RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 GBP1P32455 592 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 APBA1Q02410 837 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 TMCO4Q5TGY1 634 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 CCDC174Q6PII3 467 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 STXBP4Q6ZWJ1 553 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 FNBP4Q8N3X1 1017 aaPredicted RBP7.81□□□□□ -1.16
USP3-210ENST00000559192 GBP5Q96PP8 586 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 PLCB1Q9NQ66 1216 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 CTTNBP2NLQ9P2B4 639 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 ODF2LQ9ULJ1 636 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 PACSIN2Q9UNF0 486 aaPredicted RBP7.81□□□□□ -1.16
USP3-210ENST00000559192 ERBB3P21860 1342 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 RIMS1Q86UR5 1692 aaKnown RBP7.81□□□□□ -1.16
USP3-210ENST00000559192 ERVV-2B6SEH9 535 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 PALMO75781 387 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 RFX5P48382 616 aaPredicted RBP7.81□□□□□ -1.16
USP3-210ENST00000559192 KLK7P49862 253 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 ARHGAP44Q17R89 818 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 RSRC2Q7L4I2 434 aaKnown RBP7.81□□□□□ -1.16
USP3-210ENST00000559192 REXO1Q8N1G1 1221 aaKnown RBP7.81□□□□□ -1.16
USP3-210ENST00000559192 TCP11Q8WWU5 503 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 IQCDQ96DY2 449 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 OSBPL9Q96SU4 736 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 TRIM7Q9C029 511 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 ADD3Q9UEY8 706 aaKnown RBP7.81□□□□□ -1.16
USP3-210ENST00000559192 MAP3K15Q6ZN16 1313 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 HEG1Q9ULI3 1381 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 TPD52P55327 224 aaPredicted RBP7.81□□□□□ -1.16
USP3-210ENST00000559192 MAP7Q14244 749 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 SLF2Q8IX21 1173 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 CCDC105Q8IYK2 499 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.81□□□□□ -1.16
USP3-210ENST00000559192 MAP3K14Q99558 947 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 TRIM4Q9C037 500 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 NKIRAS1Q9NYS0 192 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 AMFRQ9UKV5 643 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 ATP8A1Q9Y2Q0 1164 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 ATP6V0A2Q9Y487 856 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 WDR19Q8NEZ3 1342 aa7.81□□□□□ -1.16
USP3-210ENST00000559192 LRRC53A6NM62 1247 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 GCNT3O95395 438 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 MIER3Q7Z3K6 550 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 KRT26Q7Z3Y9 468 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 GPBP1Q86WP2 473 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 SYCE1Q8N0S2 351 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 MS4A14Q96JA4 679 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 MTUS1Q9ULD2 1270 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 ASAP1Q9ULH1 1129 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 PREX1Q8TCU6 1659 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 CD44P16070 742 aaKnown RBP7.8□□□□□ -1.16
USP3-210ENST00000559192 ERVK-24P63145 666 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 DPYDQ12882 1025 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 TAOK1Q7L7X3 1001 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 NEK8Q86SG6 692 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 RETREG2Q8NC44 543 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 STAG1Q8WVM7 1258 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 NLRP3Q96P20 1036 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 SETDB2Q96T68 719 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 CCDC77Q9BR77 488 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 NUCKS1Q9H1E3 243 aaKnown RBP7.8□□□□□ -1.16
USP3-210ENST00000559192 VEZTQ9HBM0 779 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 ARPP21Q9UBL0 812 aaPredicted RBP7.8□□□□□ -1.16
USP3-210ENST00000559192 ZBTB21Q9ULJ3 1066 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 ADCY1Q08828 1119 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 PDIA6Q15084 440 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 RABL6Q3YEC7 729 aaPredicted RBP7.8□□□□□ -1.16
USP3-210ENST00000559192 ZNF804AQ7Z570 1209 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 TEX11Q8IYF3 940 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 PROCA1Q8NCQ7 364 aaPredicted RBP7.8□□□□□ -1.16
USP3-210ENST00000559192 KIFC2Q96AC6 838 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 ANKRD26Q9UPS8 1709 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 RPL13P26373 211 aaKnown RBP7.8□□□□□ -1.16
USP3-210ENST00000559192 NEDD9Q14511 834 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 TNIP1Q15025 636 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 PTPAQ15257 358 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 EMBQ6PCB8 327 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 MAEAQ7L5Y9 396 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 TMC4Q7Z404 712 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 UBL4BQ8N7F7 174 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 RAB17Q9H0T7 212 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 NDST4Q9H3R1 872 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 PKD2L1Q9P0L9 805 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 FRMD4BQ9Y2L6 1034 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 PTPN22Q9Y2R2 807 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 PCDHB13Q9Y5F0 798 aa7.8□□□□□ -1.16
USP3-210ENST00000559192 CCNE1P24864 410 aa7.79□□□□□ -1.16
USP3-210ENST00000559192 SLC8A1P32418 973 aa7.79□□□□□ -1.16
USP3-210ENST00000559192 SLCO1A2P46721 670 aa7.79□□□□□ -1.16
USP3-210ENST00000559192 SH3BGRP55822 239 aaPredicted RBP7.79□□□□□ -1.16
USP3-210ENST00000559192 MAN2A1Q16706 1144 aa7.79□□□□□ -1.16
USP3-210ENST00000559192 CADPS2Q86UW7 1296 aa7.79□□□□□ -1.16
USP3-210ENST00000559192 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.79□□□□□ -1.16
USP3-210ENST00000559192 AGPAT5Q9NUQ2 364 aa7.79□□□□□ -1.16
USP3-210ENST00000559192 ASIC3Q9UHC3 531 aa7.79□□□□□ -1.16
USP3-210ENST00000559192 SPDYE3A6NKU9 549 aa7.79□□□□□ -1.16
USP3-210ENST00000559192 CYP27B1O15528 508 aa7.79□□□□□ -1.16
USP3-210ENST00000559192 TRAPPC10P48553 1259 aa7.79□□□□□ -1.16
USP3-210ENST00000559192 CORO7P57737 925 aa7.79□□□□□ -1.16
USP3-210ENST00000559192 DHX9Q08211 1270 aaKnown RBP7.79□□□□□ -1.16
USP3-210ENST00000559192 ADAM9Q13443 819 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms