RNA–Protein interactions for RNA: ENST00000566133.1

FANCA-219, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-219ENST00000566133 LCTP09848 1927 aa13.15□□□□□ -0.3
FANCA-219ENST00000566133 PARP1P09874 1014 aaKnown RBP13.14□□□□□ -0.31
FANCA-219ENST00000566133 EDNRBP24530 442 aa13.14□□□□□ -0.31
FANCA-219ENST00000566133 TTLL4Q14679 1199 aa13.14□□□□□ -0.31
FANCA-219ENST00000566133 PPP2R5BQ15173 497 aa13.14□□□□□ -0.31
FANCA-219ENST00000566133 CDC37Q16543 378 aaPredicted RBP13.14□□□□□ -0.31
FANCA-219ENST00000566133 NBPF20Q3BBV1 942 aa13.14□□□□□ -0.31
FANCA-219ENST00000566133 FAM47CQ5HY64 1035 aa13.14□□□□□ -0.31
FANCA-219ENST00000566133 SEPT14Q6ZU15 432 aa13.14□□□□□ -0.31
FANCA-219ENST00000566133 MCF2L2Q86YR7 1114 aa13.14□□□□□ -0.31
FANCA-219ENST00000566133 ENAHQ8N8S7 591 aaPredicted RBP13.14□□□□□ -0.31
FANCA-219ENST00000566133 SCLYQ96I15 445 aa13.14□□□□□ -0.31
FANCA-219ENST00000566133 MTIF3Q9H2K0 278 aaKnown RBP13.14□□□□□ -0.31
FANCA-219ENST00000566133 TRMT13Q9NUP7 481 aaKnown RBP13.14□□□□□ -0.31
FANCA-219ENST00000566133 CXXC1Q9P0U4 656 aaPredicted RBP13.14□□□□□ -0.31
FANCA-219ENST00000566133 A6NJR5 290 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 KPNA6O60684 536 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 CYP2C9P11712 490 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 CHMP4BP1P59074 171 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 QRICH1Q2TAL8 776 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 ASPRV1Q53RT3 343 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 FBXO11Q86XK2 927 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 SYTL5Q8TDW5 730 aaPredicted RBP13.13□□□□□ -0.31
FANCA-219ENST00000566133 NSUN6Q8TEA1 469 aaKnown RBP13.13□□□□□ -0.31
FANCA-219ENST00000566133 PPP1R13LQ8WUF5 828 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 UBAC1Q9BSL1 405 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 MAF1Q9H063 256 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 CNNM2Q9H8M5 875 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 JMJD4Q9H9V9 463 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 MRPL11Q9Y3B7 192 aaKnown RBP13.13□□□□□ -0.31
FANCA-219ENST00000566133 TNKSO95271 1327 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 ABCB11O95342 1321 aa13.13□□□□□ -0.31
FANCA-219ENST00000566133 ARIH2O95376 493 aa13.12□□□□□ -0.31
FANCA-219ENST00000566133 RAB30Q15771 203 aa13.12□□□□□ -0.31
FANCA-219ENST00000566133 STXBP2Q15833 593 aa13.12□□□□□ -0.31
FANCA-219ENST00000566133 LY6KQ17RY6 165 aa13.12□□□□□ -0.31
FANCA-219ENST00000566133 IFIT1BQ5T764 474 aaKnown RBP13.12□□□□□ -0.31
FANCA-219ENST00000566133 ARHGEF16Q5VV41 709 aa13.12□□□□□ -0.31
FANCA-219ENST00000566133 STAG2Q8N3U4 1231 aa13.12□□□□□ -0.31
FANCA-219ENST00000566133 RMDN3Q96TC7 470 aa13.12□□□□□ -0.31
FANCA-219ENST00000566133 WNT8AQ9H1J5 351 aa13.12□□□□□ -0.31
FANCA-219ENST00000566133 LRRC37A2A6NM11 1700 aa13.12□□□□□ -0.31
FANCA-219ENST00000566133 RAD50Q92878 1312 aa13.12□□□□□ -0.31
FANCA-219ENST00000566133 CFBP00751 764 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 PRKCSHP14314 528 aaPredicted RBP13.11□□□□□ -0.31
FANCA-219ENST00000566133 PDE4AP27815 886 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 TRDNQ13061 729 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 NFRKBQ6P4R8 1299 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 CCDC62Q6P9F0 684 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 CHST3Q7LGC8 479 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 DEFB128Q7Z7B8 93 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 RETREG2Q8NC44 543 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 PPM1EQ8WY54 764 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 IWS1Q96ST2 819 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 GAS2L1Q99501 681 aaPredicted RBP13.11□□□□□ -0.31
FANCA-219ENST00000566133 IL25Q9H293 177 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 NKX2-4Q9H2Z4 354 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 PRDM12Q9H4Q4 367 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 SLC28A3Q9HAS3 691 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 COL20A1Q9P218 1284 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 SLC4A7Q9Y6M7 1214 aa13.11□□□□□ -0.31
FANCA-219ENST00000566133 ZBBXA8MT70 800 aa13.1□□□□□ -0.31
FANCA-219ENST00000566133 KLRF2D3W0D1 207 aa13.1□□□□□ -0.31
FANCA-219ENST00000566133 GH1P01241 217 aa13.1□□□□□ -0.31
FANCA-219ENST00000566133 CASTP20810 708 aaKnown RBP13.1□□□□□ -0.31
FANCA-219ENST00000566133 RABGGTBP53611 331 aa13.1□□□□□ -0.31
FANCA-219ENST00000566133 CYB5R4Q7L1T6 521 aa13.1□□□□□ -0.31
FANCA-219ENST00000566133 AFG1LQ8WV93 481 aa13.1□□□□□ -0.31
FANCA-219ENST00000566133 RUFY2Q8WXA3 655 aa13.1□□□□□ -0.31
FANCA-219ENST00000566133 AMNQ9BXJ7 453 aa13.1□□□□□ -0.31
FANCA-219ENST00000566133 EIF3JO75822 258 aaKnown RBP13.09□□□□□ -0.31
FANCA-219ENST00000566133 NR3C2P08235 984 aa13.09□□□□□ -0.31
FANCA-219ENST00000566133 EIF2AK2P19525 551 aaKnown RBP13.09□□□□□ -0.31
FANCA-219ENST00000566133 IGFBP4P22692 258 aa13.09□□□□□ -0.31
FANCA-219ENST00000566133 PTPN11Q06124 597 aaPredicted RBP13.09□□□□□ -0.31
FANCA-219ENST00000566133 SEC23AQ15436 765 aa13.09□□□□□ -0.31
FANCA-219ENST00000566133 TTC22Q5TAA0 569 aa13.09□□□□□ -0.31
FANCA-219ENST00000566133 VWCEQ96DN2 955 aa13.09□□□□□ -0.31
FANCA-219ENST00000566133 FTOQ9C0B1 505 aaKnown RBP eCLIP13.09□□□□□ -0.31
FANCA-219ENST00000566133 MAD2L2Q9UI95 211 aa13.09□□□□□ -0.31
FANCA-219ENST00000566133 DDX41Q9UJV9 622 aaKnown RBP13.09□□□□□ -0.31
FANCA-219ENST00000566133 NOD1Q9Y239 953 aa13.09□□□□□ -0.31
FANCA-219ENST00000566133 YBX2Q9Y2T7 364 aaKnown RBP13.09□□□□□ -0.31
FANCA-219ENST00000566133 PALM3A6NDB9 673 aaPredicted RBP13.08□□□□□ -0.32
FANCA-219ENST00000566133 IFIT3O14879 490 aaKnown RBP13.08□□□□□ -0.32
FANCA-219ENST00000566133 PFKMP08237 780 aa13.08□□□□□ -0.32
FANCA-219ENST00000566133 IQCF3P0C7M6 154 aa13.08□□□□□ -0.32
FANCA-219ENST00000566133 MYCLP12524 364 aaPredicted RBP13.08□□□□□ -0.32
FANCA-219ENST00000566133 GSPT1P15170 499 aaKnown RBP13.08□□□□□ -0.32
FANCA-219ENST00000566133 MYOGP15173 224 aa13.08□□□□□ -0.32
FANCA-219ENST00000566133 CHMLP26374 656 aa13.08□□□□□ -0.32
FANCA-219ENST00000566133 PTH1RQ03431 593 aa13.08□□□□□ -0.32
FANCA-219ENST00000566133 BFSP2Q13515 415 aa13.08□□□□□ -0.32
FANCA-219ENST00000566133 CCDC85BQ15834 202 aaPredicted RBP13.08□□□□□ -0.32
FANCA-219ENST00000566133 PTGISQ16647 500 aa13.08□□□□□ -0.32
FANCA-219ENST00000566133 USP38Q8NB14 1042 aa13.08□□□□□ -0.32
FANCA-219ENST00000566133 PXMP2Q9NR77 195 aa13.08□□□□□ -0.32
FANCA-219ENST00000566133 PCDHA1Q9Y5I3 950 aa13.08□□□□□ -0.32
FANCA-219ENST00000566133 U3KPZ7 1027 aaPredicted RBP13.08□□□□□ -0.32
FANCA-219ENST00000566133 LAMA4Q16363 1823 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms