RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 FAM50BQ9Y247 325 aa19.97■□□□□ 0.79
CDH3-205ENST00000566808 NLRC5Q86WI3 1866 aa19.96■□□□□ 0.79
CDH3-205ENST00000566808 SPTBN4Q9H254 2564 aa19.96■□□□□ 0.79
CDH3-205ENST00000566808 CXCL10P02778 98 aa19.96■□□□□ 0.79
CDH3-205ENST00000566808 TSPY3P0CV98 308 aa19.96■□□□□ 0.79
CDH3-205ENST00000566808 TSPY8P0CW00 308 aa19.96■□□□□ 0.79
CDH3-205ENST00000566808 SELPP16109 830 aa19.96■□□□□ 0.79
CDH3-205ENST00000566808 TDO2P48775 406 aa19.96■□□□□ 0.79
CDH3-205ENST00000566808 NEDD1Q8NHV4 660 aa19.96■□□□□ 0.79
CDH3-205ENST00000566808 BCL11AQ9H165 835 aa19.96■□□□□ 0.79
CDH3-205ENST00000566808 PRKAG3Q9UGI9 489 aa19.96■□□□□ 0.79
CDH3-205ENST00000566808 PRR12Q9ULL5 1215 aa19.96■□□□□ 0.79
CDH3-205ENST00000566808 CACNA1AO00555 2505 aa19.96■□□□□ 0.79
CDH3-205ENST00000566808 CACNA1HO95180 2353 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 ABHD14A-ACY1A0A1B0GW23 586 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 HMMRO75330 724 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 ICAM1P05362 532 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 ZP2Q05996 745 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 RBL2Q08999 1139 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 PTGISQ16647 500 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 TIGD5Q53EQ6 642 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 PPP4R3BQ5MIZ7 849 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 FBXO22Q8NEZ5 403 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 SCFD2Q8WU76 684 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 MRPL38Q96DV4 380 aaKnown RBP19.95■□□□□ 0.78
CDH3-205ENST00000566808 CRBNQ96SW2 442 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 CTNNA3Q9UI47 895 aa19.95■□□□□ 0.78
CDH3-205ENST00000566808 TECTAO75443 2155 aa19.94■□□□□ 0.78
CDH3-205ENST00000566808 RAB11FIP3O75154 756 aa19.94■□□□□ 0.78
CDH3-205ENST00000566808 MCCP23508 829 aa19.94■□□□□ 0.78
CDH3-205ENST00000566808 BAATQ14032 418 aaPredicted RBP19.94■□□□□ 0.78
CDH3-205ENST00000566808 GPNMBQ14956 572 aa19.94■□□□□ 0.78
CDH3-205ENST00000566808 PTPROQ16827 1216 aa19.94■□□□□ 0.78
CDH3-205ENST00000566808 HFE2Q6ZVN8 426 aa19.94■□□□□ 0.78
CDH3-205ENST00000566808 SESTD1Q86VW0 696 aa19.94■□□□□ 0.78
CDH3-205ENST00000566808 RALGAPA2Q2PPJ7 1873 aa19.94■□□□□ 0.78
CDH3-205ENST00000566808 COL4A6Q14031 1691 aa19.94■□□□□ 0.78
CDH3-205ENST00000566808 H3BQ06 376 aaPredicted RBP19.93■□□□□ 0.78
CDH3-205ENST00000566808 GNAT2P19087 354 aa19.93■□□□□ 0.78
CDH3-205ENST00000566808 SNAP25P60880 206 aa19.93■□□□□ 0.78
CDH3-205ENST00000566808 KCTD1Q719H9 257 aa19.93■□□□□ 0.78
CDH3-205ENST00000566808 MFSD14AQ96MC6 490 aa19.93■□□□□ 0.78
CDH3-205ENST00000566808 CTAGE1Q96RT6 745 aa19.93■□□□□ 0.78
CDH3-205ENST00000566808 MPHOSPH6Q99547 160 aaKnown RBP19.93■□□□□ 0.78
CDH3-205ENST00000566808 ATG2AQ2TAZ0 1938 aa19.93■□□□□ 0.78
CDH3-205ENST00000566808 MYO7AQ13402 2215 aa19.92■□□□□ 0.78
CDH3-205ENST00000566808 NBNO60934 754 aa19.92■□□□□ 0.78
CDH3-205ENST00000566808 PDE4BQ07343 736 aa19.92■□□□□ 0.78
CDH3-205ENST00000566808 PDE4DQ08499 809 aa19.92■□□□□ 0.78
CDH3-205ENST00000566808 RCSD1Q6JBY9 416 aa19.92■□□□□ 0.78
CDH3-205ENST00000566808 ADHFE1Q8IWW8 467 aa19.92■□□□□ 0.78
CDH3-205ENST00000566808 APPBP2Q92624 585 aa19.92■□□□□ 0.78
CDH3-205ENST00000566808 C17orf80Q9BSJ5 609 aa19.92■□□□□ 0.78
CDH3-205ENST00000566808 INSL6Q9Y581 213 aa19.92■□□□□ 0.78
CDH3-205ENST00000566808 C19orf67A6NJJ6 358 aa19.91■□□□□ 0.78
CDH3-205ENST00000566808 NFIBO00712 420 aa19.91■□□□□ 0.78
CDH3-205ENST00000566808 GPAA1O43292 621 aa19.91■□□□□ 0.78
CDH3-205ENST00000566808 CHMP4BP1P59074 171 aa19.91■□□□□ 0.78
CDH3-205ENST00000566808 IKBKEQ14164 716 aa19.91■□□□□ 0.78
CDH3-205ENST00000566808 COL19A1Q14993 1142 aa19.91■□□□□ 0.78
CDH3-205ENST00000566808 GDF6Q6KF10 455 aaPredicted RBP19.91■□□□□ 0.78
CDH3-205ENST00000566808 SLC30A10Q6XR72 485 aa19.91■□□□□ 0.78
CDH3-205ENST00000566808 DHX38Q92620 1227 aaKnown RBP19.91■□□□□ 0.78
CDH3-205ENST00000566808 OSBP2Q969R2 916 aa19.91■□□□□ 0.78
CDH3-205ENST00000566808 CHMP4CQ96CF2 233 aa19.91■□□□□ 0.78
CDH3-205ENST00000566808 PABPC5Q96DU9 382 aaKnown RBP19.91■□□□□ 0.78
CDH3-205ENST00000566808 UPF3BQ9BZI7 483 aaKnown RBP19.91■□□□□ 0.78
CDH3-205ENST00000566808 RANBP17Q9H2T7 1088 aaKnown RBP19.91■□□□□ 0.78
CDH3-205ENST00000566808 KIAA1217Q5T5P2 1943 aa19.91■□□□□ 0.78
CDH3-205ENST00000566808 ZFHX2Q9C0A1 2572 aaPredicted RBP19.9■□□□□ 0.78
CDH3-205ENST00000566808 PTPDC1A2A3K4 754 aa19.9■□□□□ 0.78
CDH3-205ENST00000566808 CKBP12277 381 aa19.9■□□□□ 0.78
CDH3-205ENST00000566808 EDNRBP24530 442 aa19.9■□□□□ 0.78
CDH3-205ENST00000566808 TFAP4Q01664 338 aa19.9■□□□□ 0.78
CDH3-205ENST00000566808 COPS5Q92905 334 aa19.9■□□□□ 0.78
CDH3-205ENST00000566808 SAMD11Q96NU1 681 aa19.9■□□□□ 0.78
CDH3-205ENST00000566808 STX8Q9UNK0 236 aa19.9■□□□□ 0.78
CDH3-205ENST00000566808 APPP05067 770 aa19.89■□□□□ 0.77
CDH3-205ENST00000566808 SLC3A2P08195 630 aaKnown RBP19.89■□□□□ 0.77
CDH3-205ENST00000566808 TXNP10599 105 aaKnown RBP19.89■□□□□ 0.77
CDH3-205ENST00000566808 TCTN1Q2MV58 587 aa19.89■□□□□ 0.77
CDH3-205ENST00000566808 FAM117BQ6P1L5 589 aa19.89■□□□□ 0.77
CDH3-205ENST00000566808 RASGRP2Q7LDG7 609 aa19.89■□□□□ 0.77
CDH3-205ENST00000566808 KBTBD3Q8NAB2 608 aa19.89■□□□□ 0.77
CDH3-205ENST00000566808 BANK1Q8NDB2 785 aa19.89■□□□□ 0.77
CDH3-205ENST00000566808 SP7Q8TDD2 431 aaPredicted RBP19.89■□□□□ 0.77
CDH3-205ENST00000566808 ST18O60284 1047 aa19.88■□□□□ 0.77
CDH3-205ENST00000566808 CCDC96Q2M329 555 aa19.88■□□□□ 0.77
CDH3-205ENST00000566808 DNERQ8NFT8 737 aa19.88■□□□□ 0.77
CDH3-205ENST00000566808 POP1Q99575 1024 aaKnown RBP19.88■□□□□ 0.77
CDH3-205ENST00000566808 NACAP1Q9BZK3 213 aa19.88■□□□□ 0.77
CDH3-205ENST00000566808 GTF2IRD1Q9UHL9 959 aa19.88■□□□□ 0.77
CDH3-205ENST00000566808 B4DLN1 442 aa19.87■□□□□ 0.77
CDH3-205ENST00000566808 ZFYP08048 801 aaPredicted RBP19.87■□□□□ 0.77
CDH3-205ENST00000566808 MMP3P08254 477 aa19.87■□□□□ 0.77
CDH3-205ENST00000566808 CALML3P27482 149 aa19.87■□□□□ 0.77
CDH3-205ENST00000566808 IRS1P35568 1242 aa19.87■□□□□ 0.77
CDH3-205ENST00000566808 MRPL12P52815 198 aaKnown RBP19.87■□□□□ 0.77
CDH3-205ENST00000566808 HTRA4P83105 476 aaPredicted RBP19.87■□□□□ 0.77
CDH3-205ENST00000566808 EPC2Q52LR7 807 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms