RNA–Protein interactions for RNA: ENST00000563673.5

FANCA-213, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-213ENST00000563673 C7orf61Q8IZ16 206 aa17.31■□□□□ 0.36
FANCA-213ENST00000563673 WDR11Q9BZH6 1224 aa17.31■□□□□ 0.36
FANCA-213ENST00000563673 TM6SF1Q9BZW5 370 aa17.31■□□□□ 0.36
FANCA-213ENST00000563673 hCG_1642624A0A1W2PR95 340 aa17.3■□□□□ 0.36
FANCA-213ENST00000563673 RBM47A0AV96 593 aaKnown RBP17.3■□□□□ 0.36
FANCA-213ENST00000563673 EIF5BO60841 1220 aaKnown RBP17.3■□□□□ 0.36
FANCA-213ENST00000563673 EIF2AK2P19525 551 aaKnown RBP17.3■□□□□ 0.36
FANCA-213ENST00000563673 METAP2P50579 478 aaKnown RBP eCLIP17.3■□□□□ 0.36
FANCA-213ENST00000563673 IRX5P78411 483 aaPredicted RBP17.3■□□□□ 0.36
FANCA-213ENST00000563673 PPP2R5BQ15173 497 aa17.3■□□□□ 0.36
FANCA-213ENST00000563673 KCNA10Q16322 511 aa17.3■□□□□ 0.36
FANCA-213ENST00000563673 DUSP28Q4G0W2 176 aa17.3■□□□□ 0.36
FANCA-213ENST00000563673 TMEM63BQ5T3F8 832 aa17.3■□□□□ 0.36
FANCA-213ENST00000563673 CCSAPQ6IQ19 270 aaPredicted RBP17.3■□□□□ 0.36
FANCA-213ENST00000563673 SLC39A5Q6ZMH5 540 aa17.3■□□□□ 0.36
FANCA-213ENST00000563673 TLK2Q86UE8 772 aa17.3■□□□□ 0.36
FANCA-213ENST00000563673 PCSK9Q8NBP7 692 aaKnown RBP17.3■□□□□ 0.36
FANCA-213ENST00000563673 PXMP2Q9NR77 195 aa17.3■□□□□ 0.36
FANCA-213ENST00000563673 FAM217BQ9NTX9 383 aaPredicted RBP17.3■□□□□ 0.36
FANCA-213ENST00000563673 Q9Y3F1 56 aa17.3■□□□□ 0.36
FANCA-213ENST00000563673 CYP46A1Q9Y6A2 500 aa17.3■□□□□ 0.36
FANCA-213ENST00000563673 A0A1W2PQ45 241 aaPredicted RBP17.29■□□□□ 0.36
FANCA-213ENST00000563673 A0A1W2PQY0 241 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 MOXD2PA6NHM9 499 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 DYNC1LI2O43237 492 aaPredicted RBP17.29■□□□□ 0.36
FANCA-213ENST00000563673 CDC27P30260 824 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 ACLYP53396 1101 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 NKX3-2P78367 333 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 STXBP2Q15833 593 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 GNASQ5JWF2 1037 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 SCFD2Q8WU76 684 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 AP5M1Q9H0R1 490 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 CNTNAP5Q8WYK1 1306 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 LRRC37A2A6NM11 1700 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 CCDC196A0A1B0GTZ2 297 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 CTAGE5O15320 804 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 NR3C2P08235 984 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 PTGS1P23219 599 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 FUT2Q10981 343 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 FCHSD1Q86WN1 690 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 UPF3BQ9BZI7 483 aaKnown RBP17.29■□□□□ 0.36
FANCA-213ENST00000563673 CEP290O15078 2479 aa17.29■□□□□ 0.36
FANCA-213ENST00000563673 DNAH12Q6ZR08 3092 aa17.28■□□□□ 0.36
FANCA-213ENST00000563673 ASGR1P07306 291 aa17.28■□□□□ 0.36
FANCA-213ENST00000563673 ADD1P35611 737 aaKnown RBP17.28■□□□□ 0.36
FANCA-213ENST00000563673 BEX3Q00994 111 aa17.28■□□□□ 0.36
FANCA-213ENST00000563673 PDCD2LQ9BRP1 358 aa17.28■□□□□ 0.36
FANCA-213ENST00000563673 EIF3JO75822 258 aaKnown RBP17.27■□□□□ 0.36
FANCA-213ENST00000563673 EVCP57679 992 aa17.27■□□□□ 0.36
FANCA-213ENST00000563673 RTP1P59025 263 aa17.27■□□□□ 0.36
FANCA-213ENST00000563673 TOB2Q14106 344 aaPredicted RBP17.27■□□□□ 0.36
FANCA-213ENST00000563673 TTLL4Q14679 1199 aa17.27■□□□□ 0.36
FANCA-213ENST00000563673 SNX17Q15036 470 aa17.27■□□□□ 0.36
FANCA-213ENST00000563673 PGM5Q15124 567 aa17.27■□□□□ 0.36
FANCA-213ENST00000563673 FSCN1Q16658 493 aaKnown RBP17.27■□□□□ 0.36
FANCA-213ENST00000563673 C1orf53Q5VUE5 145 aa17.27■□□□□ 0.36
FANCA-213ENST00000563673 SEPT14Q6ZU15 432 aa17.27■□□□□ 0.36
FANCA-213ENST00000563673 HEATR3Q7Z4Q2 680 aa17.27■□□□□ 0.36
FANCA-213ENST00000563673 CUL5Q93034 780 aa17.27■□□□□ 0.36
FANCA-213ENST00000563673 STARD7Q9NQZ5 370 aa17.27■□□□□ 0.36
FANCA-213ENST00000563673 V9GY48 417 aaPredicted RBP17.27■□□□□ 0.36
FANCA-213ENST00000563673 ALPK3Q96L96 1907 aa17.27■□□□□ 0.35
FANCA-213ENST00000563673 NID2Q14112 1375 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 PIK3CDO00329 1044 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 MEIS2O14770 477 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 NKRFO15226 690 aaKnown RBP eCLIP17.26■□□□□ 0.35
FANCA-213ENST00000563673 TXNP10599 105 aaKnown RBP17.26■□□□□ 0.35
FANCA-213ENST00000563673 MYCLP12524 364 aaPredicted RBP17.26■□□□□ 0.35
FANCA-213ENST00000563673 ANAPC15P60006 121 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 USP17L6PQ6QN14 398 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 SMARCC2Q8TAQ2 1214 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 GPKOWQ92917 476 aaPredicted RBP eCLIP17.26■□□□□ 0.35
FANCA-213ENST00000563673 GLT1D1Q96MS3 346 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 PSTPIP2Q9H939 334 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 ZMYND8Q9ULU4 1186 aaPredicted RBP17.26■□□□□ 0.35
FANCA-213ENST00000563673 ATP11BQ9Y2G3 1177 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 ZEB2O60315 1214 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 ARIH2O95376 493 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 SEC24BO95487 1268 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 PDIA3P30101 505 aaKnown RBP17.26■□□□□ 0.35
FANCA-213ENST00000563673 TRIM60Q495X7 471 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 WWC2Q6AWC2 1192 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 VSIG10LQ86VR7 867 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 PDRG1Q9NUG6 133 aa17.26■□□□□ 0.35
FANCA-213ENST00000563673 ELP1O95163 1332 aa17.25■□□□□ 0.35
FANCA-213ENST00000563673 SYN1P17600 705 aa17.25■□□□□ 0.35
FANCA-213ENST00000563673 CCDC62Q6P9F0 684 aa17.25■□□□□ 0.35
FANCA-213ENST00000563673 OR6J1Q8NGC5 347 aa17.25■□□□□ 0.35
FANCA-213ENST00000563673 COPS5Q92905 334 aa17.25■□□□□ 0.35
FANCA-213ENST00000563673 hCG_1984214I3L0E3 225 aa17.24■□□□□ 0.35
FANCA-213ENST00000563673 CCND2P30279 289 aa17.24■□□□□ 0.35
FANCA-213ENST00000563673 ZNF713Q8N859 430 aaPredicted RBP17.24■□□□□ 0.35
FANCA-213ENST00000563673 IL31RAQ8NI17 732 aa17.24■□□□□ 0.35
FANCA-213ENST00000563673 VTI1AQ96AJ9 217 aa17.24■□□□□ 0.35
FANCA-213ENST00000563673 FRMPD4Q14CM0 1322 aa17.24■□□□□ 0.35
FANCA-213ENST00000563673 CPT1AP50416 773 aa17.23■□□□□ 0.35
FANCA-213ENST00000563673 NAPAP54920 295 aa17.23■□□□□ 0.35
FANCA-213ENST00000563673 CCT2P78371 535 aaKnown RBP17.23■□□□□ 0.35
FANCA-213ENST00000563673 LY6KQ17RY6 165 aa17.23■□□□□ 0.35
FANCA-213ENST00000563673 CXCL17Q6UXB2 119 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms