RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 FAM47CQ5HY64 1035 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 VPS53Q5VIR6 699 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 NFRKBQ6P4R8 1299 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 SPRED2Q7Z698 418 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 HERC6Q8IVU3 1022 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 SMC5Q8IY18 1101 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 ARNTL2Q8WYA1 636 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 FAM122AQ96E09 287 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 C1QTNF1Q9BXJ1 281 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 EPHX3Q9H6B9 360 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 GPCPD1Q9NPB8 672 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 GPHNQ9NQX3 736 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-214ENST00000566230 FRMPD2Q68DX3 1309 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-214ENST00000566230 EDNRBP24530 442 aa15.77■□□□□ 0.12
COMMD4-214ENST00000566230 TMEM47Q9BQJ4 181 aa15.77■□□□□ 0.12
COMMD4-214ENST00000566230 COL4A4P53420 1690 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-214ENST00000566230 NKRFO15226 690 aaKnown RBP eCLIP15.76■□□□□ 0.11
COMMD4-214ENST00000566230 KPNA6O60684 536 aa15.76■□□□□ 0.11
COMMD4-214ENST00000566230 LPXNO60711 386 aa15.76■□□□□ 0.11
COMMD4-214ENST00000566230 IGHDP01880 384 aa15.76■□□□□ 0.11
COMMD4-214ENST00000566230 TOP1P11387 765 aaKnown RBP15.76■□□□□ 0.11
COMMD4-214ENST00000566230 RPS6P62753 249 aaKnown RBP15.76■□□□□ 0.11
COMMD4-214ENST00000566230 PTPN11Q06124 597 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-214ENST00000566230 PDE4DQ08499 809 aa15.76■□□□□ 0.11
COMMD4-214ENST00000566230 GRB10Q13322 594 aa15.76■□□□□ 0.11
COMMD4-214ENST00000566230 GPNMBQ14956 572 aa15.76■□□□□ 0.11
COMMD4-214ENST00000566230 PPP2R5BQ15173 497 aa15.76■□□□□ 0.11
COMMD4-214ENST00000566230 ALX1Q15699 326 aa15.76■□□□□ 0.11
COMMD4-214ENST00000566230 RNF207Q6ZRF8 634 aa15.76■□□□□ 0.11
COMMD4-214ENST00000566230 RETREG2Q8NC44 543 aa15.76■□□□□ 0.11
COMMD4-214ENST00000566230 CTAGE1Q96RT6 745 aa15.76■□□□□ 0.11
COMMD4-214ENST00000566230 FTOQ9C0B1 505 aaKnown RBP eCLIP15.76■□□□□ 0.11
COMMD4-214ENST00000566230 COG5Q9UP83 839 aa15.76■□□□□ 0.11
COMMD4-214ENST00000566230 KIAA1217Q5T5P2 1943 aa15.75■□□□□ 0.11
COMMD4-214ENST00000566230 ARIH2O95376 493 aa15.75■□□□□ 0.11
COMMD4-214ENST00000566230 TXNP10599 105 aaKnown RBP15.75■□□□□ 0.11
COMMD4-214ENST00000566230 IRX6P78412 446 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-214ENST00000566230 BRDTQ58F21 947 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-214ENST00000566230 SCFD2Q8WU76 684 aa15.75■□□□□ 0.11
COMMD4-214ENST00000566230 LRFN3Q9BTN0 628 aa15.75■□□□□ 0.11
COMMD4-214ENST00000566230 TCP11L1Q9NUJ3 509 aa15.75■□□□□ 0.11
COMMD4-214ENST00000566230 LCHNA4D1U4 455 aa15.74■□□□□ 0.11
COMMD4-214ENST00000566230 KIF28PB7ZC32 967 aa15.74■□□□□ 0.11
COMMD4-214ENST00000566230 RBAK-RBAKDNI3L0D1 243 aa15.74■□□□□ 0.11
COMMD4-214ENST00000566230 PDHBP11177 359 aa15.74■□□□□ 0.11
COMMD4-214ENST00000566230 BFSP2Q13515 415 aa15.74■□□□□ 0.11
COMMD4-214ENST00000566230 CCDC62Q6P9F0 684 aa15.74■□□□□ 0.11
COMMD4-214ENST00000566230 TMCO2Q7Z6W1 182 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-214ENST00000566230 DNERQ8NFT8 737 aa15.74■□□□□ 0.11
COMMD4-214ENST00000566230 KHSRPQ92945 711 aaKnown RBP eCLIP15.74■□□□□ 0.11
COMMD4-214ENST00000566230 MYH7BA7E2Y1 1941 aa15.74■□□□□ 0.11
COMMD4-214ENST00000566230 RAD50Q92878 1312 aa15.73■□□□□ 0.11
COMMD4-214ENST00000566230 SALL3Q9BXA9 1300 aa15.73■□□□□ 0.11
COMMD4-214ENST00000566230 BAIAP3O94812 1187 aa15.73■□□□□ 0.11
COMMD4-214ENST00000566230 FGAP02671 866 aa15.73■□□□□ 0.11
COMMD4-214ENST00000566230 MX1P20591 662 aa15.73■□□□□ 0.11
COMMD4-214ENST00000566230 ZNF543Q08ER8 600 aa15.73■□□□□ 0.11
COMMD4-214ENST00000566230 PTGISQ16647 500 aa15.73■□□□□ 0.11
COMMD4-214ENST00000566230 RRP12Q5JTH9 1297 aaKnown RBP15.73■□□□□ 0.11
COMMD4-214ENST00000566230 GDF6Q6KF10 455 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-214ENST00000566230 HLA-CQ95604 372 aa15.73■□□□□ 0.11
COMMD4-214ENST00000566230 TOMM22Q9NS69 142 aa15.73■□□□□ 0.11
COMMD4-214ENST00000566230 PIEZO1Q92508 2521 aa15.72■□□□□ 0.11
COMMD4-214ENST00000566230 WDR19Q8NEZ3 1342 aa15.72■□□□□ 0.11
COMMD4-214ENST00000566230 MUC6Q6W4X9 2439 aa15.72■□□□□ 0.11
COMMD4-214ENST00000566230 SNHG28P0DPA3 235 aa15.72■□□□□ 0.11
COMMD4-214ENST00000566230 HOXD11P31277 338 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-214ENST00000566230 CHMP4BP1P59074 171 aa15.72■□□□□ 0.11
COMMD4-214ENST00000566230 WDR5P61964 334 aaKnown RBP15.72■□□□□ 0.11
COMMD4-214ENST00000566230 TCTN1Q2MV58 587 aa15.72■□□□□ 0.11
COMMD4-214ENST00000566230 AFG1LQ8WV93 481 aa15.72■□□□□ 0.11
COMMD4-214ENST00000566230 TBC1D5Q92609 795 aa15.72■□□□□ 0.11
COMMD4-214ENST00000566230 DHX38Q92620 1227 aaKnown RBP15.72■□□□□ 0.11
COMMD4-214ENST00000566230 KAT2BQ92831 832 aa15.72■□□□□ 0.11
COMMD4-214ENST00000566230 PNMA2Q9UL42 364 aa15.72■□□□□ 0.11
COMMD4-214ENST00000566230 NOD1Q9Y239 953 aa15.72■□□□□ 0.11
COMMD4-214ENST00000566230 MYH6P13533 1939 aa15.71■□□□□ 0.11
COMMD4-214ENST00000566230 DEFB103AP81534 67 aa15.71■□□□□ 0.11
COMMD4-214ENST00000566230 NUCB1Q02818 461 aa15.71■□□□□ 0.11
COMMD4-214ENST00000566230 ARHGAP1Q07960 439 aa15.71■□□□□ 0.11
COMMD4-214ENST00000566230 B4GALNT3Q6L9W6 998 aa15.71■□□□□ 0.11
COMMD4-214ENST00000566230 SESTD1Q86VW0 696 aa15.71■□□□□ 0.11
COMMD4-214ENST00000566230 CHD1LQ86WJ1 897 aa15.71■□□□□ 0.11
COMMD4-214ENST00000566230 RGS22Q8NE09 1264 aa15.71■□□□□ 0.11
COMMD4-214ENST00000566230 CAGE1Q8TC20 777 aa15.71■□□□□ 0.11
COMMD4-214ENST00000566230 AFAP1L1Q8TED9 768 aa15.71■□□□□ 0.11
COMMD4-214ENST00000566230 MPHOSPH6Q99547 160 aaKnown RBP15.71■□□□□ 0.11
COMMD4-214ENST00000566230 C11orf16Q9NQ32 467 aa15.71■□□□□ 0.11
COMMD4-214ENST00000566230 HELLSQ9NRZ9 838 aa15.71■□□□□ 0.11
COMMD4-214ENST00000566230 SIP14410 1827 aa15.71■□□□□ 0.1
COMMD4-214ENST00000566230 MMP3P08254 477 aa15.7■□□□□ 0.1
COMMD4-214ENST00000566230 SELPP16109 830 aa15.7■□□□□ 0.1
COMMD4-214ENST00000566230 KCNJ6P48051 423 aa15.7■□□□□ 0.1
COMMD4-214ENST00000566230 LY6KQ17RY6 165 aa15.7■□□□□ 0.1
COMMD4-214ENST00000566230 GDPD5Q8WTR4 605 aa15.7■□□□□ 0.1
COMMD4-214ENST00000566230 FAM227BQ96M60 508 aa15.7■□□□□ 0.1
COMMD4-214ENST00000566230 TTC14Q96N46 770 aa15.7■□□□□ 0.1
COMMD4-214ENST00000566230 CPVLQ9H3G5 476 aa15.7■□□□□ 0.1
COMMD4-214ENST00000566230 CD320Q9NPF0 282 aa15.7■□□□□ 0.1
COMMD4-214ENST00000566230 LMCD1Q9NZU5 365 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms