RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 BECN1Q14457 450 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
LRRC28-221ENST00000561276 CCL14Q16627 93 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 KRT40Q6A162 431 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 SPRYD3Q8NCJ5 442 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 DNERQ8NFT8 737 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 BICD2Q8TD16 824 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 PXYLP1Q8TE99 480 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 NSUN6Q8TEA1 469 aaKnown RBP11.79□□□□□ -0.52
LRRC28-221ENST00000561276 C8orf76Q96K31 380 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 FGD4Q96M96 766 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 RMDN3Q96TC7 470 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 APBA2Q99767 749 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 TMEM260Q9NX78 707 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 FLRT1Q9NZU1 646 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 PCDHA4Q9UN74 947 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 KIF3AQ9Y496 699 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 PTCH2Q9Y6C5 1203 aa11.79□□□□□ -0.52
LRRC28-221ENST00000561276 FOSP01100 380 aaPredicted RBP11.78□□□□□ -0.52
LRRC28-221ENST00000561276 ELNP15502 786 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 CLK2P49760 499 aaKnown RBP11.78□□□□□ -0.52
LRRC28-221ENST00000561276 ALDH5A1P51649 535 aaPredicted RBP11.78□□□□□ -0.52
LRRC28-221ENST00000561276 GUCY1B3Q02153 619 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 NPY5RQ15761 445 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 ARHGEF16Q5VV41 709 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 JAKMIP3Q5VZ66 844 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 LARP1BQ659C4 914 aaKnown RBP11.78□□□□□ -0.52
LRRC28-221ENST00000561276 GALNT17Q6IS24 598 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 FBXO46Q6PJ61 603 aaPredicted RBP11.78□□□□□ -0.52
LRRC28-221ENST00000561276 MAMDC4Q6UXC1 1216 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 ZNF467Q7Z7K2 595 aaPredicted RBP11.78□□□□□ -0.52
LRRC28-221ENST00000561276 TEX2Q8IWB9 1127 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 TRMT44Q8IYL2 757 aaKnown RBP11.78□□□□□ -0.52
LRRC28-221ENST00000561276 BLIDQ8IZY5 108 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 FBXO18Q8NFZ0 1043 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 TINF2Q9BSI4 451 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 TSHZ2Q9NRE2 1034 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 PCDHA6Q9UN73 950 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 PCDHA8Q9Y5H6 950 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 ASTN1O14525 1302 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 MYH7BA7E2Y1 1941 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 KIAA1217Q5T5P2 1943 aa11.78□□□□□ -0.52
LRRC28-221ENST00000561276 ASB14A6NK59 587 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 SPDYE3A6NKU9 549 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 B4DLN1 442 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 M0R2N6 131 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 IGHA2P01877 340 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 MMP1P03956 469 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 EIF2AK2P19525 551 aaKnown RBP11.77□□□□□ -0.53
LRRC28-221ENST00000561276 GRK4P32298 578 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 UBXN2AP68543 259 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 OLFML2BQ68BL8 750 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 MCTP2Q6DN12 878 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 REXO1Q8N1G1 1221 aaKnown RBP11.77□□□□□ -0.53
LRRC28-221ENST00000561276 DAGLBQ8NCG7 672 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 RASGRP4Q8TDF6 673 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 OXER1Q8TDS5 423 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 TRIB2Q92519 343 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 PGBD1Q96JS3 809 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 IWS1Q96ST2 819 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 PXMP2Q9NR77 195 aa11.77□□□□□ -0.53
LRRC28-221ENST00000561276 DDX49Q9Y6V7 483 aaKnown RBP11.77□□□□□ -0.53
LRRC28-221ENST00000561276 LOC102724159A0A0B4J2E5 919 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 BTBD18B2RXH4 712 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 GABBR2O75899 941 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 SNAI1O95863 264 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-221ENST00000561276 NR3C2P08235 984 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 MYCLP12524 364 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-221ENST00000561276 CYP2C19P33261 490 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 KRT2P35908 639 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 TRIM32Q13049 653 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 PGM5Q15124 567 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 PWP2Q15269 919 aaKnown RBP11.76□□□□□ -0.53
LRRC28-221ENST00000561276 STXBP2Q15833 593 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 SLC9C1Q4G0N8 1177 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 PRAMEF19Q5SWL8 479 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 ARMCX2Q7L311 632 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 MSL3Q8N5Y2 521 aaKnown RBP11.76□□□□□ -0.53
LRRC28-221ENST00000561276 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 MPHOSPH6Q99547 160 aaKnown RBP11.76□□□□□ -0.53
LRRC28-221ENST00000561276 PDCD2LQ9BRP1 358 aa11.76□□□□□ -0.53
LRRC28-221ENST00000561276 RBM19Q9Y4C8 960 aaKnown RBP11.76□□□□□ -0.53
LRRC28-221ENST00000561276 LRRC37A2A6NM11 1700 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 H3BQV1 296 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 HMGCRP04035 888 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 PDCP20941 246 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 ANP32AP39687 249 aaKnown RBP11.75□□□□□ -0.53
LRRC28-221ENST00000561276 CACNB2Q08289 660 aaPredicted RBP11.75□□□□□ -0.53
LRRC28-221ENST00000561276 PDE4DQ08499 809 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 AP3B2Q13367 1082 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 SAFBQ15424 915 aaKnown RBP eCLIP11.75□□□□□ -0.53
LRRC28-221ENST00000561276 IFFO2Q5TF58 517 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 MFSD14CQ5VZR4 134 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 VSIG10LQ86VR7 867 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 DIS3L2Q8IYB7 885 aaKnown RBP11.75□□□□□ -0.53
LRRC28-221ENST00000561276 MORC4Q8TE76 937 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 SH3TC2Q8TF17 1288 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 ZFP91Q96JP5 570 aaPredicted RBP11.75□□□□□ -0.53
LRRC28-221ENST00000561276 ANO3Q9BYT9 981 aa11.75□□□□□ -0.53
LRRC28-221ENST00000561276 ABHD16BQ9H3Z7 469 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms