545 aaKnown RBP11.71□□□□□ -0.53
TSC2-224ENST00000568692 SYTL5Q8TDW5 730 aaPredicted RBP11.71□□□□□ -0.53
TSC2-224ENST00000568692 SCLYQ96I15 445 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 TAAR1Q96RJ0 339 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 CNNM2Q9H8M5 875 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 JMJD4Q9H9V9 463 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 GPHNQ9NQX3 736 aaPredicted RBP11.71□□□□□ -0.53
TSC2-224ENST00000568692 COL20A1Q9P218 1284 aa11.71□□□□□ -0.53
TSC2-224ENST00000568692 MUC3AQ02505 3323 aa11.7□□□□□ -0.54
TSC2-224ENST00000568692 PARP1P09874 1014 aaKnown RBP11.7□□□□□ -0.54
TSC2-224ENST00000568692 GSPT1P15170 499 aaKnown RBP11.7□□□□□ -0.54
TSC2-224ENST00000568692 SEC23AQ15436 765 aa11.7□□□□□ -0.54
TSC2-224ENST00000568692 FBXO11Q86XK2 927 aa11.7□□□□□ -0.54
TSC2-224ENST00000568692 MCF2L2Q86YR7 1114 aa11.7□□□□□ -0.54
TSC2-224ENST00000568692 USP38Q8NB14 1042 aa11.7□□□□□ -0.54
TSC2-224ENST00000568692 NSUN6Q8TEA1 469 aaKnown RBP11.7□□□□□ -0.54
TSC2-224ENST00000568692 IWS1Q96ST2 819 aa11.7□□□□□ -0.54
TSC2-224ENST00000568692 UBAC1Q9BSL1 405 aa11.7□□□□□ -0.54
TSC2-224ENST00000568692 MSRAQ9UJ68 235 aa11.7□□□□□ -0.54
TSC2-224ENST00000568692 YBX2Q9Y2T7 364 aaKnown RBP11.7□□□□□ -0.54
TSC2-224ENST00000568692 MRPL11Q9Y3B7 192 aaKnown RBP11.7□□□□□ -0.54
TSC2-224ENST00000568692 PFKMP08237 780 aa11.69□□□□□ -0.54
TSC2-224ENST00000568692 GHRHRQ02643 423 aa11.69□□□□□ -0.54
TSC2-224ENST00000568692 PTPN11Q06124 597 aaPredicted RBP11.69□□□□□ -0.54
TSC2-224ENST00000568692 LY6KQ17RY6 165 aa11.69□□□□□ -0.54
TSC2-224ENST00000568692 IFIT1BQ5T764 474 aaKnown RBP11.69□□□□□ -0.54
TSC2-224ENST00000568692 STAG2Q8N3U4 1231 aa11.69□□□□□ -0.54
TSC2-224ENST00000568692 PPP1R13LQ8WUF5 828 aa11.69□□□□□ -0.54
TSC2-224ENST00000568692 MTMR8Q96EF0 704 aa11.69□□□□□ -0.54
TSC2-224ENST00000568692 RMDN3Q96TC7 470 aa11.69□□□□□ -0.54
TSC2-224ENST00000568692 GAS2L1Q99501 681 aaPredicted RBP11.69□□□□□ -0.54
TSC2-224ENST00000568692 NKX2-4Q9H2Z4 354 aa11.69□□□□□ -0.54
TSC2-224ENST00000568692 PRDM12Q9H4Q4 367 aa11.69□□□□□ -0.54
TSC2-224ENST00000568692 VAT1LQ9HCJ6 419 aa11.69□□□□□ -0.54
TSC2-224ENST00000568692 SLC4A7Q9Y6M7 1214 aa11.69□□□□□ -0.54
TSC2-224ENST00000568692 PITPNM1O00562 1244 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 OPLAHO14841 1288 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 DHX16O60231 1041 aaKnown RBP11.68□□□□□ -0.54
TSC2-224ENST00000568692 GH1P01241 217 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 MMP3P08254 477 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 RFC2P35250 354 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 HSD17B4P51659 736 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 RABGGTBP53611 331 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 ARHGAP1Q07960 439 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 ADGRE1Q14246 886 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 STXBP2Q15833 593 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 FAM47CQ5HY64 1035 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 TTC22Q5TAA0 569 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 SEPT14Q6ZU15 432 aa11.68□□□□□ -0.54
TSC2-224ENST00000568692 CYB5R4Q7L1T6 521 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms