RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 LCTP09848 1927 aa24.02■■□□□ 1.44
PSEN1-225ENST00000560005 RNF113AO15541 343 aaKnown RBP24.01■■□□□ 1.43
PSEN1-225ENST00000560005 MYL3P08590 195 aa24.01■■□□□ 1.43
PSEN1-225ENST00000560005 RFC2P35250 354 aa24.01■■□□□ 1.43
PSEN1-225ENST00000560005 GRB10Q13322 594 aa24.01■■□□□ 1.43
PSEN1-225ENST00000560005 KCTD1Q719H9 257 aa24.01■■□□□ 1.43
PSEN1-225ENST00000560005 HERC6Q8IVU3 1022 aa24.01■■□□□ 1.43
PSEN1-225ENST00000560005 MORC4Q8TE76 937 aa24.01■■□□□ 1.43
PSEN1-225ENST00000560005 C11orf16Q9NQ32 467 aa24.01■■□□□ 1.43
PSEN1-225ENST00000560005 MUC6Q6W4X9 2439 aa24.01■■□□□ 1.43
PSEN1-225ENST00000560005 BRWD1Q9NSI6 2320 aa24■■□□□ 1.43
PSEN1-225ENST00000560005 FAM86C2PA6NEL3 165 aa24■■□□□ 1.43
PSEN1-225ENST00000560005 GNAT2P19087 354 aa24■■□□□ 1.43
PSEN1-225ENST00000560005 CPT1AP50416 773 aa24■■□□□ 1.43
PSEN1-225ENST00000560005 ANAPC15P60006 121 aa24■■□□□ 1.43
PSEN1-225ENST00000560005 TFAP4Q01664 338 aa24■■□□□ 1.43
PSEN1-225ENST00000560005 NMIQ13287 307 aaPredicted RBP24■■□□□ 1.43
PSEN1-225ENST00000560005 SPRED2Q7Z698 418 aa24■■□□□ 1.43
PSEN1-225ENST00000560005 PPP1R13LQ8WUF5 828 aa24■■□□□ 1.43
PSEN1-225ENST00000560005 MTG1Q9BT17 334 aaPredicted RBP24■■□□□ 1.43
PSEN1-225ENST00000560005 WDR11Q9BZH6 1224 aa24■■□□□ 1.43
PSEN1-225ENST00000560005 FTOQ9C0B1 505 aaKnown RBP eCLIP24■■□□□ 1.43
PSEN1-225ENST00000560005 CCPG1Q9ULG6 757 aa24■■□□□ 1.43
PSEN1-225ENST00000560005 PRR12Q9ULL5 1215 aa24■■□□□ 1.43
PSEN1-225ENST00000560005 KIF28PB7ZC32 967 aa23.99■■□□□ 1.43
PSEN1-225ENST00000560005 M0R2C6 588 aa23.99■■□□□ 1.43
PSEN1-225ENST00000560005 IQCF3P0C7M6 154 aa23.99■■□□□ 1.43
PSEN1-225ENST00000560005 MCMDC2Q4G0Z9 681 aa23.99■■□□□ 1.43
PSEN1-225ENST00000560005 GPHNQ9NQX3 736 aaPredicted RBP23.99■■□□□ 1.43
PSEN1-225ENST00000560005 LPXNO60711 386 aa23.98■■□□□ 1.43
PSEN1-225ENST00000560005 PLA2G6O60733 806 aa23.98■■□□□ 1.43
PSEN1-225ENST00000560005 GPR37L1O60883 481 aa23.98■■□□□ 1.43
PSEN1-225ENST00000560005 PDE4BQ07343 736 aa23.98■■□□□ 1.43
PSEN1-225ENST00000560005 NBPF20Q3BBV1 942 aa23.98■■□□□ 1.43
PSEN1-225ENST00000560005 RASGRP2Q7LDG7 609 aa23.98■■□□□ 1.43
PSEN1-225ENST00000560005 IFNL3Q8IZI9 196 aa23.98■■□□□ 1.43
PSEN1-225ENST00000560005 RETREG2Q8NC44 543 aa23.98■■□□□ 1.43
PSEN1-225ENST00000560005 OR6J1Q8NGC5 347 aa23.98■■□□□ 1.43
PSEN1-225ENST00000560005 TANC1Q9C0D5 1861 aa23.98■■□□□ 1.43
PSEN1-225ENST00000560005 PATL2C9JE40 543 aaKnown RBP23.97■■□□□ 1.43
PSEN1-225ENST00000560005 PITPNM1O00562 1244 aa23.97■■□□□ 1.43
PSEN1-225ENST00000560005 ALDH5A1P51649 535 aaPredicted RBP23.97■■□□□ 1.43
PSEN1-225ENST00000560005 COL4A4P53420 1690 aaPredicted RBP23.97■■□□□ 1.43
PSEN1-225ENST00000560005 STX8Q9UNK0 236 aa23.97■■□□□ 1.43
PSEN1-225ENST00000560005 SCN10AQ9Y5Y9 1956 aa23.97■■□□□ 1.43
PSEN1-225ENST00000560005 TET1Q8NFU7 2136 aa23.96■■□□□ 1.43
PSEN1-225ENST00000560005 BAATQ14032 418 aaPredicted RBP23.96■■□□□ 1.43
PSEN1-225ENST00000560005 RABEP1Q15276 862 aa23.96■■□□□ 1.43
PSEN1-225ENST00000560005 ZMYM1Q5SVZ6 1142 aa23.96■■□□□ 1.43
PSEN1-225ENST00000560005 RCSD1Q6JBY9 416 aa23.96■■□□□ 1.43
PSEN1-225ENST00000560005 LSG1Q9H089 658 aaKnown RBP23.96■■□□□ 1.43
PSEN1-225ENST00000560005 ADD3Q9UEY8 706 aaKnown RBP23.96■■□□□ 1.43
PSEN1-225ENST00000560005 ICAM1P05362 532 aa23.95■■□□□ 1.42
PSEN1-225ENST00000560005 NFRKBQ6P4R8 1299 aa23.95■■□□□ 1.42
PSEN1-225ENST00000560005 FAM227BQ96M60 508 aa23.95■■□□□ 1.42
PSEN1-225ENST00000560005 NACAP1Q9BZK3 213 aa23.95■■□□□ 1.42
PSEN1-225ENST00000560005 CD320Q9NPF0 282 aa23.95■■□□□ 1.42
PSEN1-225ENST00000560005 MTMR7Q9Y216 660 aa23.95■■□□□ 1.42
PSEN1-225ENST00000560005 RBM47A0AV96 593 aaKnown RBP23.94■■□□□ 1.42
PSEN1-225ENST00000560005 LCHNA4D1U4 455 aa23.94■■□□□ 1.42
PSEN1-225ENST00000560005 SLC3A2P08195 630 aaKnown RBP23.94■■□□□ 1.42
PSEN1-225ENST00000560005 BFSP2Q13515 415 aa23.94■■□□□ 1.42
PSEN1-225ENST00000560005 GDPD5Q8WTR4 605 aa23.94■■□□□ 1.42
PSEN1-225ENST00000560005 NOD1Q9Y239 953 aa23.94■■□□□ 1.42
PSEN1-225ENST00000560005 CCDC171Q6TFL3 1326 aa23.93■■□□□ 1.42
PSEN1-225ENST00000560005 PTPRSQ13332 1948 aa23.93■■□□□ 1.42
PSEN1-225ENST00000560005 A0A0D9SFI3 127 aa23.93■■□□□ 1.42
PSEN1-225ENST00000560005 NFIBO00712 420 aa23.93■■□□□ 1.42
PSEN1-225ENST00000560005 BAIAP3O94812 1187 aa23.93■■□□□ 1.42
PSEN1-225ENST00000560005 HSPA4P34932 840 aa23.93■■□□□ 1.42
PSEN1-225ENST00000560005 KCNJ6P48051 423 aa23.93■■□□□ 1.42
PSEN1-225ENST00000560005 PPARAQ07869 468 aa23.93■■□□□ 1.42
PSEN1-225ENST00000560005 BRDTQ58F21 947 aaPredicted RBP23.93■■□□□ 1.42
PSEN1-225ENST00000560005 TMCO2Q7Z6W1 182 aaPredicted RBP23.93■■□□□ 1.42
PSEN1-225ENST00000560005 IL17RAQ96F46 866 aa23.93■■□□□ 1.42
PSEN1-225ENST00000560005 PI4K2BG5E9Z4 385 aa23.92■■□□□ 1.42
PSEN1-225ENST00000560005 NMT2O60551 498 aa23.92■■□□□ 1.42
PSEN1-225ENST00000560005 PPP2R5BQ15173 497 aa23.92■■□□□ 1.42
PSEN1-225ENST00000560005 CCDC96Q2M329 555 aa23.92■■□□□ 1.42
PSEN1-225ENST00000560005 PPP4R3BQ5MIZ7 849 aa23.92■■□□□ 1.42
PSEN1-225ENST00000560005 RNF20Q5VTR2 975 aa23.92■■□□□ 1.42
PSEN1-225ENST00000560005 MAP4K1Q92918 833 aa23.92■■□□□ 1.42
PSEN1-225ENST00000560005 SEC62Q99442 399 aaKnown RBP23.92■■□□□ 1.42
PSEN1-225ENST00000560005 NAPBQ9H115 298 aa23.92■■□□□ 1.42
PSEN1-225ENST00000560005 RANBP17Q9H2T7 1088 aaKnown RBP23.92■■□□□ 1.42
PSEN1-225ENST00000560005 LOC102724159A0A0B4J2E5 919 aa23.91■■□□□ 1.42
PSEN1-225ENST00000560005 PTPDC1A2A3K4 754 aa23.91■■□□□ 1.42
PSEN1-225ENST00000560005 TSPY2A6NKD2 308 aa23.91■■□□□ 1.42
PSEN1-225ENST00000560005 CHMP4BP1P59074 171 aa23.91■■□□□ 1.42
PSEN1-225ENST00000560005 PTPN11Q06124 597 aaPredicted RBP23.91■■□□□ 1.42
PSEN1-225ENST00000560005 PWP2Q15269 919 aaKnown RBP23.91■■□□□ 1.42
PSEN1-225ENST00000560005 SLC30A10Q6XR72 485 aa23.91■■□□□ 1.42
PSEN1-225ENST00000560005 COPS5Q92905 334 aa23.91■■□□□ 1.42
PSEN1-225ENST00000560005 SNX21Q969T3 373 aa23.91■■□□□ 1.42
PSEN1-225ENST00000560005 IL17RBQ9NRM6 502 aa23.91■■□□□ 1.42
PSEN1-225ENST00000560005 A6NJR5 290 aa23.9■■□□□ 1.42
PSEN1-225ENST00000560005 KPNA6O60684 536 aa23.9■■□□□ 1.42
PSEN1-225ENST00000560005 CALML3P27482 149 aa23.9■■□□□ 1.42
PSEN1-225ENST00000560005 SLC16A2P36021 539 aa23.9■■□□□ 1.42
PSEN1-225ENST00000560005 WDR5P61964 334 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms