RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 EDNRBP24530 442 aa12.08□□□□□ -0.48
BBS4-205ENST00000562219 RPS6P62753 249 aaKnown RBP12.08□□□□□ -0.48
BBS4-205ENST00000562219 AAK1Q2M2I8 961 aa12.08□□□□□ -0.48
BBS4-205ENST00000562219 NBPF20Q3BBV1 942 aa12.08□□□□□ -0.48
BBS4-205ENST00000562219 FAM47CQ5HY64 1035 aa12.08□□□□□ -0.48
BBS4-205ENST00000562219 DNERQ8NFT8 737 aa12.08□□□□□ -0.48
BBS4-205ENST00000562219 B4DLN1 442 aa12.07□□□□□ -0.48
BBS4-205ENST00000562219 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
BBS4-205ENST00000562219 FGAP02671 866 aa12.07□□□□□ -0.48
BBS4-205ENST00000562219 PCP11498 1178 aaKnown RBP12.07□□□□□ -0.48
BBS4-205ENST00000562219 POU3F3P20264 500 aaPredicted RBP12.07□□□□□ -0.48
BBS4-205ENST00000562219 MRPL12P52815 198 aaKnown RBP12.07□□□□□ -0.48
BBS4-205ENST00000562219 PTPN11Q06124 597 aaPredicted RBP12.07□□□□□ -0.48
BBS4-205ENST00000562219 ZNF543Q08ER8 600 aa12.07□□□□□ -0.48
BBS4-205ENST00000562219 BFSP2Q13515 415 aa12.07□□□□□ -0.48
BBS4-205ENST00000562219 PHOSPHO2Q8TCD6 241 aa12.07□□□□□ -0.48
BBS4-205ENST00000562219 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
BBS4-205ENST00000562219 BRWD1Q9NSI6 2320 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 MICAL3Q7RTP6 2002 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 A0A0D9SFI3 127 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 IQCF3P0C7M6 154 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 SNHG28P0DPA3 235 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 TXNP10599 105 aaKnown RBP12.06□□□□□ -0.48
BBS4-205ENST00000562219 BMP1P13497 986 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 TFF2Q03403 129 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 SKIV2LQ15477 1246 aaKnown RBP12.06□□□□□ -0.48
BBS4-205ENST00000562219 MCMDC2Q4G0Z9 681 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 TICAM2Q86XR7 235 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 HERC6Q8IVU3 1022 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 RETREG2Q8NC44 543 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 FAM227BQ96M60 508 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 TTC14Q96N46 770 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 NOD1Q9Y239 953 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 MTCH2Q9Y6C9 303 aa12.06□□□□□ -0.48
BBS4-205ENST00000562219 BAIAP3O94812 1187 aa12.05□□□□□ -0.48
BBS4-205ENST00000562219 HSPD1P10809 573 aaKnown RBP12.05□□□□□ -0.48
BBS4-205ENST00000562219 KCNQ1P51787 676 aa12.05□□□□□ -0.48
BBS4-205ENST00000562219 HAND2P61296 217 aa12.05□□□□□ -0.48
BBS4-205ENST00000562219 TAP1Q03518 808 aa12.05□□□□□ -0.48
BBS4-205ENST00000562219 USH1GQ495M9 461 aa12.05□□□□□ -0.48
BBS4-205ENST00000562219 GPATCH4Q5T3I0 446 aaKnown RBP12.05□□□□□ -0.48
BBS4-205ENST00000562219 MFSD6Q6ZSS7 791 aa12.05□□□□□ -0.48
BBS4-205ENST00000562219 CCDC155Q8N6L0 562 aa12.05□□□□□ -0.48
BBS4-205ENST00000562219 PPP1R13LQ8WUF5 828 aa12.05□□□□□ -0.48
BBS4-205ENST00000562219 COPS5Q92905 334 aa12.05□□□□□ -0.48
BBS4-205ENST00000562219 NECAB3Q96P71 396 aaPredicted RBP12.05□□□□□ -0.48
BBS4-205ENST00000562219 FTOQ9C0B1 505 aaKnown RBP eCLIP12.05□□□□□ -0.48
BBS4-205ENST00000562219 CERS4Q9HA82 394 aa12.05□□□□□ -0.48
BBS4-205ENST00000562219 NLRC5Q86WI3 1866 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 EPOPA6NHQ4 379 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 KIF28PB7ZC32 967 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 RFXAPO00287 272 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 ARIH2O95376 493 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 PDE1AP54750 535 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 PTGISQ16647 500 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 ANKRD45Q5TZF3 282 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 ZNF589Q86UQ0 364 aaPredicted RBP12.04□□□□□ -0.48
BBS4-205ENST00000562219 SESTD1Q86VW0 696 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 TBC1D10CQ8IV04 446 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 RGS22Q8NE09 1264 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 CAGE1Q8TC20 777 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 AFAP1L1Q8TED9 768 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 ARNTL2Q8WYA1 636 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 MAF1Q9H063 256 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 RNF41Q9H4P4 317 aaPredicted RBP12.04□□□□□ -0.48
BBS4-205ENST00000562219 RAPGEFL1Q9UHV5 662 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 CCDC171Q6TFL3 1326 aa12.04□□□□□ -0.48
BBS4-205ENST00000562219 ARHGEF15O94989 841 aa12.03□□□□□ -0.48
BBS4-205ENST00000562219 MMP3P08254 477 aa12.03□□□□□ -0.48
BBS4-205ENST00000562219 KCNJ6P48051 423 aa12.03□□□□□ -0.48
BBS4-205ENST00000562219 CHMP4BP1P59074 171 aa12.03□□□□□ -0.48
BBS4-205ENST00000562219 NMIQ13287 307 aaPredicted RBP12.03□□□□□ -0.48
BBS4-205ENST00000562219 CCDC62Q6P9F0 684 aa12.03□□□□□ -0.48
BBS4-205ENST00000562219 AFG1LQ8WV93 481 aa12.03□□□□□ -0.48
BBS4-205ENST00000562219 ESR2Q92731 530 aa12.03□□□□□ -0.48
BBS4-205ENST00000562219 CTAGE1Q96RT6 745 aa12.03□□□□□ -0.48
BBS4-205ENST00000562219 C1QTNF1Q9BXJ1 281 aa12.03□□□□□ -0.48
BBS4-205ENST00000562219 COG5Q9UP83 839 aa12.03□□□□□ -0.48
BBS4-205ENST00000562219 ABCB11O95342 1321 aa12.03□□□□□ -0.48
BBS4-205ENST00000562219 NEDD4P46934 1319 aa12.03□□□□□ -0.48
BBS4-205ENST00000562219 DOCK5Q9H7D0 1870 aa12.02□□□□□ -0.48
BBS4-205ENST00000562219 TLL1O43897 1013 aa12.02□□□□□ -0.49
BBS4-205ENST00000562219 GH1P01241 217 aa12.02□□□□□ -0.49
BBS4-205ENST00000562219 GOLGA8HP0CJ92 632 aa12.02□□□□□ -0.49
BBS4-205ENST00000562219 ARHGAP1Q07960 439 aa12.02□□□□□ -0.49
BBS4-205ENST00000562219 CDC37Q16543 378 aaPredicted RBP12.02□□□□□ -0.49
BBS4-205ENST00000562219 KRT40Q6A162 431 aa12.02□□□□□ -0.49
BBS4-205ENST00000562219 SEPT14Q6ZU15 432 aa12.02□□□□□ -0.49
BBS4-205ENST00000562219 DGKHQ86XP1 1220 aa12.02□□□□□ -0.49
BBS4-205ENST00000562219 NSUN6Q8TEA1 469 aaKnown RBP12.02□□□□□ -0.49
BBS4-205ENST00000562219 CPVLQ9H3G5 476 aa12.02□□□□□ -0.49
BBS4-205ENST00000562219 RALGAPA2Q2PPJ7 1873 aa12.02□□□□□ -0.49
BBS4-205ENST00000562219 PARNO95453 639 aaKnown RBP12.01□□□□□ -0.49
BBS4-205ENST00000562219 SELPP16109 830 aa12.01□□□□□ -0.49
BBS4-205ENST00000562219 PLA2G5P39877 138 aa12.01□□□□□ -0.49
BBS4-205ENST00000562219 NT5C2P49902 561 aa12.01□□□□□ -0.49
BBS4-205ENST00000562219 MFAP1P55081 439 aaKnown RBP12.01□□□□□ -0.49
BBS4-205ENST00000562219 WDR5P61964 334 aaKnown RBP12.01□□□□□ -0.49
BBS4-205ENST00000562219 RBL2Q08999 1139 aa12.01□□□□□ -0.49
BBS4-205ENST00000562219 GRB10Q13322 594 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms