RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 PSMC6P62333 389 aa32.29■■■□□ 2.76
UBFD1-206ENST00000566669 TRDNQ13061 729 aa32.29■■■□□ 2.76
UBFD1-206ENST00000566669 IFIT1BQ5T764 474 aaKnown RBP32.29■■■□□ 2.76
UBFD1-206ENST00000566669 NFRKBQ6P4R8 1299 aa32.29■■■□□ 2.76
UBFD1-206ENST00000566669 FBXO11Q86XK2 927 aa32.29■■■□□ 2.76
UBFD1-206ENST00000566669 DHX16O60231 1041 aaKnown RBP32.28■■■□□ 2.76
UBFD1-206ENST00000566669 MYL3P08590 195 aa32.28■■■□□ 2.76
UBFD1-206ENST00000566669 ACRP10323 421 aa32.28■■■□□ 2.76
UBFD1-206ENST00000566669 TMEM63BQ5T3F8 832 aa32.28■■■□□ 2.76
UBFD1-206ENST00000566669 MAP3K20Q9NYL2 800 aaKnown RBP32.28■■■□□ 2.76
UBFD1-206ENST00000566669 MSRAQ9UJ68 235 aa32.28■■■□□ 2.76
UBFD1-206ENST00000566669 SAMD3Q8N6K7 520 aa32.27■■■□□ 2.76
UBFD1-206ENST00000566669 STXBP2Q15833 593 aa32.26■■■□□ 2.75
UBFD1-206ENST00000566669 TTC22Q5TAA0 569 aa32.26■■■□□ 2.75
UBFD1-206ENST00000566669 PBX4Q9BYU1 374 aa32.26■■■□□ 2.75
UBFD1-206ENST00000566669 U3KPZ7 1027 aaPredicted RBP32.26■■■□□ 2.75
UBFD1-206ENST00000566669 PTGS1P23219 599 aa32.25■■■□□ 2.75
UBFD1-206ENST00000566669 QRICH1Q2TAL8 776 aa32.25■■■□□ 2.75
UBFD1-206ENST00000566669 SYTL5Q8TDW5 730 aaPredicted RBP32.25■■■□□ 2.75
UBFD1-206ENST00000566669 AMNQ9BXJ7 453 aa32.25■■■□□ 2.75
UBFD1-206ENST00000566669 RFC2P35250 354 aa32.24■■■□□ 2.75
UBFD1-206ENST00000566669 CCL23P55773 120 aa32.24■■■□□ 2.75
UBFD1-206ENST00000566669 GRIN2CQ14957 1233 aa32.24■■■□□ 2.75
UBFD1-206ENST00000566669 RMDN3Q96TC7 470 aa32.24■■■□□ 2.75
UBFD1-206ENST00000566669 WNT8AQ9H1J5 351 aa32.24■■■□□ 2.75
UBFD1-206ENST00000566669 CPVLQ9H3G5 476 aa32.24■■■□□ 2.75
UBFD1-206ENST00000566669 JMJD4Q9H9V9 463 aa32.24■■■□□ 2.75
UBFD1-206ENST00000566669 CCDC62Q6P9F0 684 aa32.23■■■□□ 2.75
UBFD1-206ENST00000566669 GAS2L1Q99501 681 aaPredicted RBP32.23■■■□□ 2.75
UBFD1-206ENST00000566669 UMODL1Q5DID0 1318 aa32.23■■■□□ 2.75
UBFD1-206ENST00000566669 PITPNM1O00562 1244 aa32.22■■■□□ 2.75
UBFD1-206ENST00000566669 GH1P01241 217 aa32.22■■■□□ 2.75
UBFD1-206ENST00000566669 NBPF20Q3BBV1 942 aa32.22■■■□□ 2.75
UBFD1-206ENST00000566669 TRMT13Q9NUP7 481 aaKnown RBP32.22■■■□□ 2.75
UBFD1-206ENST00000566669 ERICH2A1L162 156 aa32.21■■■□□ 2.75
UBFD1-206ENST00000566669 EIF3JO75822 258 aaKnown RBP32.21■■■□□ 2.75
UBFD1-206ENST00000566669 GHRHRQ02643 423 aa32.21■■■□□ 2.75
UBFD1-206ENST00000566669 BFSP2Q13515 415 aa32.21■■■□□ 2.75
UBFD1-206ENST00000566669 SART3Q15020 963 aaKnown RBP32.21■■■□□ 2.75
UBFD1-206ENST00000566669 SEC23AQ15436 765 aa32.21■■■□□ 2.75
UBFD1-206ENST00000566669 FAM47CQ5HY64 1035 aa32.21■■■□□ 2.75
UBFD1-206ENST00000566669 ARHGEF16Q5VV41 709 aa32.21■■■□□ 2.75
UBFD1-206ENST00000566669 SLC4A7Q9Y6M7 1214 aa32.21■■■□□ 2.75
UBFD1-206ENST00000566669 KLRF2D3W0D1 207 aa32.2■■■□□ 2.75
UBFD1-206ENST00000566669 ACTN1P12814 892 aa32.2■■■□□ 2.75
UBFD1-206ENST00000566669 OTOP2Q7RTS6 562 aa32.2■■■□□ 2.75
UBFD1-206ENST00000566669 RETREG2Q8NC44 543 aa32.2■■■□□ 2.75
UBFD1-206ENST00000566669 TAAR1Q96RJ0 339 aa32.2■■■□□ 2.75
UBFD1-206ENST00000566669 VAT1LQ9HCJ6 419 aa32.2■■■□□ 2.75
UBFD1-206ENST00000566669 CDH23Q9H251 3354 aa32.19■■■□□ 2.74
UBFD1-206ENST00000566669 ZBTB5O15062 677 aa32.19■■■□□ 2.74
UBFD1-206ENST00000566669 KCNV1Q6PIU1 500 aa32.19■■■□□ 2.74
UBFD1-206ENST00000566669 CCDC155Q8N6L0 562 aa32.19■■■□□ 2.74
UBFD1-206ENST00000566669 MTMR8Q96EF0 704 aa32.19■■■□□ 2.74
UBFD1-206ENST00000566669 SLC28A3Q9HAS3 691 aa32.19■■■□□ 2.74
UBFD1-206ENST00000566669 NOD1Q9Y239 953 aa32.19■■■□□ 2.74
UBFD1-206ENST00000566669 SUPT16HQ9Y5B9 1047 aaKnown RBP32.19■■■□□ 2.74
UBFD1-206ENST00000566669 SCN10AQ9Y5Y9 1956 aa32.19■■■□□ 2.74
UBFD1-206ENST00000566669 GSPT1P15170 499 aaKnown RBP32.18■■■□□ 2.74
UBFD1-206ENST00000566669 CASTP20810 708 aaKnown RBP32.18■■■□□ 2.74
UBFD1-206ENST00000566669 HSD17B4P51659 736 aa32.18■■■□□ 2.74
UBFD1-206ENST00000566669 SEPT14Q6ZU15 432 aa32.18■■■□□ 2.74
UBFD1-206ENST00000566669 RALYLQ86SE5 291 aaKnown RBP32.18■■■□□ 2.74
UBFD1-206ENST00000566669 EMID1Q96A84 441 aaPredicted RBP32.18■■■□□ 2.74
UBFD1-206ENST00000566669 CXXC1Q9P0U4 656 aaPredicted RBP32.18■■■□□ 2.74
UBFD1-206ENST00000566669 ARIH2O95376 493 aa32.17■■■□□ 2.74
UBFD1-206ENST00000566669 CYP2C9P11712 490 aa32.17■■■□□ 2.74
UBFD1-206ENST00000566669 SESTD1Q86VW0 696 aa32.17■■■□□ 2.74
UBFD1-206ENST00000566669 TBC1D5Q92609 795 aa32.17■■■□□ 2.74
UBFD1-206ENST00000566669 COPS5Q92905 334 aa32.17■■■□□ 2.74
UBFD1-206ENST00000566669 COL25A1Q9BXS0 654 aaPredicted RBP32.17■■■□□ 2.74
UBFD1-206ENST00000566669 COL20A1Q9P218 1284 aa32.17■■■□□ 2.74
UBFD1-206ENST00000566669 PALM3A6NDB9 673 aaPredicted RBP32.16■■■□□ 2.74
UBFD1-206ENST00000566669 GRXCR1A8MXD5 290 aa32.16■■■□□ 2.74
UBFD1-206ENST00000566669 CFBP00751 764 aa32.16■■■□□ 2.74
UBFD1-206ENST00000566669 NR3C2P08235 984 aa32.16■■■□□ 2.74
UBFD1-206ENST00000566669 PDE4AP27815 886 aa32.16■■■□□ 2.74
UBFD1-206ENST00000566669 PBX2P40425 430 aa32.16■■■□□ 2.74
UBFD1-206ENST00000566669 DGKDQ16760 1214 aa32.16■■■□□ 2.74
UBFD1-206ENST00000566669 SYMPKQ92797 1274 aaKnown RBP32.16■■■□□ 2.74
UBFD1-206ENST00000566669 KATNAL1Q9BW62 490 aa32.16■■■□□ 2.74
UBFD1-206ENST00000566669 PXMP2Q9NR77 195 aa32.16■■■□□ 2.74
UBFD1-206ENST00000566669 MAD2L2Q9UI95 211 aa32.16■■■□□ 2.74
UBFD1-206ENST00000566669 PCDHA1Q9Y5I3 950 aa32.16■■■□□ 2.74
UBFD1-206ENST00000566669 EYSQ5T1H1 3165 aa32.15■■■□□ 2.74
UBFD1-206ENST00000566669 PARNO95453 639 aaKnown RBP32.15■■■□□ 2.74
UBFD1-206ENST00000566669 MMP3P08254 477 aa32.15■■■□□ 2.74
UBFD1-206ENST00000566669 CHMLP26374 656 aa32.15■■■□□ 2.74
UBFD1-206ENST00000566669 ARHGAP1Q07960 439 aa32.15■■■□□ 2.74
UBFD1-206ENST00000566669 LAMC2Q13753 1193 aa32.15■■■□□ 2.74
UBFD1-206ENST00000566669 NCOA7Q8NI08 942 aa32.15■■■□□ 2.74
UBFD1-206ENST00000566669 CAGE1Q8TC20 777 aa32.15■■■□□ 2.74
UBFD1-206ENST00000566669 AFG1LQ8WV93 481 aa32.15■■■□□ 2.74
UBFD1-206ENST00000566669 SCLYQ96I15 445 aa32.15■■■□□ 2.74
UBFD1-206ENST00000566669 PCDHA11Q9Y5I1 949 aa32.15■■■□□ 2.74
UBFD1-206ENST00000566669 STOX1Q6ZVD7 989 aa32.14■■■□□ 2.74
UBFD1-206ENST00000566669 CYB5R4Q7L1T6 521 aa32.14■■■□□ 2.74
UBFD1-206ENST00000566669 STAG2Q8N3U4 1231 aa32.14■■■□□ 2.74
UBFD1-206ENST00000566669 IL25Q9H293 177 aa32.14■■■□□ 2.74
UBFD1-206ENST00000566669 ZBBXA8MT70 800 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms