RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 KRT2P35908 639 aa21.55■■□□□ 1.04
RAB40C-207ENST00000563109 ALDH5A1P51649 535 aaPredicted RBP21.55■■□□□ 1.04
RAB40C-207ENST00000563109 PWP2Q15269 919 aaKnown RBP21.55■■□□□ 1.04
RAB40C-207ENST00000563109 KRT40Q6A162 431 aa21.55■■□□□ 1.04
RAB40C-207ENST00000563109 MSL3Q8N5Y2 521 aaKnown RBP21.55■■□□□ 1.04
RAB40C-207ENST00000563109 PXYLP1Q8TE99 480 aa21.55■■□□□ 1.04
RAB40C-207ENST00000563109 PURBQ96QR8 312 aaKnown RBP21.55■■□□□ 1.04
RAB40C-207ENST00000563109 TAAR1Q96RJ0 339 aa21.55■■□□□ 1.04
RAB40C-207ENST00000563109 GJB4Q9NTQ9 266 aa21.55■■□□□ 1.04
RAB40C-207ENST00000563109 BIN2Q9UBW5 565 aaPredicted RBP21.55■■□□□ 1.04
RAB40C-207ENST00000563109 LRRC37A2A6NM11 1700 aa21.55■■□□□ 1.04
RAB40C-207ENST00000563109 H3BQV1 296 aa21.54■■□□□ 1.04
RAB40C-207ENST00000563109 MMP1P03956 469 aa21.54■■□□□ 1.04
RAB40C-207ENST00000563109 GUCY1B3Q02153 619 aa21.54■■□□□ 1.04
RAB40C-207ENST00000563109 IFFO2Q5TF58 517 aa21.54■■□□□ 1.04
RAB40C-207ENST00000563109 JAKMIP3Q5VZ66 844 aa21.54■■□□□ 1.04
RAB40C-207ENST00000563109 MFSD14CQ5VZR4 134 aa21.54■■□□□ 1.04
RAB40C-207ENST00000563109 FBXO46Q6PJ61 603 aaPredicted RBP21.54■■□□□ 1.04
RAB40C-207ENST00000563109 PXMP2Q9NR77 195 aa21.54■■□□□ 1.04
RAB40C-207ENST00000563109 SYNGAP1Q96PV0 1343 aa21.54■■□□□ 1.04
RAB40C-207ENST00000563109 HMGCRP04035 888 aa21.53■■□□□ 1.04
RAB40C-207ENST00000563109 EIF2AK2P19525 551 aaKnown RBP21.53■■□□□ 1.04
RAB40C-207ENST00000563109 CLK2P49760 499 aaKnown RBP21.53■■□□□ 1.04
RAB40C-207ENST00000563109 CCL14Q16627 93 aa21.53■■□□□ 1.04
RAB40C-207ENST00000563109 FBXO18Q8NFZ0 1043 aa21.53■■□□□ 1.04
RAB40C-207ENST00000563109 FGD4Q96M96 766 aa21.53■■□□□ 1.04
RAB40C-207ENST00000563109 IWS1Q96ST2 819 aa21.53■■□□□ 1.04
RAB40C-207ENST00000563109 TINF2Q9BSI4 451 aa21.53■■□□□ 1.04
RAB40C-207ENST00000563109 TMEM260Q9NX78 707 aa21.53■■□□□ 1.04
RAB40C-207ENST00000563109 PCDHA6Q9UN73 950 aa21.53■■□□□ 1.04
RAB40C-207ENST00000563109 PCDHA8Q9Y5H6 950 aa21.53■■□□□ 1.04
RAB40C-207ENST00000563109 ELNP15502 786 aa21.52■■□□□ 1.04
RAB40C-207ENST00000563109 GRK4P32298 578 aa21.52■■□□□ 1.04
RAB40C-207ENST00000563109 PDE4DQ08499 809 aa21.52■■□□□ 1.04
RAB40C-207ENST00000563109 GNL2Q13823 731 aaKnown RBP21.52■■□□□ 1.04
RAB40C-207ENST00000563109 LARP1BQ659C4 914 aaKnown RBP21.52■■□□□ 1.04
RAB40C-207ENST00000563109 MAMDC4Q6UXC1 1216 aa21.52■■□□□ 1.04
RAB40C-207ENST00000563109 SPRYD3Q8NCJ5 442 aa21.52■■□□□ 1.04
RAB40C-207ENST00000563109 TRIB2Q92519 343 aa21.52■■□□□ 1.04
RAB40C-207ENST00000563109 ANO3Q9BYT9 981 aa21.52■■□□□ 1.04
RAB40C-207ENST00000563109 TSHZ2Q9NRE2 1034 aa21.52■■□□□ 1.04
RAB40C-207ENST00000563109 FLRT1Q9NZU1 646 aa21.52■■□□□ 1.04
RAB40C-207ENST00000563109 DAXXQ9UER7 740 aaPredicted RBP21.52■■□□□ 1.04
RAB40C-207ENST00000563109 MCM3APO60318 1980 aa21.52■■□□□ 1.04
RAB40C-207ENST00000563109 ASTN1O14525 1302 aa21.52■■□□□ 1.03
RAB40C-207ENST00000563109 FRMPD4Q14CM0 1322 aa21.52■■□□□ 1.03
RAB40C-207ENST00000563109 CCND2P30279 289 aa21.51■■□□□ 1.03
RAB40C-207ENST00000563109 NPY5RQ15761 445 aa21.51■■□□□ 1.03
RAB40C-207ENST00000563109 SLC9C1Q4G0N8 1177 aa21.51■■□□□ 1.03
RAB40C-207ENST00000563109 ARMCX2Q7L311 632 aa21.51■■□□□ 1.03
RAB40C-207ENST00000563109 KRT25Q7Z3Z0 450 aa21.51■■□□□ 1.03
RAB40C-207ENST00000563109 DIS3L2Q8IYB7 885 aaKnown RBP21.51■■□□□ 1.03
RAB40C-207ENST00000563109 RASGRP4Q8TDF6 673 aa21.51■■□□□ 1.03
RAB40C-207ENST00000563109 PDCD2LQ9BRP1 358 aa21.51■■□□□ 1.03
RAB40C-207ENST00000563109 CNPY2Q9Y2B0 182 aa21.51■■□□□ 1.03
RAB40C-207ENST00000563109 RPTORQ8N122 1335 aa21.51■■□□□ 1.03
RAB40C-207ENST00000563109 CCDC194A0A1B0GVG4 234 aa21.5■■□□□ 1.03
RAB40C-207ENST00000563109 PGM5Q15124 567 aa21.5■■□□□ 1.03
RAB40C-207ENST00000563109 PGBD1Q96JS3 809 aa21.5■■□□□ 1.03
RAB40C-207ENST00000563109 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.5■■□□□ 1.03
RAB40C-207ENST00000563109 MYCLP12524 364 aaPredicted RBP21.49■■□□□ 1.03
RAB40C-207ENST00000563109 EDNRBP24530 442 aa21.49■■□□□ 1.03
RAB40C-207ENST00000563109 CYP2C19P33261 490 aa21.49■■□□□ 1.03
RAB40C-207ENST00000563109 UBXN2AP68543 259 aa21.49■■□□□ 1.03
RAB40C-207ENST00000563109 STXBP2Q15833 593 aa21.49■■□□□ 1.03
RAB40C-207ENST00000563109 XRRA1Q6P2D8 792 aa21.49■■□□□ 1.03
RAB40C-207ENST00000563109 MORC4Q8TE76 937 aa21.49■■□□□ 1.03
RAB40C-207ENST00000563109 VPS37CA5D8V6 355 aaPredicted RBP21.48■■□□□ 1.03
RAB40C-207ENST00000563109 M0R2N6 131 aa21.48■■□□□ 1.03
RAB40C-207ENST00000563109 ADAMTS3O15072 1205 aa21.48■■□□□ 1.03
RAB40C-207ENST00000563109 INHAP05111 366 aa21.48■■□□□ 1.03
RAB40C-207ENST00000563109 NR3C2P08235 984 aa21.48■■□□□ 1.03
RAB40C-207ENST00000563109 SREBF1P36956 1147 aa21.48■■□□□ 1.03
RAB40C-207ENST00000563109 NONOQ15233 471 aaKnown RBP eCLIP21.48■■□□□ 1.031e-6■■■■□ 24.9
RAB40C-207ENST00000563109 PCNX4Q63HM2 1172 aa21.48■■□□□ 1.03
RAB40C-207ENST00000563109 OXER1Q8TDS5 423 aa21.48■■□□□ 1.03
RAB40C-207ENST00000563109 NRBP1Q9UHY1 535 aa21.48■■□□□ 1.03
RAB40C-207ENST00000563109 RBM19Q9Y4C8 960 aaKnown RBP21.48■■□□□ 1.03
RAB40C-207ENST00000563109 MYH7BA7E2Y1 1941 aa21.48■■□□□ 1.03
RAB40C-207ENST00000563109 BTBD18B2RXH4 712 aa21.47■■□□□ 1.03
RAB40C-207ENST00000563109 STAM2O75886 525 aa21.47■■□□□ 1.03
RAB40C-207ENST00000563109 NR5A1Q13285 461 aa21.47■■□□□ 1.03
RAB40C-207ENST00000563109 MCTP1Q6DN14 999 aa21.47■■□□□ 1.03
RAB40C-207ENST00000563109 IL31RAQ8NI17 732 aa21.47■■□□□ 1.03
RAB40C-207ENST00000563109 SH3TC2Q8TF17 1288 aa21.47■■□□□ 1.03
RAB40C-207ENST00000563109 MCOLN1Q9GZU1 580 aa21.47■■□□□ 1.03
RAB40C-207ENST00000563109 FOXP1Q9H334 677 aaPredicted RBP21.47■■□□□ 1.03
RAB40C-207ENST00000563109 ABHD16BQ9H3Z7 469 aa21.47■■□□□ 1.03
RAB40C-207ENST00000563109 VTA1Q9NP79 307 aa21.47■■□□□ 1.03
RAB40C-207ENST00000563109 ZHX1Q9UKY1 873 aaPredicted RBP21.47■■□□□ 1.03
RAB40C-207ENST00000563109 KIAA1217Q5T5P2 1943 aa21.47■■□□□ 1.03
RAB40C-207ENST00000563109 PDIA4P13667 645 aaKnown RBP21.46■■□□□ 1.03
RAB40C-207ENST00000563109 PRKAR2AP13861 404 aaKnown RBP21.46■■□□□ 1.03
RAB40C-207ENST00000563109 ARHGAP4P98171 946 aa21.46■■□□□ 1.03
RAB40C-207ENST00000563109 PIK3AP1Q6ZUJ8 805 aa21.46■■□□□ 1.03
RAB40C-207ENST00000563109 FBXO16Q8IX29 292 aaPredicted RBP21.46■■□□□ 1.03
RAB40C-207ENST00000563109 EIF3JO75822 258 aaKnown RBP21.45■■□□□ 1.02
RAB40C-207ENST00000563109 SNAI1O95863 264 aaPredicted RBP21.45■■□□□ 1.02
RAB40C-207ENST00000563109 IGHA2P01877 340 aa21.45■■□□□ 1.02
RAB40C-207ENST00000563109 SYT1P21579 422 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms