RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CYTH3O43739 400 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 ADAMTS4O75173 837 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 EIF3JO75822 258 aaKnown RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 STAM2O75886 525 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 ASGR1P07306 291 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 NR3C2P08235 984 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 TXNP10599 105 aaKnown RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 SMPD1P17405 629 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 EIF2AK2P19525 551 aaKnown RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 RXRAP19793 462 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 EDNRBP24530 442 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 HOXA13P31271 388 aaPredicted RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 MNX1P50219 401 aaPredicted RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 METAP2P50579 478 aaKnown RBP eCLIP5.04□□□□□ -1.6
SNX1-205ENST00000559339 HSD17B4P51659 736 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 AKAP17AQ02040 695 aaKnown RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 FSCN1Q16658 493 aaKnown RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 LRRC26Q2I0M4 334 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 DUSP28Q4G0W2 176 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 TAPT1Q6NXT6 567 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 APOA5Q6Q788 366 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 SEPT14Q6ZU15 432 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 Q6ZUG5 572 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 TMTC3Q6ZXV5 915 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 RUFY3Q7L099 469 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 HEATR3Q7Z4Q2 680 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 FCHSD1Q86WN1 690 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 TEX2Q8IWB9 1127 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 CMTR1Q8N1G2 835 aaKnown RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 FBXL16Q8N461 479 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 SRBD1Q8N5C6 995 aaKnown RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 ZNF713Q8N859 430 aaPredicted RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 KLHDC9Q8NEP7 349 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 KCNB2Q92953 911 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 BRF1Q92994 677 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 LENG1Q96BZ8 264 aaPredicted RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 TCEANC2Q96MN5 208 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 USP26Q9BXU7 913 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 SEZ6LQ9BYH1 1024 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 KATNBL1Q9H079 304 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 GLT8D2Q9H1C3 349 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 PSTPIP2Q9H939 334 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 PRDM5Q9NQX1 630 aaPredicted RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 PXMP2Q9NR77 195 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 PDGFCQ9NRA1 345 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 RBM27Q9P2N5 1060 aaKnown RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 GNEQ9Y223 722 aaKnown RBP5.04□□□□□ -1.6
SNX1-205ENST00000559339 ATP11BQ9Y2G3 1177 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 SNX14Q9Y5W7 946 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 CYP46A1Q9Y6A2 500 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 PLXNB2O15031 1838 aa5.04□□□□□ -1.6
SNX1-205ENST00000559339 ASTN1O14525 1302 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 LAMA4Q16363 1823 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 A0A0U1RQG5 324 aaPredicted RBP5.03□□□□□ -1.6
SNX1-205ENST00000559339 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.03□□□□□ -1.6
SNX1-205ENST00000559339 A0A1W2PPC1 479 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 SPDYE3A6NKU9 549 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 PIK3CDO00329 1044 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 CPLX1O14810 134 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 TLR3O15455 904 aaKnown RBP5.03□□□□□ -1.6
SNX1-205ENST00000559339 KPNA6O60684 536 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 PQBP1O60828 265 aaKnown RBP5.03□□□□□ -1.6
SNX1-205ENST00000559339 PPP1R11O60927 126 aaPredicted RBP5.03□□□□□ -1.6
SNX1-205ENST00000559339 PLEKHA8P1O95397 391 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 GH1P01241 217 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 CLTBP09497 229 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 SUPT20HL2P0C7V6 817 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 TGFB3P10600 412 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 MYCLP12524 364 aaPredicted RBP5.03□□□□□ -1.6
SNX1-205ENST00000559339 SYN1P17600 705 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 RPS6KB1P23443 525 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 CCND2P30279 289 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 NAPAP54920 295 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 RTP1P59025 263 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 ANAPC15P60006 121 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 NKX3-2P78367 333 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 BEX3Q00994 111 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 GHRHRQ02643 423 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 SNX17Q15036 470 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 ANKRD1Q15327 319 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 GNPTABQ3T906 1256 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 TRIM60Q495X7 471 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 CCSAPQ6IQ19 270 aaPredicted RBP5.03□□□□□ -1.6
SNX1-205ENST00000559339 XRRA1Q6P2D8 792 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 CPLX2Q6PUV4 134 aaKnown RBP5.03□□□□□ -1.6
SNX1-205ENST00000559339 CXCL17Q6UXB2 119 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 ANKRD33Q7Z3H0 272 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 RAB11FIP4Q86YS3 637 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 TRIM22Q8IYM9 498 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 OR6J1Q8NGC5 347 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 CCDC12Q8WUD4 166 aaPredicted RBP5.03□□□□□ -1.6
SNX1-205ENST00000559339 TBC1D5Q92609 795 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 CDHR1Q96JP9 859 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 TOX2Q96NM4 488 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 TAAR1Q96RJ0 339 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 PDCD2LQ9BRP1 358 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 TM6SF1Q9BZW5 370 aa5.03□□□□□ -1.6
SNX1-205ENST00000559339 UBE2OQ9C0C9 1292 aaKnown RBP5.03□□□□□ -1.6
SNX1-205ENST00000559339 UPF3AQ9H1J1 476 aaKnown RBP5.03□□□□□ -1.6
SNX1-205ENST00000559339 EHMT1Q9H9B1 1298 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms