RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 ANO3Q9BYT9 981 aa16.92■□□□□ 0.3
SPG7-213ENST00000566221 TMEM260Q9NX78 707 aa16.92■□□□□ 0.3
SPG7-213ENST00000566221 FRMPD4Q14CM0 1322 aa16.92■□□□□ 0.3
SPG7-213ENST00000566221 CCDC194A0A1B0GVG4 234 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 ADAMTS3O15072 1205 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 ZSCAN22P10073 491 aaPredicted RBP16.91■□□□□ 0.3
SPG7-213ENST00000566221 NUCB2P80303 420 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 ARHGEF6Q15052 776 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 NONOQ15233 471 aaKnown RBP eCLIP16.91■□□□□ 0.3
SPG7-213ENST00000566221 MORN1Q5T089 497 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 NOSTRINQ8IVI9 506 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 FAM133AQ8N9E0 248 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 DNERQ8NFT8 737 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 CD99L2Q8TCZ2 262 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 ZNF296Q8WUU4 475 aaPredicted RBP16.91■□□□□ 0.3
SPG7-213ENST00000566221 ARHGAP39Q9C0H5 1083 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 SLC5A4Q9NY91 659 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 COL20A1Q9P218 1284 aa16.91■□□□□ 0.3
SPG7-213ENST00000566221 ADD3Q9UEY8 706 aaKnown RBP16.91■□□□□ 0.3
SPG7-213ENST00000566221 KIF28PB7ZC32 967 aa16.9■□□□□ 0.3
SPG7-213ENST00000566221 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
SPG7-213ENST00000566221 GNRH1P01148 92 aa16.9■□□□□ 0.3
SPG7-213ENST00000566221 PGK2P07205 417 aa16.9■□□□□ 0.3
SPG7-213ENST00000566221 CTGFP29279 349 aa16.9■□□□□ 0.3
SPG7-213ENST00000566221 MAP2K5Q13163 448 aa16.9■□□□□ 0.3
SPG7-213ENST00000566221 PKP1Q13835 747 aa16.9■□□□□ 0.3
SPG7-213ENST00000566221 RMDN3Q96TC7 470 aa16.9■□□□□ 0.3
SPG7-213ENST00000566221 NUDT12Q9BQG2 462 aa16.9■□□□□ 0.3
SPG7-213ENST00000566221 RPTORQ8N122 1335 aa16.9■□□□□ 0.3
SPG7-213ENST00000566221 LOC102724159A0A0B4J2E5 919 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 TNRC18O15417 2968 aaPredicted RBP16.89■□□□□ 0.29
SPG7-213ENST00000566221 BRD1O95696 1058 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 SREBF1P36956 1147 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 RGS2P41220 211 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 CNTN2Q02246 1040 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 RESTQ13127 1097 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 PWP2Q15269 919 aaKnown RBP16.89■□□□□ 0.29
SPG7-213ENST00000566221 ARHGEF16Q5VV41 709 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 PIK3AP1Q6ZUJ8 805 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 DPP9Q86TI2 863 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 FERMT3Q86UX7 667 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 NSUN6Q8TEA1 469 aaKnown RBP16.89■□□□□ 0.29
SPG7-213ENST00000566221 PGBD1Q96JS3 809 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 TAAR1Q96RJ0 339 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 MPHOSPH6Q99547 160 aaKnown RBP16.89■□□□□ 0.29
SPG7-213ENST00000566221 APBA2Q99767 749 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 ZSCAN16Q9H4T2 348 aaPredicted RBP16.89■□□□□ 0.29
SPG7-213ENST00000566221 PXMP2Q9NR77 195 aa16.89■□□□□ 0.29
SPG7-213ENST00000566221 DIS3Q9Y2L1 958 aaKnown RBP16.89■□□□□ 0.29
SPG7-213ENST00000566221 B4DLN1 442 aa16.88■□□□□ 0.29
SPG7-213ENST00000566221 F13A1P00488 732 aa16.88■□□□□ 0.29
SPG7-213ENST00000566221 HOXC6P09630 235 aa16.88■□□□□ 0.29
SPG7-213ENST00000566221 HOXD10P28358 340 aa16.88■□□□□ 0.29
SPG7-213ENST00000566221 ALDH5A1P51649 535 aaPredicted RBP16.88■□□□□ 0.29
SPG7-213ENST00000566221 ZNF792Q3KQV3 632 aa16.88■□□□□ 0.29
SPG7-213ENST00000566221 ZNF467Q7Z7K2 595 aaPredicted RBP16.88■□□□□ 0.29
SPG7-213ENST00000566221 USP6NLQ92738 828 aa16.88■□□□□ 0.29
SPG7-213ENST00000566221 CHMP5Q9NZZ3 219 aa16.88■□□□□ 0.29
SPG7-213ENST00000566221 SOWAHBA6NEL2 793 aa16.87■□□□□ 0.29
SPG7-213ENST00000566221 COBLO75128 1261 aa16.87■□□□□ 0.29
SPG7-213ENST00000566221 EIF2AK2P19525 551 aaKnown RBP16.87■□□□□ 0.29
SPG7-213ENST00000566221 ARHGAP4P98171 946 aa16.87■□□□□ 0.29
SPG7-213ENST00000566221 TBCKQ8TEA7 893 aa16.87■□□□□ 0.29
SPG7-213ENST00000566221 FGD4Q96M96 766 aa16.87■□□□□ 0.29
SPG7-213ENST00000566221 PURBQ96QR8 312 aaKnown RBP16.87■□□□□ 0.29
SPG7-213ENST00000566221 IWS1Q96ST2 819 aa16.87■□□□□ 0.29
SPG7-213ENST00000566221 PDCD2LQ9BRP1 358 aa16.87■□□□□ 0.29
SPG7-213ENST00000566221 GJD2Q9UKL4 321 aa16.87■□□□□ 0.29
SPG7-213ENST00000566221 NOL7Q9UMY1 257 aaKnown RBP16.87■□□□□ 0.29
SPG7-213ENST00000566221 ASTN1O14525 1302 aa16.87■□□□□ 0.29
SPG7-213ENST00000566221 FAM205CA6NFA0 338 aa16.86■□□□□ 0.29
SPG7-213ENST00000566221 ASB14A6NK59 587 aa16.86■□□□□ 0.29
SPG7-213ENST00000566221 CCND2P30279 289 aa16.86■□□□□ 0.29
SPG7-213ENST00000566221 TRAPPC10P48553 1259 aa16.86■□□□□ 0.29
SPG7-213ENST00000566221 PGM5Q15124 567 aa16.86■□□□□ 0.29
SPG7-213ENST00000566221 INF2Q27J81 1249 aa16.86■□□□□ 0.29
SPG7-213ENST00000566221 EARS2Q5JPH6 523 aaKnown RBP16.86■□□□□ 0.29
SPG7-213ENST00000566221 FOXD4L5Q5VV16 416 aaPredicted RBP16.86■□□□□ 0.29
SPG7-213ENST00000566221 PCNX4Q63HM2 1172 aa16.86■□□□□ 0.29
SPG7-213ENST00000566221 XRRA1Q6P2D8 792 aa16.86■□□□□ 0.29
SPG7-213ENST00000566221 NEK8Q86SG6 692 aa16.86■□□□□ 0.29
SPG7-213ENST00000566221 CRYGNQ8WXF5 182 aa16.86■□□□□ 0.29
SPG7-213ENST00000566221 FOXD4L4Q8WXT5 416 aaPredicted RBP16.86■□□□□ 0.29
SPG7-213ENST00000566221 SRRDQ9UH36 339 aa16.86■□□□□ 0.29
SPG7-213ENST00000566221 ZDHHC9Q9Y397 364 aa16.86■□□□□ 0.29
SPG7-213ENST00000566221 DOCK5Q9H7D0 1870 aa16.85■□□□□ 0.29
SPG7-213ENST00000566221 XRCC5P13010 732 aaKnown RBP16.85■□□□□ 0.29
SPG7-213ENST00000566221 EDNRBP24530 442 aa16.85■□□□□ 0.29
SPG7-213ENST00000566221 PRMT2P55345 433 aa16.85■□□□□ 0.29
SPG7-213ENST00000566221 UBXN2AP68543 259 aa16.85■□□□□ 0.29
SPG7-213ENST00000566221 CAP1Q01518 475 aa16.85■□□□□ 0.29
SPG7-213ENST00000566221 PRKCZQ05513 592 aa16.85■□□□□ 0.29
SPG7-213ENST00000566221 RILPL1Q5EBL4 403 aa16.85■□□□□ 0.29
SPG7-213ENST00000566221 MYSM1Q5VVJ2 828 aa16.85■□□□□ 0.29
SPG7-213ENST00000566221 MSL3Q8N5Y2 521 aaKnown RBP16.85■□□□□ 0.29
SPG7-213ENST00000566221 IL31RAQ8NI17 732 aa16.85■□□□□ 0.29
SPG7-213ENST00000566221 MAML3Q96JK9 1138 aa16.85■□□□□ 0.29
SPG7-213ENST00000566221 NAP1L4Q99733 375 aaKnown RBP16.85■□□□□ 0.29
SPG7-213ENST00000566221 ATP6V1DQ9Y5K8 247 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms