RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 PPIL6Q8IXY8 311 aa12.42□□□□□ -0.42
NIFKP4-201ENST00000567275 TMEM145Q8NBT3 493 aa12.42□□□□□ -0.42
NIFKP4-201ENST00000567275 BHLHE22Q8NFJ8 381 aaPredicted RBP12.42□□□□□ -0.42
NIFKP4-201ENST00000567275 KCTD13Q8WZ19 329 aa12.42□□□□□ -0.42
NIFKP4-201ENST00000567275 DIO2Q92813 273 aa12.42□□□□□ -0.42
NIFKP4-201ENST00000567275 IER2Q9BTL4 223 aa12.42□□□□□ -0.42
NIFKP4-201ENST00000567275 SIRT5Q9NXA8 310 aa12.42□□□□□ -0.42
NIFKP4-201ENST00000567275 MYOCOSA0A1B0GUC4 107 aa12.41□□□□□ -0.42
NIFKP4-201ENST00000567275 NR1I3Q14994 352 aa12.41□□□□□ -0.42
NIFKP4-201ENST00000567275 ZNF124Q15973 351 aa12.41□□□□□ -0.42
NIFKP4-201ENST00000567275 MBLAC2Q68D91 279 aa12.41□□□□□ -0.42
NIFKP4-201ENST00000567275 KLHL14Q9P2G3 628 aa12.41□□□□□ -0.42
NIFKP4-201ENST00000567275 PFDN2Q9UHV9 154 aa12.41□□□□□ -0.42
NIFKP4-201ENST00000567275 ABCA10Q8WWZ4 1543 aa12.41□□□□□ -0.42
NIFKP4-201ENST00000567275 GAPVD1Q14C86 1478 aa12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 SEMA7AO75326 666 aa12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 DBHP09172 617 aa12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 VIPR1P32241 457 aa12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 YBX1P67809 324 aaKnown RBP12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 IFRD2Q12894 506 aaPredicted RBP12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 KCNAB2Q13303 367 aa12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 INF2Q27J81 1249 aa12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 PAQR3Q6TCH7 311 aa12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 SPATC1Q76KD6 591 aa12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 KREMEN2Q8NCW0 462 aa12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 DRC1Q96MC2 740 aa12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 GOLGA2P5Q9HBQ8 144 aa12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 BTG4Q9NY30 223 aa12.4□□□□□ -0.42
NIFKP4-201ENST00000567275 TEX51A0A1B0GUA7 166 aa12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 SRGAP3O43295 1099 aa12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 CAPNS1P04632 268 aa12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 CYBBP04839 570 aa12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 MAP4K2Q12851 820 aa12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 ACBD5Q5T8D3 534 aaPredicted RBP12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 RPTNQ6XPR3 784 aa12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 DEPDC7Q96QD5 511 aa12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 SPATA9Q9BWV2 254 aa12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 ARHGEF4Q9NR80 690 aa12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 TMEFF2Q9UIK5 374 aaPredicted RBP12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 DBR1Q9UK59 544 aaKnown RBP12.39□□□□□ -0.43
NIFKP4-201ENST00000567275 TRAV20A0A0B4J274 112 aa12.38□□□□□ -0.43
NIFKP4-201ENST00000567275 ETV2O00321 342 aaPredicted RBP12.38□□□□□ -0.43
NIFKP4-201ENST00000567275 MYO1BO43795 1136 aa12.38□□□□□ -0.43
NIFKP4-201ENST00000567275 PPP1R11O60927 126 aaPredicted RBP12.38□□□□□ -0.43
NIFKP4-201ENST00000567275 SSRP1Q08945 709 aaKnown RBP12.38□□□□□ -0.43
NIFKP4-201ENST00000567275 TMC6Q7Z403 805 aa12.38□□□□□ -0.43
NIFKP4-201ENST00000567275 SRPK1Q96SB4 655 aaKnown RBP12.38□□□□□ -0.43
NIFKP4-201ENST00000567275 MARCH2Q9P0N8 246 aa12.38□□□□□ -0.43
NIFKP4-201ENST00000567275 TIMM13Q9Y5L4 95 aaPredicted RBP12.38□□□□□ -0.43
NIFKP4-201ENST00000567275 PRODHO43272 600 aa12.37□□□□□ -0.43
NIFKP4-201ENST00000567275 TSPAN15O95858 294 aa12.37□□□□□ -0.43
NIFKP4-201ENST00000567275 FUCA1P04066 466 aa12.37□□□□□ -0.43
NIFKP4-201ENST00000567275 LTBRP36941 435 aa12.37□□□□□ -0.43
NIFKP4-201ENST00000567275 RAP1GAPP47736 663 aa12.37□□□□□ -0.43
NIFKP4-201ENST00000567275 RPL11P62913 178 aaKnown RBP12.37□□□□□ -0.43
NIFKP4-201ENST00000567275 CBX2Q14781 532 aaPredicted RBP12.37□□□□□ -0.43
NIFKP4-201ENST00000567275 SLC35F1Q5T1Q4 408 aa12.37□□□□□ -0.43
NIFKP4-201ENST00000567275 ZC3H14Q6PJT7 736 aaKnown RBP12.37□□□□□ -0.43
NIFKP4-201ENST00000567275 CCDC103Q8IW40 242 aa12.37□□□□□ -0.43
NIFKP4-201ENST00000567275 MTA3Q9BTC8 594 aa12.37□□□□□ -0.43
NIFKP4-201ENST00000567275 TCAF2A6NFQ2 919 aa12.36□□□□□ -0.43
NIFKP4-201ENST00000567275 F8W031 263 aaPredicted RBP12.36□□□□□ -0.43
NIFKP4-201ENST00000567275 C1QTNF9P0C862 333 aa12.36□□□□□ -0.43
NIFKP4-201ENST00000567275 GLDCP23378 1020 aa12.36□□□□□ -0.43
NIFKP4-201ENST00000567275 RASA3Q14644 834 aa12.36□□□□□ -0.43
NIFKP4-201ENST00000567275 ATG14Q6ZNE5 492 aa12.36□□□□□ -0.43
NIFKP4-201ENST00000567275 LRP10Q7Z4F1 713 aa12.36□□□□□ -0.43
NIFKP4-201ENST00000567275 C1orf159Q96HA4 380 aa12.36□□□□□ -0.43
NIFKP4-201ENST00000567275 SGPP1Q9BX95 441 aa12.36□□□□□ -0.43
NIFKP4-201ENST00000567275 SNTG2Q9NY99 539 aa12.36□□□□□ -0.43
NIFKP4-201ENST00000567275 ABCA5Q8WWZ7 1642 aa12.36□□□□□ -0.43
NIFKP4-201ENST00000567275 DLX3O60479 287 aa12.35□□□□□ -0.43
NIFKP4-201ENST00000567275 GLI4P10075 376 aa12.35□□□□□ -0.43
NIFKP4-201ENST00000567275 FGFR1P11362 822 aa12.35□□□□□ -0.43
NIFKP4-201ENST00000567275 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
NIFKP4-201ENST00000567275 MAPKAPK2P49137 400 aa12.35□□□□□ -0.43
NIFKP4-201ENST00000567275 DLG4P78352 724 aa12.35□□□□□ -0.43
NIFKP4-201ENST00000567275 PLEKHN1Q494U1 663 aaPredicted RBP12.35□□□□□ -0.43
NIFKP4-201ENST00000567275 NSMFQ6X4W1 530 aa12.35□□□□□ -0.43
NIFKP4-201ENST00000567275 FBLN5Q9UBX5 448 aa12.35□□□□□ -0.43
NIFKP4-201ENST00000567275 ZC3H12DA2A288 527 aaKnown RBP12.34□□□□□ -0.43
NIFKP4-201ENST00000567275 PABPC1P11940 636 aaKnown RBP12.34□□□□□ -0.43
NIFKP4-201ENST00000567275 GTF2A2P52657 109 aa12.34□□□□□ -0.43
NIFKP4-201ENST00000567275 TESK1Q15569 626 aa12.34□□□□□ -0.43
NIFKP4-201ENST00000567275 DENND5AQ6IQ26 1287 aa12.34□□□□□ -0.43
NIFKP4-201ENST00000567275 USP53Q70EK8 1073 aa12.34□□□□□ -0.43
NIFKP4-201ENST00000567275 TEX2Q8IWB9 1127 aa12.34□□□□□ -0.43
NIFKP4-201ENST00000567275 UBXN4Q92575 508 aa12.34□□□□□ -0.43
NIFKP4-201ENST00000567275 DPF3Q92784 378 aa12.34□□□□□ -0.43
NIFKP4-201ENST00000567275 MKL1Q969V6 931 aa12.34□□□□□ -0.43
NIFKP4-201ENST00000567275 MBD1Q9UIS9 605 aaPredicted RBP12.34□□□□□ -0.43
NIFKP4-201ENST00000567275 WRNQ14191 1432 aaPredicted RBP eCLIP12.34□□□□□ -0.43
NIFKP4-201ENST00000567275 PBRM1Q86U86 1689 aa12.33□□□□□ -0.44
NIFKP4-201ENST00000567275 ARNTLO00327 626 aa12.33□□□□□ -0.44
NIFKP4-201ENST00000567275 MED14OSP0DP75 135 aa12.33□□□□□ -0.44
NIFKP4-201ENST00000567275 WWC2Q6AWC2 1192 aa12.33□□□□□ -0.44
NIFKP4-201ENST00000567275 NETO2Q8NC67 525 aa12.33□□□□□ -0.44
NIFKP4-201ENST00000567275 RCBTB1Q8NDN9 531 aa12.33□□□□□ -0.44
NIFKP4-201ENST00000567275 CHAMP1Q96JM3 812 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms