RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 NOC4LQ9BVI4 516 aaKnown RBP21.7■■□□□ 1.06
LINC01238-205ENST00000567549 MAP3K20Q9NYL2 800 aaKnown RBP21.7■■□□□ 1.06
LINC01238-205ENST00000567549 ZSWIM5Q9P217 1185 aa21.7■■□□□ 1.06
LINC01238-205ENST00000567549 RFC2P35250 354 aa21.69■■□□□ 1.06
LINC01238-205ENST00000567549 SART3Q15020 963 aaKnown RBP21.69■■□□□ 1.06
LINC01238-205ENST00000567549 STXBP2Q15833 593 aa21.69■■□□□ 1.06
LINC01238-205ENST00000567549 CCDC155Q8N6L0 562 aa21.69■■□□□ 1.06
LINC01238-205ENST00000567549 PURBQ96QR8 312 aaKnown RBP21.69■■□□□ 1.06
LINC01238-205ENST00000567549 UBA5Q9GZZ9 404 aa21.69■■□□□ 1.06
LINC01238-205ENST00000567549 NOD1Q9Y239 953 aa21.69■■□□□ 1.06
LINC01238-205ENST00000567549 U3KPZ7 1027 aaPredicted RBP21.69■■□□□ 1.06
LINC01238-205ENST00000567549 A6NJR5 290 aa21.68■■□□□ 1.06
LINC01238-205ENST00000567549 ACTN1P12814 892 aa21.68■■□□□ 1.06
LINC01238-205ENST00000567549 PSMC6P62333 389 aa21.68■■□□□ 1.06
LINC01238-205ENST00000567549 FAM47CQ5HY64 1035 aa21.68■■□□□ 1.06
LINC01238-205ENST00000567549 RETREG2Q8NC44 543 aa21.68■■□□□ 1.06
LINC01238-205ENST00000567549 AMNQ9BXJ7 453 aa21.68■■□□□ 1.06
LINC01238-205ENST00000567549 TRPV6Q9H1D0 765 aa21.68■■□□□ 1.06
LINC01238-205ENST00000567549 ACRP10323 421 aa21.67■■□□□ 1.06
LINC01238-205ENST00000567549 BFSP2Q13515 415 aa21.67■■□□□ 1.06
LINC01238-205ENST00000567549 ARHGEF16Q5VV41 709 aa21.67■■□□□ 1.06
LINC01238-205ENST00000567549 C16orf59Q7L2K0 433 aa21.67■■□□□ 1.06
LINC01238-205ENST00000567549 SYMPKQ92797 1274 aaKnown RBP21.67■■□□□ 1.06
LINC01238-205ENST00000567549 RMDN3Q96TC7 470 aa21.67■■□□□ 1.06
LINC01238-205ENST00000567549 SLC4A7Q9Y6M7 1214 aa21.67■■□□□ 1.06
LINC01238-205ENST00000567549 GRIN2DO15399 1336 aa21.66■■□□□ 1.06
LINC01238-205ENST00000567549 PITPNM1O00562 1244 aa21.66■■□□□ 1.06
LINC01238-205ENST00000567549 GH1P01241 217 aa21.66■■□□□ 1.06
LINC01238-205ENST00000567549 CCL23P55773 120 aa21.66■■□□□ 1.06
LINC01238-205ENST00000567549 QRICH1Q2TAL8 776 aa21.66■■□□□ 1.06
LINC01238-205ENST00000567549 TTC22Q5TAA0 569 aa21.66■■□□□ 1.06
LINC01238-205ENST00000567549 RALYLQ86SE5 291 aaKnown RBP21.66■■□□□ 1.06
LINC01238-205ENST00000567549 PBX4Q9BYU1 374 aa21.66■■□□□ 1.06
LINC01238-205ENST00000567549 SLC28A3Q9HAS3 691 aa21.66■■□□□ 1.06
LINC01238-205ENST00000567549 DDX49Q9Y6V7 483 aaKnown RBP21.66■■□□□ 1.06
LINC01238-205ENST00000567549 SCN10AQ9Y5Y9 1956 aa21.65■■□□□ 1.06
LINC01238-205ENST00000567549 CASTP20810 708 aaKnown RBP21.65■■□□□ 1.06
LINC01238-205ENST00000567549 KCNV1Q6PIU1 500 aa21.65■■□□□ 1.06
LINC01238-205ENST00000567549 SYTL5Q8TDW5 730 aaPredicted RBP21.65■■□□□ 1.06
LINC01238-205ENST00000567549 KLRF2D3W0D1 207 aa21.64■■□□□ 1.05
LINC01238-205ENST00000567549 EIF3JO75822 258 aaKnown RBP21.64■■□□□ 1.05
LINC01238-205ENST00000567549 PARNO95453 639 aaKnown RBP21.64■■□□□ 1.05
LINC01238-205ENST00000567549 NBPF20Q3BBV1 942 aa21.64■■□□□ 1.05
LINC01238-205ENST00000567549 KATNAL1Q9BW62 490 aa21.64■■□□□ 1.05
LINC01238-205ENST00000567549 VAT1LQ9HCJ6 419 aa21.64■■□□□ 1.05
LINC01238-205ENST00000567549 ZBBXA8MT70 800 aa21.63■■□□□ 1.05
LINC01238-205ENST00000567549 ZBTB5O15062 677 aa21.63■■□□□ 1.05
LINC01238-205ENST00000567549 CFBP00751 764 aa21.63■■□□□ 1.05
LINC01238-205ENST00000567549 GRIN2CQ14957 1233 aa21.63■■□□□ 1.05
LINC01238-205ENST00000567549 SEPT14Q6ZU15 432 aa21.63■■□□□ 1.05
LINC01238-205ENST00000567549 OTOP2Q7RTS6 562 aa21.63■■□□□ 1.05
LINC01238-205ENST00000567549 JMJD4Q9H9V9 463 aa21.63■■□□□ 1.05
LINC01238-205ENST00000567549 KIAA1217Q5T5P2 1943 aa21.63■■□□□ 1.05
LINC01238-205ENST00000567549 DGKDQ16760 1214 aa21.62■■□□□ 1.05
LINC01238-205ENST00000567549 NCOA7Q8NI08 942 aa21.62■■□□□ 1.05
LINC01238-205ENST00000567549 CAGE1Q8TC20 777 aa21.62■■□□□ 1.05
LINC01238-205ENST00000567549 WNT8AQ9H1J5 351 aa21.62■■□□□ 1.05
LINC01238-205ENST00000567549 CPVLQ9H3G5 476 aa21.62■■□□□ 1.05
LINC01238-205ENST00000567549 TRMT13Q9NUP7 481 aaKnown RBP21.62■■□□□ 1.05
LINC01238-205ENST00000567549 PCDHA11Q9Y5I1 949 aa21.62■■□□□ 1.05
LINC01238-205ENST00000567549 A0A0C4DFX4 3053 aa21.62■■□□□ 1.05
LINC01238-205ENST00000567549 CUL9Q8IWT3 2517 aa21.61■■□□□ 1.05
LINC01238-205ENST00000567549 LAMC2Q13753 1193 aa21.61■■□□□ 1.05
LINC01238-205ENST00000567549 TMEM63BQ5T3F8 832 aa21.61■■□□□ 1.05
LINC01238-205ENST00000567549 CCDC62Q6P9F0 684 aa21.61■■□□□ 1.05
LINC01238-205ENST00000567549 TAAR1Q96RJ0 339 aa21.61■■□□□ 1.05
LINC01238-205ENST00000567549 PCDHA1Q9Y5I3 950 aa21.61■■□□□ 1.05
LINC01238-205ENST00000567549 MRVI1Q9Y6F6 885 aa21.61■■□□□ 1.05
LINC01238-205ENST00000567549 UMODL1Q5DID0 1318 aa21.6■■□□□ 1.05
LINC01238-205ENST00000567549 IFIT3O14879 490 aaKnown RBP21.6■■□□□ 1.05
LINC01238-205ENST00000567549 NR3C2P08235 984 aa21.6■■□□□ 1.05
LINC01238-205ENST00000567549 CYP2C9P11712 490 aa21.6■■□□□ 1.05
LINC01238-205ENST00000567549 ATP2A2P16615 1042 aaKnown RBP21.6■■□□□ 1.05
LINC01238-205ENST00000567549 PTGS1P23219 599 aa21.6■■□□□ 1.05
LINC01238-205ENST00000567549 HSD17B4P51659 736 aa21.6■■□□□ 1.05
LINC01238-205ENST00000567549 GHRHRQ02643 423 aa21.6■■□□□ 1.05
LINC01238-205ENST00000567549 SESTD1Q86VW0 696 aa21.6■■□□□ 1.05
LINC01238-205ENST00000567549 EMID1Q96A84 441 aaPredicted RBP21.6■■□□□ 1.05
LINC01238-205ENST00000567549 SLC9A7Q96T83 725 aa21.6■■□□□ 1.05
LINC01238-205ENST00000567549 TSPYL2Q9H2G4 693 aaPredicted RBP21.6■■□□□ 1.05
LINC01238-205ENST00000567549 PXMP2Q9NR77 195 aa21.6■■□□□ 1.05
LINC01238-205ENST00000567549 SUPT16HQ9Y5B9 1047 aaKnown RBP21.6■■□□□ 1.05
LINC01238-205ENST00000567549 KIF28PB7ZC32 967 aa21.59■■□□□ 1.05
LINC01238-205ENST00000567549 MMP3P08254 477 aa21.59■■□□□ 1.05
LINC01238-205ENST00000567549 EIF2AK2P19525 551 aaKnown RBP21.59■■□□□ 1.05
LINC01238-205ENST00000567549 WTAPQ15007 396 aa21.59■■□□□ 1.05
LINC01238-205ENST00000567549 SEC23AQ15436 765 aa21.59■■□□□ 1.05
LINC01238-205ENST00000567549 CATIPQ7Z7H3 387 aa21.59■■□□□ 1.05
LINC01238-205ENST00000567549 DHX37Q8IY37 1157 aaKnown RBP21.59■■□□□ 1.05
LINC01238-205ENST00000567549 PHOSPHO2Q8TCD6 241 aa21.59■■□□□ 1.05
LINC01238-205ENST00000567549 AFAP1L1Q8TED9 768 aa21.59■■□□□ 1.05
LINC01238-205ENST00000567549 AFG1LQ8WV93 481 aa21.59■■□□□ 1.05
LINC01238-205ENST00000567549 COPS5Q92905 334 aa21.59■■□□□ 1.05
LINC01238-205ENST00000567549 SCLYQ96I15 445 aa21.59■■□□□ 1.05
LINC01238-205ENST00000567549 COL25A1Q9BXS0 654 aaPredicted RBP21.59■■□□□ 1.05
LINC01238-205ENST00000567549 FTOQ9C0B1 505 aaKnown RBP eCLIP21.59■■□□□ 1.05
LINC01238-205ENST00000567549 MYO9BQ13459 2157 aa21.58■■□□□ 1.05
LINC01238-205ENST00000567549 GRXCR1A8MXD5 290 aa21.58■■□□□ 1.05
LINC01238-205ENST00000567549 BAIAP3O94812 1187 aa21.58■■□□□ 1.05
LINC01238-205ENST00000567549 TGFB3P10600 412 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms