RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 TPX2Q9ULW0 747 aaKnown RBP12.86□□□□□ -0.35
SIN3A-208ENST00000567289 HPCAL4Q9UM19 191 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 LGALS16A8MUM7 142 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 DDX39AO00148 427 aaKnown RBP12.86□□□□□ -0.35
SIN3A-208ENST00000567289 LRRN2O75325 713 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 XRCC5P13010 732 aaKnown RBP12.86□□□□□ -0.35
SIN3A-208ENST00000567289 CCNE1P24864 410 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 STAT1P42224 750 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 MAGOHP61326 146 aaKnown RBP12.86□□□□□ -0.35
SIN3A-208ENST00000567289 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
SIN3A-208ENST00000567289 LRRC47Q8N1G4 583 aaKnown RBP12.86□□□□□ -0.35
SIN3A-208ENST00000567289 GDAP1Q8TB36 358 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 STMN2Q93045 179 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 MAGOHBQ96A72 148 aaKnown RBP12.86□□□□□ -0.35
SIN3A-208ENST00000567289 DYNLL2Q96FJ2 89 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 ALDH8A1Q9H2A2 487 aaPredicted RBP12.86□□□□□ -0.35
SIN3A-208ENST00000567289 GOLPH3Q9H4A6 298 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 GPR108Q9NPR9 543 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 FCER1AP12319 257 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 ALDH3A1P30838 453 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 KCNJ6P48051 423 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 HDLBPQ00341 1268 aaKnown RBP12.86□□□□□ -0.35
SIN3A-208ENST00000567289 EMBQ6PCB8 327 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 RASGRP2Q7LDG7 609 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 PACS2Q86VP3 889 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 CD248Q9HCU0 757 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 PCDHA12Q9UN75 941 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 IFT172Q9UG01 1749 aa12.86□□□□□ -0.35
SIN3A-208ENST00000567289 H0Y3Z8 333 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 H7C1W4 665 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 CLIC2O15247 247 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 IFNB1P01574 187 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 PCCAP05165 728 aaPredicted RBP12.85□□□□□ -0.35
SIN3A-208ENST00000567289 PPP1R2P41236 205 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 STXBP4Q6ZWJ1 553 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 ATG9AQ7Z3C6 839 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 NEK8Q86SG6 692 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 LMNTD2Q8IXW0 634 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 MYCT1Q8N699 235 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 KCNV2Q8TDN2 545 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 PANK4Q9NVE7 773 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 HPS5Q9UPZ3 1129 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 PCDH11XQ9BZA7 1347 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 PCDH11YQ9BZA8 1340 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 EXOC3O60645 756 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 TMOD1P28289 359 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 MRPL12P52815 198 aaKnown RBP12.85□□□□□ -0.35
SIN3A-208ENST00000567289 CORO7P57737 925 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 TAOK1Q7L7X3 1001 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 PPFIBP2Q8ND30 876 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 TTLL11Q8NHH1 800 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 ZNF622Q969S3 477 aaKnown RBP eCLIP12.85□□□□□ -0.35
SIN3A-208ENST00000567289 MCUR1Q96AQ8 359 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 ANKZF1Q9H8Y5 726 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 DISC1Q9NRI5 854 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.85□□□□□ -0.35
SIN3A-208ENST00000567289 DMGDHQ9UI17 866 aaKnown RBP12.85□□□□□ -0.35
SIN3A-208ENST00000567289 SLC8A1P32418 973 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 ERFP50548 548 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 CHRNDQ07001 517 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 SNX1Q13596 522 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 CCNI2Q6ZMN8 369 aaPredicted RBP12.85□□□□□ -0.35
SIN3A-208ENST00000567289 STAG1Q8WVM7 1258 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 NAP1L3Q99457 506 aaPredicted RBP12.85□□□□□ -0.35
SIN3A-208ENST00000567289 RAB17Q9H0T7 212 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 KIAA1024Q9UPX6 916 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 ZBTB1Q9Y2K1 713 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 FRMD4BQ9Y2L6 1034 aa12.85□□□□□ -0.35
SIN3A-208ENST00000567289 USP42Q9H9J4 1324 aaKnown RBP12.84□□□□□ -0.35
SIN3A-208ENST00000567289 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
SIN3A-208ENST00000567289 HNRNPH1P31943 449 aaKnown RBP12.84□□□□□ -0.35
SIN3A-208ENST00000567289 KCNQ4P56696 695 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 ERVK-24P63145 666 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 MESDQ14696 234 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 TRIP13Q15645 432 aaPredicted RBP12.84□□□□□ -0.35
SIN3A-208ENST00000567289 CCDC38Q502W7 563 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 ALS2CLQ60I27 953 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 PHLDB2Q86SQ0 1253 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 USP17L3A6NCW0 530 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 USP17L4A6NCW7 530 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 PLEKP08567 350 aaPredicted RBP12.84□□□□□ -0.35
SIN3A-208ENST00000567289 NR2F2P24468 414 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 CARSP49589 748 aaKnown RBP12.84□□□□□ -0.35
SIN3A-208ENST00000567289 USP17L2Q6R6M4 530 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 USP17L1Q7RTZ2 530 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 ILDR1Q86SU0 546 aaPredicted RBP12.84□□□□□ -0.35
SIN3A-208ENST00000567289 DDX42Q86XP3 938 aaKnown RBP eCLIP12.84□□□□□ -0.35
SIN3A-208ENST00000567289 TBCKQ8TEA7 893 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 KLHL14Q9P2G3 628 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 MAP2P11137 1827 aaKnown RBP12.84□□□□□ -0.35
SIN3A-208ENST00000567289 MEIS1O00470 390 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 CLGNO14967 610 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 USP17L8P0C7I0 530 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 CYP2D6P10635 497 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 ADCY7P51828 1080 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 PABPC4Q13310 644 aaKnown RBP eCLIP12.84□□□□□ -0.35
SIN3A-208ENST00000567289 LRRC14Q15048 493 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 HLFQ16534 295 aa12.84□□□□□ -0.35
SIN3A-208ENST00000567289 MAN2A1Q16706 1144 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms