RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 DLL1O00548 723 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 DHX16O60231 1041 aaKnown RBP14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 EIF3JO75822 258 aaKnown RBP14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 PFKMP08237 780 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 GSPT1P15170 499 aaKnown RBP14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 CYP2C18P33260 490 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 GHRHRQ02643 423 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 SART3Q15020 963 aaKnown RBP14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 QRICH1Q2TAL8 776 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 ZNF365Q70YC5 407 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 MTMR8Q96EF0 704 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 RMDN3Q96TC7 470 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 NOC4LQ9BVI4 516 aaKnown RBP14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 PPP1R12CQ9BZL4 782 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 TRPV6Q9H1D0 765 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 TTYH1Q9H313 450 aaPredicted RBP14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 VAT1LQ9HCJ6 419 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 LCTP09848 1927 aa14.19□□□□□ -0.14
GTF3C1-204ENST00000564664 B4GALT4O60513 344 aa14.18□□□□□ -0.14
GTF3C1-204ENST00000564664 MYL3P08590 195 aa14.18□□□□□ -0.14
GTF3C1-204ENST00000564664 CYP21A2P08686 494 aa14.18□□□□□ -0.14
GTF3C1-204ENST00000564664 DNAJB2P25686 324 aa14.18□□□□□ -0.14
GTF3C1-204ENST00000564664 PSMC6P62333 389 aa14.18□□□□□ -0.14
GTF3C1-204ENST00000564664 ARHGEF16Q5VV41 709 aa14.18□□□□□ -0.14
GTF3C1-204ENST00000564664 CCDC62Q6P9F0 684 aa14.18□□□□□ -0.14
GTF3C1-204ENST00000564664 NCOA7Q8NI08 942 aa14.18□□□□□ -0.14
GTF3C1-204ENST00000564664 TAAR1Q96RJ0 339 aa14.18□□□□□ -0.14
GTF3C1-204ENST00000564664 MTA3Q9BTC8 594 aa14.18□□□□□ -0.14
GTF3C1-204ENST00000564664 CPVLQ9H3G5 476 aa14.18□□□□□ -0.14
GTF3C1-204ENST00000564664 LRRC37A2A6NM11 1700 aa14.18□□□□□ -0.14
GTF3C1-204ENST00000564664 ZBTB5O15062 677 aa14.17□□□□□ -0.14
GTF3C1-204ENST00000564664 PTGS1P23219 599 aa14.17□□□□□ -0.14
GTF3C1-204ENST00000564664 RFC2P35250 354 aa14.17□□□□□ -0.14
GTF3C1-204ENST00000564664 HSD17B4P51659 736 aa14.17□□□□□ -0.14
GTF3C1-204ENST00000564664 RAB30Q15771 203 aa14.17□□□□□ -0.14
GTF3C1-204ENST00000564664 KCNV1Q6PIU1 500 aa14.17□□□□□ -0.14
GTF3C1-204ENST00000564664 CYB5R4Q7L1T6 521 aa14.17□□□□□ -0.14
GTF3C1-204ENST00000564664 TBC1D5Q92609 795 aa14.17□□□□□ -0.14
GTF3C1-204ENST00000564664 TIFAQ96CG3 184 aa14.17□□□□□ -0.14
GTF3C1-204ENST00000564664 IL25Q9H293 177 aa14.17□□□□□ -0.14
GTF3C1-204ENST00000564664 RIOX1Q9H6W3 641 aa14.17□□□□□ -0.14
GTF3C1-204ENST00000564664 MAD2L2Q9UI95 211 aa14.17□□□□□ -0.14
GTF3C1-204ENST00000564664 IFIT3O14879 490 aaKnown RBP14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 SGSM2O43147 1006 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 GH1P01241 217 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 NR3C2P08235 984 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 ACRP10323 421 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 CASTP20810 708 aaKnown RBP14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 PTH1RQ03431 593 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 GRM4Q14833 912 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 NBPF20Q3BBV1 942 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 STOX1Q6ZVD7 989 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 RALYLQ86SE5 291 aaKnown RBP14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 STAG2Q8N3U4 1231 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 MAP4K1Q92918 833 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 EMID1Q96A84 441 aaPredicted RBP14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 MAP3K14Q99558 947 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 ZNF576Q9H609 170 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 MSRAQ9UJ68 235 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 PCDHA1Q9Y5I3 950 aa14.16□□□□□ -0.14
GTF3C1-204ENST00000564664 E7EWF7 191 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 PITPNM1O00562 1244 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 CFBP00751 764 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 TGFB3P10600 412 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 FOSL2P15408 326 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 CCL23P55773 120 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 LAMC2Q13753 1193 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 WTAPQ15007 396 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 SEPT14Q6ZU15 432 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 SESTD1Q86VW0 696 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 TMTC2Q8N394 836 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 RETREG2Q8NC44 543 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 MAFAQ8NHW3 353 aaPredicted RBP14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 PXMP2Q9NR77 195 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 TRMT13Q9NUP7 481 aaKnown RBP14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 COL20A1Q9P218 1284 aa14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 DDX41Q9UJV9 622 aaKnown RBP14.15□□□□□ -0.14
GTF3C1-204ENST00000564664 SCN10AQ9Y5Y9 1956 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 PNMA6FA0A0J9YX94 578 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 ARIH2O95376 493 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 SMARCA1P28370 1054 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 TROAPQ12815 778 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 BFSP2Q13515 415 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 DGKDQ16760 1214 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 LY6KQ17RY6 165 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 CATIPQ7Z7H3 387 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 VSIG10LQ86VR7 867 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 MYLIPQ8WY64 445 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 COPS5Q92905 334 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 PBX4Q9BYU1 374 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 WNT8AQ9H1J5 351 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 UMODL1Q5DID0 1318 aa14.14□□□□□ -0.15
GTF3C1-204ENST00000564664 CUL9Q8IWT3 2517 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 GCOM1H8Y6P7 765 aaPredicted RBP14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 OPLAHO14841 1288 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 PPFIA4O75335 1185 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 PARNO95453 639 aaKnown RBP14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 POLR2MP0CAP2 368 aa14.13□□□□□ -0.15
GTF3C1-204ENST00000564664 ACTN1P12814 892 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms