RNA–Protein interactions for RNA: ENST00000568672.1

NAE1-219, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-219ENST00000568672 FLOT1O75955 427 aa9.52□□□□□ -0.89
NAE1-219ENST00000568672 REC8O95072 547 aa9.52□□□□□ -0.89
NAE1-219ENST00000568672 ADH1AP07327 375 aa9.52□□□□□ -0.89
NAE1-219ENST00000568672 PCP11498 1178 aaKnown RBP9.52□□□□□ -0.89
NAE1-219ENST00000568672 SLC16A2P36021 539 aa9.52□□□□□ -0.89
NAE1-219ENST00000568672 GMPRP36959 345 aa9.52□□□□□ -0.89
NAE1-219ENST00000568672 CTSOP43234 321 aaPredicted RBP9.52□□□□□ -0.89
NAE1-219ENST00000568672 EXOSC10Q01780 885 aaKnown RBP9.52□□□□□ -0.89
NAE1-219ENST00000568672 TSGA10IPQ3SY00 556 aa9.52□□□□□ -0.89
NAE1-219ENST00000568672 MYL10Q9BUA6 226 aa9.52□□□□□ -0.89
NAE1-219ENST00000568672 CNNM2Q9H8M5 875 aa9.52□□□□□ -0.89
NAE1-219ENST00000568672 ZCCHC17Q9NP64 241 aaKnown RBP9.52□□□□□ -0.89
NAE1-219ENST00000568672 POLMQ9NP87 494 aaPredicted RBP9.52□□□□□ -0.89
NAE1-219ENST00000568672 TMEM232C9JQI7 657 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 SH2B2O14492 632 aaPredicted RBP9.51□□□□□ -0.89
NAE1-219ENST00000568672 PDHBP11177 359 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 BMP3P12645 472 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 RXRAP19793 462 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 SP3Q02447 781 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 TRDNQ13061 729 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 COG2Q14746 738 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 CCDC96Q2M329 555 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 TMEM67Q5HYA8 995 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 RALYLQ86SE5 291 aaKnown RBP9.51□□□□□ -0.89
NAE1-219ENST00000568672 DGKHQ86XP1 1220 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 NPAS3Q8IXF0 933 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 STAG2Q8N3U4 1231 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 REPS2Q8NFH8 660 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 SMCR8Q8TEV9 937 aaPredicted RBP9.51□□□□□ -0.89
NAE1-219ENST00000568672 LPAR1Q92633 364 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 IRF7Q92985 503 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 JAKMIP1Q96N16 626 aaKnown RBP9.51□□□□□ -0.89
NAE1-219ENST00000568672 TTC14Q96N46 770 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 NEK1Q96PY6 1258 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 UBAC1Q9BSL1 405 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 UBA5Q9GZZ9 404 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 PORCNQ9H237 461 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 SH2D4AQ9H788 454 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 LY9Q9HBG7 655 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 ISY1Q9ULR0 285 aaKnown RBP9.51□□□□□ -0.89
NAE1-219ENST00000568672 CASP8AP2Q9UKL3 1982 aa9.51□□□□□ -0.89
NAE1-219ENST00000568672 RLFQ13129 1914 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 WIPF1O43516 503 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 SLC1A4P43007 532 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 LACTBP83111 547 aaPredicted RBP9.5□□□□□ -0.89
NAE1-219ENST00000568672 PABPC4Q13310 644 aaKnown RBP eCLIP9.5□□□□□ -0.896e-8■□□□□ 10.8
NAE1-219ENST00000568672 TMEM132BQ14DG7 1078 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.5□□□□□ -0.89
NAE1-219ENST00000568672 LBX2Q6XYB7 198 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 IQCA1Q86XH1 822 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 GMCL1Q96IK5 515 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 SLF1Q9BQI6 1058 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 KAT14Q9H8E8 782 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 EFCC1Q9HA90 598 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 PRDM10Q9NQV6 1147 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 MORF4L1Q9UBU8 362 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 PPP1R9AQ9ULJ8 1098 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 GABRQQ9UN88 632 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 ADAMTS5Q9UNA0 930 aa9.5□□□□□ -0.89
NAE1-219ENST00000568672 MYH4Q9Y623 1939 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 VWA5AO00534 786 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 DTNBO60941 627 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 SNHG28P0DPA3 235 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 MCM5P33992 734 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 PSMC4P43686 418 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 ERVK-9P63128 1117 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 ERVK-24P63145 666 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 ZNF543Q08ER8 600 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 WTAPQ15007 396 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 IFIT1BQ5T764 474 aaKnown RBP9.49□□□□□ -0.89
NAE1-219ENST00000568672 RNF20Q5VTR2 975 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 DHX32Q7L7V1 743 aaKnown RBP9.49□□□□□ -0.89
NAE1-219ENST00000568672 NBPF11Q86T75 865 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 CCDC144CPQ8IYA2 1237 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 CPXCR1Q8N123 301 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 GPRC5AQ8NFJ5 357 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 MOV10L1Q9BXT6 1211 aaKnown RBP9.49□□□□□ -0.89
NAE1-219ENST00000568672 UPF3BQ9BZI7 483 aaKnown RBP9.49□□□□□ -0.89
NAE1-219ENST00000568672 RAVER2Q9HCJ3 691 aaKnown RBP9.49□□□□□ -0.89
NAE1-219ENST00000568672 HOXC10Q9NYD6 342 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 PRR12Q9ULL5 1215 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 RIPK3Q9Y572 518 aa9.49□□□□□ -0.89
NAE1-219ENST00000568672 ZKSCAN1P17029 563 aaPredicted RBP9.48□□□□□ -0.89
NAE1-219ENST00000568672 CASTP20810 708 aaKnown RBP9.48□□□□□ -0.89
NAE1-219ENST00000568672 RPS6KB1P23443 525 aa9.48□□□□□ -0.89
NAE1-219ENST00000568672 GCLCP48506 637 aaPredicted RBP9.48□□□□□ -0.89
NAE1-219ENST00000568672 PTSQ03393 145 aa9.48□□□□□ -0.89
NAE1-219ENST00000568672 PLS1Q14651 629 aa9.48□□□□□ -0.89
NAE1-219ENST00000568672 GRM4Q14833 912 aa9.48□□□□□ -0.89
NAE1-219ENST00000568672 FAM110CQ1W6H9 321 aa9.48□□□□□ -0.89
NAE1-219ENST00000568672 NOM1Q5C9Z4 860 aaKnown RBP9.48□□□□□ -0.89
NAE1-219ENST00000568672 CCDC174Q6PII3 467 aa9.48□□□□□ -0.89
NAE1-219ENST00000568672 OTOP1Q7RTM1 612 aa9.48□□□□□ -0.89
NAE1-219ENST00000568672 CMTR1Q8N1G2 835 aaKnown RBP9.48□□□□□ -0.89
NAE1-219ENST00000568672 KDF1Q8NAX2 398 aaPredicted RBP9.48□□□□□ -0.89
NAE1-219ENST00000568672 NUP133Q8WUM0 1156 aa9.48□□□□□ -0.89
NAE1-219ENST00000568672 DCAF4Q8WV16 495 aa9.48□□□□□ -0.89
NAE1-219ENST00000568672 VAT1LQ9HCJ6 419 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms