RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 POLR2MP0CAP2 368 aa12.53□□□□□ -0.4
TPM1-217ENST00000559108 ZNF865P0CJ78 1059 aaPredicted RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 IRX5P78411 483 aaPredicted RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 ARHGEF6Q15052 776 aa12.53□□□□□ -0.4
TPM1-217ENST00000559108 PKN2Q16513 984 aaKnown RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 SLC9C1Q4G0N8 1177 aa12.53□□□□□ -0.4
TPM1-217ENST00000559108 EARS2Q5JPH6 523 aaKnown RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 EEPD1Q7L9B9 569 aa12.53□□□□□ -0.4
TPM1-217ENST00000559108 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 MCF2L2Q86YR7 1114 aa12.53□□□□□ -0.4
TPM1-217ENST00000559108 FBXO16Q8IX29 292 aaPredicted RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 TRIM22Q8IYM9 498 aa12.53□□□□□ -0.4
TPM1-217ENST00000559108 ZNF713Q8N859 430 aaPredicted RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 CRYGNQ8WXF5 182 aa12.53□□□□□ -0.4
TPM1-217ENST00000559108 LLPHQ9BRT6 129 aaKnown RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 PHF20Q9BVI0 1012 aa12.53□□□□□ -0.4
TPM1-217ENST00000559108 PDGFCQ9NRA1 345 aa12.53□□□□□ -0.4
TPM1-217ENST00000559108 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
TPM1-217ENST00000559108 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 BIN2Q9UBW5 565 aaPredicted RBP12.53□□□□□ -0.4
TPM1-217ENST00000559108 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.52□□□□□ -0.41
TPM1-217ENST00000559108 CDKL5O76039 1030 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 MCM2P49736 904 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 ADCY7P51828 1080 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 MRPS9P82933 396 aaKnown RBP12.52□□□□□ -0.41
TPM1-217ENST00000559108 AKAP17AQ02040 695 aaKnown RBP12.52□□□□□ -0.41
TPM1-217ENST00000559108 GUCY1B3Q02153 619 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 PGM5Q15124 567 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 JAKMIP3Q5VZ66 844 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 ANO1Q5XXA6 986 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 TAPT1Q6NXT6 567 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 CPLX2Q6PUV4 134 aaKnown RBP12.52□□□□□ -0.41
TPM1-217ENST00000559108 TNFRSF25Q93038 417 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 ABHD8Q96I13 439 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 RMDN3Q96TC7 470 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 PDCD2LQ9BRP1 358 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.41
TPM1-217ENST00000559108 SYNGAP1Q96PV0 1343 aa12.52□□□□□ -0.41
TPM1-217ENST00000559108 WNT7AO00755 349 aa12.51□□□□□ -0.41
TPM1-217ENST00000559108 ARIH2O95376 493 aa12.51□□□□□ -0.41
TPM1-217ENST00000559108 CCL5P13501 91 aa12.51□□□□□ -0.41
TPM1-217ENST00000559108 GJB2P29033 226 aa12.51□□□□□ -0.41
TPM1-217ENST00000559108 GJC2Q5T442 439 aaPredicted RBP12.51□□□□□ -0.41
TPM1-217ENST00000559108 KRT40Q6A162 431 aa12.51□□□□□ -0.41
TPM1-217ENST00000559108 DAGLBQ8NCG7 672 aa12.51□□□□□ -0.41
TPM1-217ENST00000559108 CUL5Q93034 780 aa12.51□□□□□ -0.41
TPM1-217ENST00000559108 ANO3Q9BYT9 981 aa12.51□□□□□ -0.41
TPM1-217ENST00000559108 SH3GLB2Q9NR46 395 aa12.51□□□□□ -0.41
TPM1-217ENST00000559108 PCDHA6Q9UN73 950 aa12.51□□□□□ -0.41
TPM1-217ENST00000559108 TELO2Q9Y4R8 837 aa12.51□□□□□ -0.41
TPM1-217ENST00000559108 PCDHA8Q9Y5H6 950 aa12.51□□□□□ -0.41
TPM1-217ENST00000559108 MYH15Q9Y2K3 1946 aa12.5□□□□□ -0.41
TPM1-217ENST00000559108 KIF28PB7ZC32 967 aa12.5□□□□□ -0.41
TPM1-217ENST00000559108 ADCYAP1R1P41586 468 aa12.5□□□□□ -0.41
TPM1-217ENST00000559108 TRAF1Q13077 416 aa12.5□□□□□ -0.41
TPM1-217ENST00000559108 SEMA3FQ13275 785 aa12.5□□□□□ -0.41
TPM1-217ENST00000559108 NR5A1Q13285 461 aa12.5□□□□□ -0.41
TPM1-217ENST00000559108 LHX8Q68G74 356 aa12.5□□□□□ -0.41
TPM1-217ENST00000559108 DNERQ8NFT8 737 aa12.5□□□□□ -0.41
TPM1-217ENST00000559108 CYP2W1Q8TAV3 490 aa12.5□□□□□ -0.41
TPM1-217ENST00000559108 MAF1Q9H063 256 aa12.5□□□□□ -0.41
TPM1-217ENST00000559108 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.5□□□□□ -0.41
TPM1-217ENST00000559108 BCAS3Q9H6U6 928 aa12.5□□□□□ -0.41
TPM1-217ENST00000559108 PAK6Q9NQU5 681 aaPredicted RBP12.5□□□□□ -0.41
TPM1-217ENST00000559108 PCDHA4Q9UN74 947 aa12.5□□□□□ -0.41
TPM1-217ENST00000559108 KIAA0100Q14667 2235 aaKnown RBP12.5□□□□□ -0.41
TPM1-217ENST00000559108 ALPK3Q96L96 1907 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 CTAGE5O15320 804 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 MMP1P03956 469 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 NR3C2P08235 984 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 MYCLP12524 364 aaPredicted RBP12.49□□□□□ -0.41
TPM1-217ENST00000559108 NLRP5P59047 1200 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 ACVR2BQ13705 512 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 ARHGEF16Q5VV41 709 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 MFSD14CQ5VZR4 134 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 VSIG10LQ86VR7 867 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 TNS4Q8IZW8 715 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 BLIDQ8IZY5 108 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 REXO1Q8N1G1 1221 aaKnown RBP12.49□□□□□ -0.41
TPM1-217ENST00000559108 MSL3Q8N5Y2 521 aaKnown RBP12.49□□□□□ -0.41
TPM1-217ENST00000559108 IL27Q8NEV9 243 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 CCDC148Q8NFR7 591 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 NSUN6Q8TEA1 469 aaKnown RBP12.49□□□□□ -0.41
TPM1-217ENST00000559108 C6orf50Q9HD87 102 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 SLC5A4Q9NY91 659 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 MAP3K20Q9NYL2 800 aaKnown RBP12.49□□□□□ -0.41
TPM1-217ENST00000559108 ADD3Q9UEY8 706 aaKnown RBP12.49□□□□□ -0.41
TPM1-217ENST00000559108 ZHX1Q9UKY1 873 aaPredicted RBP12.49□□□□□ -0.41
TPM1-217ENST00000559108 WDR81Q562E7 1941 aa12.49□□□□□ -0.41
TPM1-217ENST00000559108 RBM47A0AV96 593 aaKnown RBP12.48□□□□□ -0.41
TPM1-217ENST00000559108 MYADML2A6NDP7 307 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 ASB14A6NK59 587 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 BTBD18B2RXH4 712 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 SMPD1P17405 629 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 ITGB5P18084 799 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 SREBF1P36956 1147 aa12.48□□□□□ -0.41
TPM1-217ENST00000559108 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
TPM1-217ENST00000559108 MRPL12P52815 198 aaKnown RBP12.48□□□□□ -0.41
TPM1-217ENST00000559108 HMGN5P82970 282 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms