RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 C1orf162Q8NEQ5 155 aaPredicted RBP7.43□□□□□ -1.22
KARS-208ENST00000566772 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.43□□□□□ -1.22
KARS-208ENST00000566772 CLIP3Q96DZ5 547 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 PSMG3-AS1Q96PY0 264 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 SARGQ9BW04 601 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 UBA5Q9GZZ9 404 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 ACSS3Q9H6R3 686 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 PRDM11Q9NQV5 511 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 ANLNQ9NQW6 1124 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 GPR27Q9NS67 375 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 USP25Q9UHP3 1055 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 RNF112Q9ULX5 631 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 GIT1Q9Y2X7 761 aa7.43□□□□□ -1.22
KARS-208ENST00000566772 TTBK1Q5TCY1 1321 aaPredicted RBP7.43□□□□□ -1.22
KARS-208ENST00000566772 PRDM2Q13029 1718 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.42□□□□□ -1.22
KARS-208ENST00000566772 CCDC189A1A4V9 331 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 PTPDC1A2A3K4 754 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 AURKAO14965 403 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 ADAMTS2O95450 1211 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 CD3EP07766 207 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 CTSKP43235 329 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 DNM2P50570 870 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 OCRLQ01968 901 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 PAK1Q13153 545 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 GRM3Q14832 879 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 OVCH1Q7RTY7 1134 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 PNMA8AQ86V59 439 aaPredicted RBP7.42□□□□□ -1.22
KARS-208ENST00000566772 PJA1Q8NG27 643 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 FBXO41Q8TF61 875 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 LRGUKQ96M69 825 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 CELF4Q9BZC1 486 aaKnown RBP7.42□□□□□ -1.22
KARS-208ENST00000566772 PRDM10Q9NQV6 1147 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 C14orf119Q9NWQ9 140 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 NXF1Q9UBU9 619 aaKnown RBP7.42□□□□□ -1.22
KARS-208ENST00000566772 TAGLN3Q9UI15 199 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 INTUQ9ULD6 942 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 DAGLAQ9Y4D2 1042 aa7.42□□□□□ -1.22
KARS-208ENST00000566772 TOP2AP11388 1531 aaKnown RBP7.42□□□□□ -1.22
KARS-208ENST00000566772 URB2Q14146 1524 aaKnown RBP7.42□□□□□ -1.22
KARS-208ENST00000566772 SH3BP5O60239 455 aa7.41□□□□□ -1.22
KARS-208ENST00000566772 LTFP02788 710 aa7.41□□□□□ -1.22
KARS-208ENST00000566772 SOD2P04179 222 aa7.41□□□□□ -1.22
KARS-208ENST00000566772 IFIT2P09913 472 aaKnown RBP7.41□□□□□ -1.22
KARS-208ENST00000566772 NBPF7P0C2Y1 421 aaPredicted RBP7.41□□□□□ -1.22
KARS-208ENST00000566772 RBP3P10745 1247 aa7.41□□□□□ -1.22
KARS-208ENST00000566772 PLS3P13797 630 aa7.41□□□□□ -1.22
KARS-208ENST00000566772 LPOP22079 712 aaPredicted RBP7.41□□□□□ -1.22
KARS-208ENST00000566772 CYP2C19P33261 490 aa7.41□□□□□ -1.22
KARS-208ENST00000566772 LTBRP36941 435 aa7.41□□□□□ -1.22
KARS-208ENST00000566772 TMEM240Q5SV17 173 aa7.41□□□□□ -1.22
KARS-208ENST00000566772 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.41□□□□□ -1.22
KARS-208ENST00000566772 AGGF1Q8N302 714 aaeCLIP7.41□□□□□ -1.22
KARS-208ENST00000566772 SLC5A5Q92911 643 aa7.41□□□□□ -1.22
KARS-208ENST00000566772 BSDC1Q9NW68 430 aaPredicted RBP7.41□□□□□ -1.22
KARS-208ENST00000566772 DDX20Q9UHI6 824 aaKnown RBP7.41□□□□□ -1.22
KARS-208ENST00000566772 BACE2Q9Y5Z0 518 aa7.41□□□□□ -1.22
KARS-208ENST00000566772 CFTRP13569 1480 aa7.41□□□□□ -1.22
KARS-208ENST00000566772 DYNC1LI2O43237 492 aaPredicted RBP7.4□□□□□ -1.22
KARS-208ENST00000566772 PCDHGA12O60330 932 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 GSNP06396 782 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 IFNGR1P15260 489 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 SESN3P58005 492 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 RAC1P63000 192 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 KRT76Q01546 638 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 PICALMQ13492 652 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 GTF2H3Q13889 308 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 MORC3Q14149 939 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 TESK1Q15569 626 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 ZRSR2Q15696 482 aaKnown RBP7.4□□□□□ -1.22
KARS-208ENST00000566772 ARHGAP29Q52LW3 1261 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 COBLL1Q53SF7 1204 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 BROXQ5VW32 411 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 CREB3L3Q68CJ9 461 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 CWF19L1Q69YN2 538 aaKnown RBP7.4□□□□□ -1.22
KARS-208ENST00000566772 CRTC3Q6UUV7 619 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 CMIPQ8IY22 773 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 SPICE1Q8N0Z3 855 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 FCRL3Q96P31 734 aaPredicted RBP7.4□□□□□ -1.22
KARS-208ENST00000566772 ALG1Q9BT22 464 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 OXSMQ9NWU1 459 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 CLEC1BQ9P126 229 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 RCAN3Q9UKA8 241 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 DAAM1Q9Y4D1 1078 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 PCDHGA9Q9Y5G4 932 aaKnown RBP7.4□□□□□ -1.22
KARS-208ENST00000566772 PCDHGA8Q9Y5G5 932 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 PCDHGA7Q9Y5G6 932 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 PCDHGA6Q9Y5G7 932 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 PCDHGA3Q9Y5H0 932 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 PCDHGA2Q9Y5H1 932 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 WASHC2AQ641Q2 1341 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 RIMBP3CA6NJZ7 1639 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 RIMBP3BA6NNM3 1639 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 RIMBP3Q9UFD9 1639 aa7.4□□□□□ -1.22
KARS-208ENST00000566772 CCDC66A2RUB6 948 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 H3BM21 787 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 APAF1O14727 1248 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 TGM5O43548 720 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 EOMESO95936 686 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 FOSP01100 380 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms