RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 RMDN3Q96TC7 470 aa17.17■□□□□ 0.34
SNX29-203ENST00000564111 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.17■□□□□ 0.34
SNX29-203ENST00000564111 MYADML2A6NDP7 307 aa17.17■□□□□ 0.34
SNX29-203ENST00000564111 ADCY6O43306 1168 aa17.17■□□□□ 0.34
SNX29-203ENST00000564111 RAG1P15918 1043 aa17.17■□□□□ 0.34
SNX29-203ENST00000564111 SLC43A3Q8NBI5 491 aa17.17■□□□□ 0.34
SNX29-203ENST00000564111 GPHNQ9NQX3 736 aaPredicted RBP17.17■□□□□ 0.34
SNX29-203ENST00000564111 GCOM1H8Y6P7 765 aaPredicted RBP17.16■□□□□ 0.34
SNX29-203ENST00000564111 CTAGE5O15320 804 aa17.16■□□□□ 0.34
SNX29-203ENST00000564111 STAM2O75886 525 aa17.16■□□□□ 0.34
SNX29-203ENST00000564111 POLR2MP0CAP2 368 aa17.16■□□□□ 0.34
SNX29-203ENST00000564111 MDM2Q00987 491 aaPredicted RBP17.16■□□□□ 0.34
SNX29-203ENST00000564111 PTPN11Q06124 597 aaPredicted RBP17.16■□□□□ 0.34
SNX29-203ENST00000564111 MTG1Q9BT17 334 aaPredicted RBP17.16■□□□□ 0.34
SNX29-203ENST00000564111 CPVLQ9H3G5 476 aa17.16■□□□□ 0.34
SNX29-203ENST00000564111 CEP290O15078 2479 aa17.16■□□□□ 0.34
SNX29-203ENST00000564111 EIF3JO75822 258 aaKnown RBP17.16■□□□□ 0.34
SNX29-203ENST00000564111 RCAN1P53805 252 aa17.16■□□□□ 0.34
SNX29-203ENST00000564111 EEPD1Q7L9B9 569 aa17.16■□□□□ 0.34
SNX29-203ENST00000564111 SGMS1Q86VZ5 419 aa17.16■□□□□ 0.34
SNX29-203ENST00000564111 CUL5Q93034 780 aa17.16■□□□□ 0.34
SNX29-203ENST00000564111 PXMP2Q9NR77 195 aa17.16■□□□□ 0.34
SNX29-203ENST00000564111 RBM28Q9NW13 759 aaKnown RBP17.16■□□□□ 0.34
SNX29-203ENST00000564111 SLC12A7Q9Y666 1083 aa17.16■□□□□ 0.34
SNX29-203ENST00000564111 REC8O95072 547 aa17.15■□□□□ 0.34
SNX29-203ENST00000564111 GH1P01241 217 aa17.15■□□□□ 0.34
SNX29-203ENST00000564111 PPIGQ13427 754 aaKnown RBP eCLIP17.15■□□□□ 0.348e-7■■■■□ 20.4
SNX29-203ENST00000564111 PDGFCQ9NRA1 345 aa17.15■□□□□ 0.34
SNX29-203ENST00000564111 EIF5BO60841 1220 aaKnown RBP17.15■□□□□ 0.34
SNX29-203ENST00000564111 CFBP00751 764 aa17.15■□□□□ 0.34
SNX29-203ENST00000564111 SUPT20HL2P0C7V6 817 aa17.15■□□□□ 0.34
SNX29-203ENST00000564111 FPGSQ05932 587 aa17.15■□□□□ 0.34
SNX29-203ENST00000564111 XRRA1Q6P2D8 792 aa17.15■□□□□ 0.34
SNX29-203ENST00000564111 NEK1Q96PY6 1258 aa17.15■□□□□ 0.34
SNX29-203ENST00000564111 PIGSQ96S52 555 aa17.15■□□□□ 0.34
SNX29-203ENST00000564111 TBX21Q9UL17 535 aa17.15■□□□□ 0.34
SNX29-203ENST00000564111 TIMP1P01033 207 aa17.14■□□□□ 0.33
SNX29-203ENST00000564111 TXNP10599 105 aaKnown RBP17.14■□□□□ 0.33
SNX29-203ENST00000564111 CCND2P30279 289 aa17.14■□□□□ 0.33
SNX29-203ENST00000564111 ITGA7Q13683 1181 aa17.14■□□□□ 0.33
SNX29-203ENST00000564111 HOMER1Q86YM7 354 aa17.14■□□□□ 0.33
SNX29-203ENST00000564111 TAAR1Q96RJ0 339 aa17.14■□□□□ 0.33
SNX29-203ENST00000564111 TRIM43BA6NCK2 446 aa17.13■□□□□ 0.33
SNX29-203ENST00000564111 BEX3Q00994 111 aa17.13■□□□□ 0.33
SNX29-203ENST00000564111 FAAP100Q0VG06 881 aa17.13■□□□□ 0.33
SNX29-203ENST00000564111 FAM126BQ8IXS8 530 aa17.13■□□□□ 0.33
SNX29-203ENST00000564111 TMEM199Q8N511 208 aa17.13■□□□□ 0.33
SNX29-203ENST00000564111 BADQ92934 168 aa17.13■□□□□ 0.33
SNX29-203ENST00000564111 EMID1Q96A84 441 aaPredicted RBP17.13■□□□□ 0.33
SNX29-203ENST00000564111 TRIM43Q96BQ3 446 aaPredicted RBP17.13■□□□□ 0.33
SNX29-203ENST00000564111 TAF6LQ9Y6J9 622 aa17.13■□□□□ 0.33
SNX29-203ENST00000564111 CHST3Q7LGC8 479 aa17.13■□□□□ 0.33
SNX29-203ENST00000564111 PURBQ96QR8 312 aaKnown RBP17.13■□□□□ 0.33
SNX29-203ENST00000564111 EHMT1Q9H9B1 1298 aa17.13■□□□□ 0.33
SNX29-203ENST00000564111 SCN10AQ9Y5Y9 1956 aa17.13■□□□□ 0.33
SNX29-203ENST00000564111 FRMPD4Q14CM0 1322 aa17.13■□□□□ 0.33
SNX29-203ENST00000564111 A6NJR5 290 aa17.12■□□□□ 0.33
SNX29-203ENST00000564111 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
SNX29-203ENST00000564111 NR3C2P08235 984 aa17.12■□□□□ 0.33
SNX29-203ENST00000564111 FAM109BQ6ICB4 259 aaPredicted RBP17.12■□□□□ 0.33
SNX29-203ENST00000564111 CXCL17Q6UXB2 119 aa17.12■□□□□ 0.33
SNX29-203ENST00000564111 DHX32Q7L7V1 743 aaKnown RBP17.12■□□□□ 0.33
SNX29-203ENST00000564111 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
SNX29-203ENST00000564111 CD4P01730 458 aa17.12■□□□□ 0.33
SNX29-203ENST00000564111 MYL3P08590 195 aa17.12■□□□□ 0.33
SNX29-203ENST00000564111 GNPTABQ3T906 1256 aa17.12■□□□□ 0.33
SNX29-203ENST00000564111 MFSD5Q6N075 450 aa17.12■□□□□ 0.33
SNX29-203ENST00000564111 NFRKBQ6P4R8 1299 aa17.12■□□□□ 0.33
SNX29-203ENST00000564111 KATNAL1Q9BW62 490 aa17.12■□□□□ 0.33
SNX29-203ENST00000564111 MTIF3Q9H2K0 278 aaKnown RBP17.12■□□□□ 0.33
SNX29-203ENST00000564111 PIK3CDO00329 1044 aa17.11■□□□□ 0.33
SNX29-203ENST00000564111 PPP1R11O60927 126 aaPredicted RBP17.11■□□□□ 0.33
SNX29-203ENST00000564111 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
SNX29-203ENST00000564111 TGFB3P10600 412 aa17.11■□□□□ 0.33
SNX29-203ENST00000564111 PURAQ00577 322 aaKnown RBP17.11■□□□□ 0.33
SNX29-203ENST00000564111 LAMC2Q13753 1193 aa17.11■□□□□ 0.33
SNX29-203ENST00000564111 PPP1R18Q6NYC8 613 aa17.11■□□□□ 0.33
SNX29-203ENST00000564111 CCDC62Q6P9F0 684 aa17.11■□□□□ 0.33
SNX29-203ENST00000564111 PDCD2LQ9BRP1 358 aa17.11■□□□□ 0.33
SNX29-203ENST00000564111 GLT8D2Q9H1C3 349 aa17.11■□□□□ 0.33
SNX29-203ENST00000564111 COL20A1Q9P218 1284 aa17.11■□□□□ 0.33
SNX29-203ENST00000564111 EIF2AK2P19525 551 aaKnown RBP17.11■□□□□ 0.33
SNX29-203ENST00000564111 PSRC1Q6PGN9 363 aaPredicted RBP17.11■□□□□ 0.33
SNX29-203ENST00000564111 CCDC155Q8N6L0 562 aa17.11■□□□□ 0.33
SNX29-203ENST00000564111 KCNB2Q92953 911 aa17.11■□□□□ 0.33
SNX29-203ENST00000564111 SENP2Q9HC62 589 aa17.11■□□□□ 0.33
SNX29-203ENST00000564111 MRVI1Q9Y6F6 885 aa17.11■□□□□ 0.33
SNX29-203ENST00000564111 OPLAHO14841 1288 aa17.1■□□□□ 0.33
SNX29-203ENST00000564111 CYTH3O43739 400 aa17.1■□□□□ 0.33
SNX29-203ENST00000564111 TMTC3Q6ZXV5 915 aa17.1■□□□□ 0.33
SNX29-203ENST00000564111 SH3RF1Q7Z6J0 888 aa17.1■□□□□ 0.33
SNX29-203ENST00000564111 PPP4R2Q9NY27 417 aa17.1■□□□□ 0.33
SNX29-203ENST00000564111 BRCA2P51587 3418 aa17.1■□□□□ 0.33
SNX29-203ENST00000564111 TMEM265A0A087WTH1 108 aa17.09■□□□□ 0.33
SNX29-203ENST00000564111 CCDC196A0A1B0GTZ2 297 aa17.09■□□□□ 0.33
SNX29-203ENST00000564111 CASTP20810 708 aaKnown RBP17.09■□□□□ 0.33
SNX29-203ENST00000564111 PSMA5P28066 241 aa17.09■□□□□ 0.33
SNX29-203ENST00000564111 SMAD3P84022 425 aaKnown RBP17.09■□□□□ 0.33
SNX29-203ENST00000564111 PGM5Q15124 567 aa17.09■□□□□ 0.33
SNX29-203ENST00000564111 SEPT14Q6ZU15 432 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms