RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 DLK2Q6UY11 383 aa9.17□□□□□ -0.94
SMG1-214ENST00000568038 KRT26Q7Z3Y9 468 aa9.17□□□□□ -0.94
SMG1-214ENST00000568038 TTC6Q86TZ1 520 aa9.17□□□□□ -0.94
SMG1-214ENST00000568038 FAM83AQ86UY5 434 aa9.17□□□□□ -0.94
SMG1-214ENST00000568038 DNAJB12Q9NXW2 375 aaKnown RBP9.17□□□□□ -0.94
SMG1-214ENST00000568038 ARPP21Q9UBL0 812 aaPredicted RBP9.17□□□□□ -0.94
SMG1-214ENST00000568038 PGAP2Q9UHJ9 254 aa9.17□□□□□ -0.94
SMG1-214ENST00000568038 SLC6A14Q9UN76 642 aa9.17□□□□□ -0.94
SMG1-214ENST00000568038 POLR2AP24928 1970 aaKnown RBP9.17□□□□□ -0.94
SMG1-214ENST00000568038 PITPNM2Q9BZ72 1349 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 SLC27A2O14975 620 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 LILRB5O75023 590 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 HLA-DOAP06340 250 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 EPB42P16452 691 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 MCCP23508 829 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 PPARAQ07869 468 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 NECTIN1Q15223 517 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 IMMTQ16891 758 aaKnown RBP9.16□□□□□ -0.94
SMG1-214ENST00000568038 C11orf91Q3C1V1 193 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 SBK1Q52WX2 424 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 NBPF12Q5TAG4 269 aaPredicted RBP9.16□□□□□ -0.94
SMG1-214ENST00000568038 LDHDQ86WU2 507 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 DYNLL2Q96FJ2 89 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 CSRNP1Q96S65 589 aa9.16□□□□□ -0.94
SMG1-214ENST00000568038 GLIS2Q9BZE0 524 aaPredicted RBP9.16□□□□□ -0.94
SMG1-214ENST00000568038 DHX36Q9H2U1 1008 aaKnown RBP9.16□□□□□ -0.94
SMG1-214ENST00000568038 UPF2Q9HAU5 1272 aaKnown RBP9.16□□□□□ -0.94
SMG1-214ENST00000568038 JPH1Q9HDC5 661 aaPredicted RBP9.16□□□□□ -0.94
SMG1-214ENST00000568038 MYH1P12882 1939 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 NAV1Q8NEY1 1877 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 FOCADQ5VW36 1801 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 ZMYM6O95789 1325 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 EPB41L2O43491 1005 aaKnown RBP9.15□□□□□ -0.94
SMG1-214ENST00000568038 PRMT3O60678 531 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 MICAL2O94851 1124 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 CYP21A2P08686 494 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 HSPA4P34932 840 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 COL9A3Q14050 684 aaPredicted RBP9.15□□□□□ -0.94
SMG1-214ENST00000568038 C20orf204Q6ZNR8 217 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 CDC37L1Q7L3B6 337 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 MIGA2Q7L4E1 593 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 TBC1D10CQ8IV04 446 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 CRACR2BQ8N4Y2 399 aaPredicted RBP9.15□□□□□ -0.94
SMG1-214ENST00000568038 SLC44A5Q8NCS7 719 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 TEPSINQ96N21 525 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 INCENPQ9NQS7 918 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMG1-214ENST00000568038 TOMM22Q9NS69 142 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 PI4KBQ9UBF8 816 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 USP20Q9Y2K6 914 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 TACC3Q9Y6A5 838 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 TAF6LQ9Y6J9 622 aa9.15□□□□□ -0.94
SMG1-214ENST00000568038 ATRNL1Q5VV63 1379 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 TRAF5O00463 557 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 PRDM1O75626 825 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 SLC3A2P08195 630 aaKnown RBP9.14□□□□□ -0.95
SMG1-214ENST00000568038 NID1P14543 1247 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 ZKSCAN1P17029 563 aaPredicted RBP9.14□□□□□ -0.95
SMG1-214ENST00000568038 GRNP28799 593 aaKnown RBP9.14□□□□□ -0.95
SMG1-214ENST00000568038 INPP5BP32019 993 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 GATA4P43694 442 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 CDK8P49336 464 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 ARSDP51689 593 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 FMR1Q06787 632 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMG1-214ENST00000568038 PRKG1Q13976 671 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 GRIK4Q16099 956 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 RRP12Q5JTH9 1297 aaKnown RBP9.14□□□□□ -0.95
SMG1-214ENST00000568038 AKNAD1Q5T1N1 836 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 PSAPL1Q6NUJ1 521 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 FOXP4Q8IVH2 680 aaPredicted RBP9.14□□□□□ -0.95
SMG1-214ENST00000568038 CDCA5Q96FF9 252 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 IFT43Q96FT9 208 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 C22orf23Q9BZE7 217 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMG1-214ENST00000568038 PRDM6Q9NQX0 595 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 SERPINB13Q9UIV8 391 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 ANAPC4Q9UJX5 808 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 PPP2R3BQ9Y5P8 575 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 SNX14Q9Y5W7 946 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 UTRNP46939 3433 aa9.14□□□□□ -0.95
SMG1-214ENST00000568038 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.13□□□□□ -0.95
SMG1-214ENST00000568038 E7EWF7 191 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 SASH3O75995 380 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 TARSP26639 723 aaKnown RBP9.13□□□□□ -0.95
SMG1-214ENST00000568038 GABPAQ06546 454 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 PDE4BQ07343 736 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 SUPT20HL1Q3ZLR7 823 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 MFSD6Q6ZSS7 791 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 STOX1Q6ZVD7 989 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 C16orf86Q6ZW13 317 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 STAG1Q8WVM7 1258 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 KCNB2Q92953 911 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 EHD4Q9H223 541 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 DNAJC18Q9H819 358 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 ZNF408Q9H9D4 720 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 MKNK2Q9HBH9 465 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 LRFN2Q9ULH4 789 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 FZD1Q9UP38 647 aa9.13□□□□□ -0.95
SMG1-214ENST00000568038 DDX60LQ5H9U9 1706 aaKnown RBP9.13□□□□□ -0.95
SMG1-214ENST00000568038 COL2A1P02458 1487 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms