RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 EIF2AK2P19525 551 aaKnown RBP20.02■□□□□ 0.8
TPM1-214ENST00000558544 NLRP5P59047 1200 aa20.02■□□□□ 0.8
TPM1-214ENST00000558544 UBXN2AP68543 259 aa20.02■□□□□ 0.8
TPM1-214ENST00000558544 HMGN5P82970 282 aaKnown RBP20.02■□□□□ 0.8
TPM1-214ENST00000558544 CACNB2Q08289 660 aaPredicted RBP20.02■□□□□ 0.8
TPM1-214ENST00000558544 ARHGEF16Q5VV41 709 aa20.02■□□□□ 0.8
TPM1-214ENST00000558544 MSL3Q8N5Y2 521 aaKnown RBP20.02■□□□□ 0.8
TPM1-214ENST00000558544 NSUN6Q8TEA1 469 aaKnown RBP20.02■□□□□ 0.8
TPM1-214ENST00000558544 ARMC5Q96C12 935 aa20.02■□□□□ 0.8
TPM1-214ENST00000558544 PXMP2Q9NR77 195 aa20.02■□□□□ 0.8
TPM1-214ENST00000558544 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.02■□□□□ 0.8
TPM1-214ENST00000558544 KCNJ14Q9UNX9 436 aa20.02■□□□□ 0.8
TPM1-214ENST00000558544 GNA11P29992 359 aa20.01■□□□□ 0.79
TPM1-214ENST00000558544 PRAMEF19Q5SWL8 479 aa20.01■□□□□ 0.79
TPM1-214ENST00000558544 ZNF333Q96JL9 665 aa20.01■□□□□ 0.79
TPM1-214ENST00000558544 PGBD1Q96JS3 809 aa20.01■□□□□ 0.79
TPM1-214ENST00000558544 GLT8D2Q9H1C3 349 aa20.01■□□□□ 0.79
TPM1-214ENST00000558544 TMEM260Q9NX78 707 aa20.01■□□□□ 0.79
TPM1-214ENST00000558544 SPDYE3A6NKU9 549 aa20■□□□□ 0.79
TPM1-214ENST00000558544 SNAI1O95863 264 aaPredicted RBP20■□□□□ 0.79
TPM1-214ENST00000558544 XBP1P17861 261 aa20■□□□□ 0.79
TPM1-214ENST00000558544 CLK2P49760 499 aaKnown RBP20■□□□□ 0.79
TPM1-214ENST00000558544 CUL4AQ13619 759 aa20■□□□□ 0.79
TPM1-214ENST00000558544 MTFR1Q15390 333 aa20■□□□□ 0.79
TPM1-214ENST00000558544 MAP3K21Q5TCX8 1036 aa20■□□□□ 0.79
TPM1-214ENST00000558544 TNS4Q8IZW8 715 aa20■□□□□ 0.79
TPM1-214ENST00000558544 FAM184AQ8NB25 1140 aa20■□□□□ 0.79
TPM1-214ENST00000558544 MPHOSPH6Q99547 160 aaKnown RBP20■□□□□ 0.79
TPM1-214ENST00000558544 LOC102724159A0A0B4J2E5 919 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 CYBAP13498 195 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 EDNRBP24530 442 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 CCND3P30281 292 aaPredicted RBP19.99■□□□□ 0.79
TPM1-214ENST00000558544 PDE4DQ08499 809 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 PGM5Q15124 567 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 PWP2Q15269 919 aaKnown RBP19.99■□□□□ 0.79
TPM1-214ENST00000558544 JAKMIP3Q5VZ66 844 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 EEPD1Q7L9B9 569 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 REXO1Q8N1G1 1221 aaKnown RBP19.99■□□□□ 0.79
TPM1-214ENST00000558544 TRPV1Q8NER1 839 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 IL31RAQ8NI17 732 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 BICD2Q8TD16 824 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 RASGRP4Q8TDF6 673 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 MORC4Q8TE76 937 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 PDCD2LQ9BRP1 358 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 PHF20Q9BVI0 1012 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 ZHX1Q9UKY1 873 aaPredicted RBP19.99■□□□□ 0.79
TPM1-214ENST00000558544 PCDHA6Q9UN73 950 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 PCDHA4Q9UN74 947 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 CNPY2Q9Y2B0 182 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.99■□□□□ 0.79
TPM1-214ENST00000558544 PCDHA8Q9Y5H6 950 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 FRMPD4Q14CM0 1322 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 RPTORQ8N122 1335 aa19.99■□□□□ 0.79
TPM1-214ENST00000558544 B4DLN1 442 aa19.98■□□□□ 0.79
TPM1-214ENST00000558544 GJB2P29033 226 aa19.98■□□□□ 0.79
TPM1-214ENST00000558544 NPY5RQ15761 445 aa19.98■□□□□ 0.79
TPM1-214ENST00000558544 TEX2Q8IWB9 1127 aa19.98■□□□□ 0.79
TPM1-214ENST00000558544 FBXO16Q8IX29 292 aaPredicted RBP19.98■□□□□ 0.79
TPM1-214ENST00000558544 FAM177A1Q8N128 213 aaPredicted RBP19.98■□□□□ 0.79
TPM1-214ENST00000558544 IWS1Q96ST2 819 aa19.98■□□□□ 0.79
TPM1-214ENST00000558544 ANO3Q9BYT9 981 aa19.98■□□□□ 0.79
TPM1-214ENST00000558544 UNC93B1Q9H1C4 597 aa19.98■□□□□ 0.79
TPM1-214ENST00000558544 SMC3Q9UQE7 1217 aa19.98■□□□□ 0.79
TPM1-214ENST00000558544 RBM19Q9Y4C8 960 aaKnown RBP19.98■□□□□ 0.79
TPM1-214ENST00000558544 DOCK5Q9H7D0 1870 aa19.98■□□□□ 0.79
TPM1-214ENST00000558544 NR3C2P08235 984 aa19.97■□□□□ 0.79
TPM1-214ENST00000558544 MYCLP12524 364 aaPredicted RBP19.97■□□□□ 0.79
TPM1-214ENST00000558544 CCL5P13501 91 aa19.97■□□□□ 0.79
TPM1-214ENST00000558544 AP3B2Q13367 1082 aa19.97■□□□□ 0.79
TPM1-214ENST00000558544 ACVR2BQ13705 512 aa19.97■□□□□ 0.79
TPM1-214ENST00000558544 TRIM29Q14134 588 aa19.97■□□□□ 0.79
TPM1-214ENST00000558544 BLIDQ8IZY5 108 aa19.97■□□□□ 0.79
TPM1-214ENST00000558544 DAGLBQ8NCG7 672 aa19.97■□□□□ 0.79
TPM1-214ENST00000558544 KATNBL1Q9H079 304 aa19.97■□□□□ 0.79
TPM1-214ENST00000558544 ABHD16BQ9H3Z7 469 aa19.97■□□□□ 0.79
TPM1-214ENST00000558544 HMX1Q9NP08 348 aaPredicted RBP19.97■□□□□ 0.79
TPM1-214ENST00000558544 FOSP01100 380 aaPredicted RBP19.96■□□□□ 0.79
TPM1-214ENST00000558544 ZNF865P0CJ78 1059 aaPredicted RBP19.96■□□□□ 0.79
TPM1-214ENST00000558544 CNGA1P29973 690 aa19.96■□□□□ 0.79
TPM1-214ENST00000558544 GUCY1B3Q02153 619 aa19.96■□□□□ 0.79
TPM1-214ENST00000558544 KRT40Q6A162 431 aa19.96■□□□□ 0.79
TPM1-214ENST00000558544 GALNT17Q6IS24 598 aa19.96■□□□□ 0.79
TPM1-214ENST00000558544 ABHD8Q96I13 439 aa19.96■□□□□ 0.79
TPM1-214ENST00000558544 C8orf76Q96K31 380 aa19.96■□□□□ 0.79
TPM1-214ENST00000558544 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.96■□□□□ 0.79
TPM1-214ENST00000558544 EHMT1Q9H9B1 1298 aa19.96■□□□□ 0.79
TPM1-214ENST00000558544 FOXD4L1Q9NU39 408 aa19.96■□□□□ 0.79
TPM1-214ENST00000558544 CCND2P30279 289 aa19.95■□□□□ 0.79
TPM1-214ENST00000558544 STXBP2Q15833 593 aa19.95■□□□□ 0.79
TPM1-214ENST00000558544 ZFP91Q96JP5 570 aaPredicted RBP19.95■□□□□ 0.79
TPM1-214ENST00000558544 RNF208Q9H0X6 261 aa19.95■□□□□ 0.79
TPM1-214ENST00000558544 VTA1Q9NP79 307 aa19.95■□□□□ 0.79
TPM1-214ENST00000558544 NRBP1Q9UHY1 535 aa19.95■□□□□ 0.79
TPM1-214ENST00000558544 KIF3AQ9Y496 699 aa19.95■□□□□ 0.79
TPM1-214ENST00000558544 MMP1P03956 469 aa19.95■□□□□ 0.78
TPM1-214ENST00000558544 OXER1Q8TDS5 423 aa19.95■□□□□ 0.78
TPM1-214ENST00000558544 PDGFCQ9NRA1 345 aa19.95■□□□□ 0.78
TPM1-214ENST00000558544 M0R2N6 131 aa19.94■□□□□ 0.78
TPM1-214ENST00000558544 KRT2P35908 639 aa19.94■□□□□ 0.78
TPM1-214ENST00000558544 MRPS9P82933 396 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms