RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 HSP90AA1P07900 732 aaKnown RBP13.19□□□□□ -0.3
KARS-207ENST00000566560 FDPSP14324 419 aaKnown RBP13.19□□□□□ -0.3
KARS-207ENST00000566560 XBP1P17861 261 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 ANP32AP39687 249 aaKnown RBP13.19□□□□□ -0.3
KARS-207ENST00000566560 ADCY7P51828 1080 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 FOSBP53539 338 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 PRKCZQ05513 592 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 BECN1Q14457 450 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 RNF207Q6ZRF8 634 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 CUL5Q93034 780 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 NUDT12Q9BQG2 462 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 SH3GLB2Q9NR46 395 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 CYP39A1Q9NYL5 469 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 SMC3Q9UQE7 1217 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 KIF3AQ9Y496 699 aa13.19□□□□□ -0.3
KARS-207ENST00000566560 MCM3APO60318 1980 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 PGK2P07205 417 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 CALML3P27482 149 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 HOXD10P28358 340 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 GJB2P29033 226 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 RGS2P41220 211 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 RPS6P62753 249 aaKnown RBP13.18□□□□□ -0.3
KARS-207ENST00000566560 MAP2K5Q13163 448 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 MORN1Q5T089 497 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 SHISA4Q96DD7 197 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 INTS4Q96HW7 963 aaKnown RBP13.18□□□□□ -0.3
KARS-207ENST00000566560 APBA2Q99767 749 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 PSTPIP2Q9H939 334 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 SRRDQ9UH36 339 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 TRIM17Q9Y577 477 aa13.18□□□□□ -0.3
KARS-207ENST00000566560 SMCO2A6NFE2 343 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 GCOM1H8Y6P7 765 aaPredicted RBP13.17□□□□□ -0.3
KARS-207ENST00000566560 POLR2MP0CAP2 368 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 HOXA13P31271 388 aaPredicted RBP13.17□□□□□ -0.3
KARS-207ENST00000566560 FLT3LGP49771 235 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 HSD17B4P51659 736 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 NLRP5P59047 1200 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 GHRHRQ02643 423 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 BAATQ14032 418 aaPredicted RBP13.17□□□□□ -0.3
KARS-207ENST00000566560 TRIM29Q14134 588 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 OTOP1Q7RTM1 612 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 DPP9Q86TI2 863 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 FAM177A1Q8N128 213 aaPredicted RBP13.17□□□□□ -0.3
KARS-207ENST00000566560 MAF1Q9H063 256 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 GLT8D2Q9H1C3 349 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 C6orf50Q9HD87 102 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 RIC8AQ9NPQ8 531 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 SLC5A4Q9NY91 659 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 GABRQQ9UN88 632 aa13.17□□□□□ -0.3
KARS-207ENST00000566560 DNAJC25-GNG10A0A024R161 153 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 PIK3CDO00329 1044 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 COBLO75128 1261 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 CYP2B6P20813 491 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 GNA11P29992 359 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 MRPL12P52815 198 aaKnown RBP13.16□□□□□ -0.3
KARS-207ENST00000566560 PRMT2P55345 433 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 UBE2SQ16763 222 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 USP17L6PQ6QN14 398 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 CTU1Q7Z7A3 348 aaKnown RBP13.16□□□□□ -0.3
KARS-207ENST00000566560 REXO1Q8N1G1 1221 aaKnown RBP13.16□□□□□ -0.3
KARS-207ENST00000566560 SAMD3Q8N6K7 520 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 FAM133AQ8N9E0 248 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 RGS22Q8NE09 1264 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 OXER1Q8TDS5 423 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 SYTL5Q8TDW5 730 aaPredicted RBP13.16□□□□□ -0.3
KARS-207ENST00000566560 TBC1D5Q92609 795 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 C8orf76Q96K31 380 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 GJB4Q9NTQ9 266 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 MAP3K20Q9NYL2 800 aaKnown RBP13.16□□□□□ -0.3
KARS-207ENST00000566560 COL20A1Q9P218 1284 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 GJD2Q9UKL4 321 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 KCNJ14Q9UNX9 436 aa13.16□□□□□ -0.3
KARS-207ENST00000566560 SPDYE3A6NKU9 549 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 DPYSL4O14531 572 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 MEIS2O14770 477 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 HOXC6P09630 235 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 CNTN2Q02246 1040 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 FCHSD1Q86WN1 690 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 DAGLBQ8NCG7 672 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 RAET1EQ8TD07 263 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 BICD2Q8TD16 824 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 PTCD2Q8WV60 388 aaKnown RBP13.15□□□□□ -0.3
KARS-207ENST00000566560 USP6NLQ92738 828 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 PURBQ96QR8 312 aaKnown RBP13.15□□□□□ -0.3
KARS-207ENST00000566560 PHF20Q9BVI0 1012 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 BRMS1Q9HCU9 246 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 PRDM10Q9NQV6 1147 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 ADD3Q9UEY8 706 aaKnown RBP13.15□□□□□ -0.3
KARS-207ENST00000566560 PCDHA4Q9UN74 947 aa13.15□□□□□ -0.3
KARS-207ENST00000566560 MYH7BA7E2Y1 1941 aa13.14□□□□□ -0.31
KARS-207ENST00000566560 GUCY1B3Q02153 619 aa13.14□□□□□ -0.31
KARS-207ENST00000566560 AP3B2Q13367 1082 aa13.14□□□□□ -0.31
KARS-207ENST00000566560 IRF5Q13568 498 aa13.14□□□□□ -0.31
KARS-207ENST00000566560 ZNF792Q3KQV3 632 aa13.14□□□□□ -0.31
KARS-207ENST00000566560 KRT40Q6A162 431 aa13.14□□□□□ -0.31
KARS-207ENST00000566560 GALNT17Q6IS24 598 aa13.14□□□□□ -0.31
KARS-207ENST00000566560 NPLOC4Q8TAT6 608 aa13.14□□□□□ -0.31
KARS-207ENST00000566560 RASGRP4Q8TDF6 673 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms