RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 SLC9A7Q96T83 725 aa13.9□□□□□ -0.18
CARMIL3-204ENST00000561354 IQCF3P0C7M6 154 aa13.89□□□□□ -0.19
CARMIL3-204ENST00000561354 TXNP10599 105 aaKnown RBP13.89□□□□□ -0.19
CARMIL3-204ENST00000561354 NT5C2P49902 561 aa13.89□□□□□ -0.19
CARMIL3-204ENST00000561354 FAM47CQ5HY64 1035 aa13.89□□□□□ -0.19
CARMIL3-204ENST00000561354 GPATCH4Q5T3I0 446 aaKnown RBP13.89□□□□□ -0.19
CARMIL3-204ENST00000561354 DEFB128Q7Z7B8 93 aa13.89□□□□□ -0.19
CARMIL3-204ENST00000561354 RETREG2Q8NC44 543 aa13.89□□□□□ -0.19
CARMIL3-204ENST00000561354 RNF41Q9H4P4 317 aaPredicted RBP13.89□□□□□ -0.19
CARMIL3-204ENST00000561354 CA3P07451 260 aa13.88□□□□□ -0.19
CARMIL3-204ENST00000561354 HAND2P61296 217 aa13.88□□□□□ -0.19
CARMIL3-204ENST00000561354 NMIQ13287 307 aaPredicted RBP13.88□□□□□ -0.19
CARMIL3-204ENST00000561354 BFSP2Q13515 415 aa13.88□□□□□ -0.19
CARMIL3-204ENST00000561354 HDAC1Q13547 482 aaPredicted RBP13.88□□□□□ -0.19
CARMIL3-204ENST00000561354 ZNF589Q86UQ0 364 aaPredicted RBP13.88□□□□□ -0.19
CARMIL3-204ENST00000561354 DGKHQ86XP1 1220 aa13.88□□□□□ -0.19
CARMIL3-204ENST00000561354 IL27Q8NEV9 243 aa13.88□□□□□ -0.19
CARMIL3-204ENST00000561354 COPS5Q92905 334 aa13.88□□□□□ -0.19
CARMIL3-204ENST00000561354 UHRF1Q96T88 793 aaPredicted RBP13.88□□□□□ -0.19
CARMIL3-204ENST00000561354 CCDC171Q6TFL3 1326 aa13.88□□□□□ -0.19
CARMIL3-204ENST00000561354 BMP1P13497 986 aa13.87□□□□□ -0.19
CARMIL3-204ENST00000561354 COL9A1P20849 921 aa13.87□□□□□ -0.19
CARMIL3-204ENST00000561354 AAK1Q2M2I8 961 aa13.87□□□□□ -0.19
CARMIL3-204ENST00000561354 CCDC62Q6P9F0 684 aa13.87□□□□□ -0.19
CARMIL3-204ENST00000561354 TBC1D10CQ8IV04 446 aa13.87□□□□□ -0.19
CARMIL3-204ENST00000561354 ESR2Q92731 530 aa13.87□□□□□ -0.19
CARMIL3-204ENST00000561354 SCN5AQ14524 2016 aa13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 KIF28PB7ZC32 967 aa13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 GTPBP6O43824 516 aaPredicted RBP13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 BAIAP3O94812 1187 aa13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 ARIH2O95376 493 aa13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 MFAP1P55081 439 aaKnown RBP13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 RRP1P56182 461 aaKnown RBP13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 CCDC178Q5BJE1 867 aa13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 SESTD1Q86VW0 696 aa13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 HERC6Q8IVU3 1022 aa13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 ANKS1AQ92625 1134 aa13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 FTOQ9C0B1 505 aaKnown RBP eCLIP13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 NOD1Q9Y239 953 aa13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 MTCH2Q9Y6C9 303 aa13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 ABCB11O95342 1321 aa13.86□□□□□ -0.19
CARMIL3-204ENST00000561354 TANC1Q9C0D5 1861 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 RFXAPO00287 272 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 ZNF213O14771 459 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 GOLGA8HP0CJ92 632 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 TAP1Q03518 808 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 CDC37Q16543 378 aaPredicted RBP13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 PTGISQ16647 500 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 USH1GQ495M9 461 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 MICALL1Q8N3F8 863 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 CCDC155Q8N6L0 562 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 CAGE1Q8TC20 777 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 SYTL5Q8TDW5 730 aaPredicted RBP13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 NSUN6Q8TEA1 469 aaKnown RBP13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 AFAP1L1Q8TED9 768 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 PPP1R13LQ8WUF5 828 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 AFG1LQ8WV93 481 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 IWS1Q96ST2 819 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 UBA5Q9GZZ9 404 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 CHD9Q3L8U1 2897 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 NEDD4P46934 1319 aa13.85□□□□□ -0.19
CARMIL3-204ENST00000561354 TRIM6-TRIM34B2RNG4 842 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 PARNO95453 639 aaKnown RBP13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 GH1P01241 217 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 MMP3P08254 477 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 SDSP20132 328 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 CASTP20810 708 aaKnown RBP13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 ARHGAP1Q07960 439 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 IQCA1Q86XH1 822 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 MCF2L2Q86YR7 1114 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 PNMA1Q8ND90 353 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 TBC1D5Q92609 795 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 TAAR1Q96RJ0 339 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 CTAGE1Q96RT6 745 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 CRBNQ96SW2 442 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 ZKSCAN3Q9BRR0 538 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 CPVLQ9H3G5 476 aa13.84□□□□□ -0.19
CARMIL3-204ENST00000561354 MUC3AQ02505 3323 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 EPOPA6NHQ4 379 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 TFF2Q03403 129 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 RBL2Q08999 1139 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 GPNMBQ14956 572 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 SKIV2LQ15477 1246 aaKnown RBP13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 STXBP2Q15833 593 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 LY6KQ17RY6 165 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 ASPRV1Q53RT3 343 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 GDF6Q6KF10 455 aaPredicted RBP13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 SEPT14Q6ZU15 432 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 ADGRF4Q8IZF3 695 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 KAT2BQ92831 832 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 RILPL2Q969X0 211 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 EMID1Q96A84 441 aaPredicted RBP13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 RMDN3Q96TC7 470 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 CERS4Q9HA82 394 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 COL20A1Q9P218 1284 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 DDX41Q9UJV9 622 aaKnown RBP13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 COG5Q9UP83 839 aa13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 PRRC2BQ5JSZ5 2229 aaKnown RBP13.83□□□□□ -0.2
CARMIL3-204ENST00000561354 TET1Q8NFU7 2136 aa13.82□□□□□ -0.2
CARMIL3-204ENST00000561354 KDM4AO75164 1064 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms