RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 SYT1P21579 422 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 HOXA13P31271 388 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-215ENST00000559774 SREBF1P36956 1147 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 ALDH5A1P51649 535 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-215ENST00000559774 USP11P51784 963 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 LBX1P52954 281 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 PRKCZQ05513 592 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 STXBP2Q15833 593 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 ARHGEF16Q5VV41 709 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 PCNX4Q63HM2 1172 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 SLC30A10Q6XR72 485 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 DIS3L2Q8IYB7 885 aaKnown RBP9.93□□□□□ -0.82
LRRC28-215ENST00000559774 SLAIN1Q8ND83 568 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 NAP1L4Q99733 375 aaKnown RBP9.93□□□□□ -0.82
LRRC28-215ENST00000559774 ANO3Q9BYT9 981 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 PXMP2Q9NR77 195 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 TSKSQ9UJT2 592 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 PCDHA6Q9UN73 950 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 KCNJ14Q9UNX9 436 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 PCDHA8Q9Y5H6 950 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 COL11A1P12107 1806 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-215ENST00000559774 CCDC194A0A1B0GVG4 234 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 SOWAHBA6NEL2 793 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 BTBD18B2RXH4 712 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 STX6O43752 255 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 EIF3JO75822 258 aaKnown RBP9.92□□□□□ -0.82
LRRC28-215ENST00000559774 PGK2P07205 417 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 NR3C2P08235 984 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 TAL1P17542 331 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-215ENST00000559774 KCNA4P22459 653 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 TRAPPC10P48553 1259 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 CNTN2Q02246 1040 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 ORC2Q13416 577 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-215ENST00000559774 PGM5Q15124 567 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 NONOQ15233 471 aaKnown RBP eCLIP9.92□□□□□ -0.82
LRRC28-215ENST00000559774 UBE2SQ16763 222 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 MFSD14CQ5VZR4 134 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 KCNV1Q6PIU1 500 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 MOXD1Q6UVY6 613 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 BRAPQ7Z569 592 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 VSIG10LQ86VR7 867 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 FCHSD1Q86WN1 690 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 NOSTRINQ8IVI9 506 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 RAET1EQ8TD07 263 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 CRYGNQ8WXF5 182 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 TNFRSF25Q93038 417 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 FGD4Q96M96 766 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 IPO9Q96P70 1041 aaKnown RBP9.92□□□□□ -0.82
LRRC28-215ENST00000559774 TAAR1Q96RJ0 339 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 PDCD2LQ9BRP1 358 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 TINF2Q9BSI4 451 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 ABHD16BQ9H3Z7 469 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 ZSCAN16Q9H4T2 348 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-215ENST00000559774 COL20A1Q9P218 1284 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 BIN2Q9UBW5 565 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-215ENST00000559774 PTPN22Q9Y2R2 807 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 TRIM17Q9Y577 477 aa9.92□□□□□ -0.82
LRRC28-215ENST00000559774 BAZ2BQ9UIF8 2168 aaKnown RBP9.91□□□□□ -0.82
LRRC28-215ENST00000559774 HMGCRP04035 888 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 TGFB3P10600 412 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 GCFC2P16383 781 aaKnown RBP9.91□□□□□ -0.82
LRRC28-215ENST00000559774 CAPN2P17655 700 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 CYP2B6P20813 491 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 CCND2P30279 289 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 CIITAP33076 1130 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 NUCB2P80303 420 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 ARHGAP4P98171 946 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 CAP1Q01518 475 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 GNL2Q13823 731 aaKnown RBP9.91□□□□□ -0.82
LRRC28-215ENST00000559774 JAKMIP3Q5VZ66 844 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 FBXO46Q6PJ61 603 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-215ENST00000559774 NIPA1Q7RTP0 329 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 NPLOC4Q8TAT6 608 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 CDHR1Q96JP9 859 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 VTA1Q9NP79 307 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 GJB4Q9NTQ9 266 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 CIZ1Q9ULV3 898 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-215ENST00000559774 GABRQQ9UN88 632 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 CNPY2Q9Y2B0 182 aa9.91□□□□□ -0.82
LRRC28-215ENST00000559774 ASTN1O14525 1302 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 CYP3A7-CYP3A51PA0A087WV96 503 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 ADCY3O60266 1144 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 CYP3A7P24462 503 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 GRK4P32298 578 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 DDIT3P35638 169 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 PDE4DQ08499 809 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 NR5A1Q13285 461 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 GNPTABQ3T906 1256 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 RILPL1Q5EBL4 403 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 PPP4R3AQ6IN85 833 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 ARMCX2Q7L311 632 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 NEK8Q86SG6 692 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 OXER1Q8TDS5 423 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 TBCKQ8TEA7 893 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 GPRASP2Q96D09 838 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 INPP4AQ96PE3 977 aaPredicted RBP9.9□□□□□ -0.82
LRRC28-215ENST00000559774 NOL7Q9UMY1 257 aaKnown RBP9.9□□□□□ -0.82
LRRC28-215ENST00000559774 MTMR6Q9Y217 621 aa9.9□□□□□ -0.82
LRRC28-215ENST00000559774 RBM47A0AV96 593 aaKnown RBP9.89□□□□□ -0.83
LRRC28-215ENST00000559774 MEIS1O00470 390 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms