RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 A6NJR5 290 aa15.87■□□□□ 0.13
SNRPA1-204ENST00000558020 RAB30Q15771 203 aa15.87■□□□□ 0.13
SNRPA1-204ENST00000558020 STXBP2Q15833 593 aa15.87■□□□□ 0.13
SNRPA1-204ENST00000558020 RASIP1Q5U651 963 aa15.87■□□□□ 0.13
SNRPA1-204ENST00000558020 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
SNRPA1-204ENST00000558020 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
SNRPA1-204ENST00000558020 ERICH2A1L162 156 aa15.86■□□□□ 0.13
SNRPA1-204ENST00000558020 PFKMP08237 780 aa15.86■□□□□ 0.13
SNRPA1-204ENST00000558020 PTGS1P23219 599 aa15.86■□□□□ 0.13
SNRPA1-204ENST00000558020 CCL23P55773 120 aa15.86■□□□□ 0.13
SNRPA1-204ENST00000558020 PTPN11Q06124 597 aaPredicted RBP15.86■□□□□ 0.13
SNRPA1-204ENST00000558020 FAM47CQ5HY64 1035 aa15.86■□□□□ 0.13
SNRPA1-204ENST00000558020 NFRKBQ6P4R8 1299 aa15.86■□□□□ 0.13
SNRPA1-204ENST00000558020 RMDN3Q96TC7 470 aa15.86■□□□□ 0.13
SNRPA1-204ENST00000558020 AMNQ9BXJ7 453 aa15.86■□□□□ 0.13
SNRPA1-204ENST00000558020 CPVLQ9H3G5 476 aa15.86■□□□□ 0.13
SNRPA1-204ENST00000558020 MAP3K20Q9NYL2 800 aaKnown RBP15.86■□□□□ 0.13
SNRPA1-204ENST00000558020 UNC80Q8N2C7 3258 aa15.86■□□□□ 0.13
SNRPA1-204ENST00000558020 KLRF2D3W0D1 207 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 EIF3JO75822 258 aaKnown RBP15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 GRIN2CQ14957 1233 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 SART3Q15020 963 aaKnown RBP15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 QRICH1Q2TAL8 776 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 NBPF20Q3BBV1 942 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 TTC22Q5TAA0 569 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 ARHGEF16Q5VV41 709 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 OTOP2Q7RTS6 562 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 RETREG2Q8NC44 543 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 SYTL5Q8TDW5 730 aaPredicted RBP15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 GAS2L1Q99501 681 aaPredicted RBP15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 JMJD4Q9H9V9 463 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 NOD1Q9Y239 953 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 SLC4A7Q9Y6M7 1214 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 LRRC37A2A6NM11 1700 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 CUL9Q8IWT3 2517 aa15.85■□□□□ 0.13
SNRPA1-204ENST00000558020 GH1P01241 217 aa15.84■□□□□ 0.13
SNRPA1-204ENST00000558020 ACTN1P12814 892 aa15.84■□□□□ 0.13
SNRPA1-204ENST00000558020 SEPT14Q6ZU15 432 aa15.84■□□□□ 0.13
SNRPA1-204ENST00000558020 SAMD3Q8N6K7 520 aa15.84■□□□□ 0.13
SNRPA1-204ENST00000558020 TAAR1Q96RJ0 339 aa15.84■□□□□ 0.13
SNRPA1-204ENST00000558020 PBX4Q9BYU1 374 aa15.84■□□□□ 0.13
SNRPA1-204ENST00000558020 SLC28A3Q9HAS3 691 aa15.84■□□□□ 0.13
SNRPA1-204ENST00000558020 TRMT13Q9NUP7 481 aaKnown RBP15.84■□□□□ 0.13
SNRPA1-204ENST00000558020 LAMA4Q16363 1823 aa15.84■□□□□ 0.13
SNRPA1-204ENST00000558020 LCTP09848 1927 aa15.84■□□□□ 0.13
SNRPA1-204ENST00000558020 GRXCR1A8MXD5 290 aa15.83■□□□□ 0.12
SNRPA1-204ENST00000558020 CFBP00751 764 aa15.83■□□□□ 0.12
SNRPA1-204ENST00000558020 CASTP20810 708 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-204ENST00000558020 RFC2P35250 354 aa15.83■□□□□ 0.12
SNRPA1-204ENST00000558020 BFSP2Q13515 415 aa15.83■□□□□ 0.12
SNRPA1-204ENST00000558020 CCDC62Q6P9F0 684 aa15.83■□□□□ 0.12
SNRPA1-204ENST00000558020 RALYLQ86SE5 291 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-204ENST00000558020 TBC1D5Q92609 795 aa15.83■□□□□ 0.12
SNRPA1-204ENST00000558020 PCDHA1Q9Y5I3 950 aa15.83■□□□□ 0.12
SNRPA1-204ENST00000558020 UMODL1Q5DID0 1318 aa15.83■□□□□ 0.12
SNRPA1-204ENST00000558020 ZBBXA8MT70 800 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 PITPNM1O00562 1244 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 IFIT3O14879 490 aaKnown RBP15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 ZBTB5O15062 677 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 CYP2C9P11712 490 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 PBX2P40425 430 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 CHMP4BP1P59074 171 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 SEC23AQ15436 765 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 DGKDQ16760 1214 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 KCNV1Q6PIU1 500 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 CCDC155Q8N6L0 562 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 AFG1LQ8WV93 481 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 COPS5Q92905 334 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 WNT8AQ9H1J5 351 aa15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 CXXC1Q9P0U4 656 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-204ENST00000558020 PALM3A6NDB9 673 aaPredicted RBP15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 NR3C2P08235 984 aa15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 EIF2AK2P19525 551 aaKnown RBP15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 CHMLP26374 656 aa15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 LAMC2Q13753 1193 aa15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 LY6KQ17RY6 165 aa15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 CHST3Q7LGC8 479 aa15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 STAG2Q8N3U4 1231 aa15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 NCOA7Q8NI08 942 aa15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 SYMPKQ92797 1274 aaKnown RBP15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 SCLYQ96I15 445 aa15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 COL25A1Q9BXS0 654 aaPredicted RBP15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 PXMP2Q9NR77 195 aa15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 MRVI1Q9Y6F6 885 aa15.81■□□□□ 0.12
SNRPA1-204ENST00000558020 ARIH2O95376 493 aa15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 GSPT1P15170 499 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 ATP2A2P16615 1042 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 PDE4AP27815 886 aa15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 HSD17B4P51659 736 aa15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 WTAPQ15007 396 aa15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 PTGISQ16647 500 aa15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 CYB5R4Q7L1T6 521 aa15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 DEFB128Q7Z7B8 93 aa15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 CATIPQ7Z7H3 387 aa15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 EMID1Q96A84 441 aaPredicted RBP15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 MTMR8Q96EF0 704 aa15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 KATNAL1Q9BW62 490 aa15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 FTOQ9C0B1 505 aaKnown RBP eCLIP15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 COL20A1Q9P218 1284 aa15.8■□□□□ 0.12
SNRPA1-204ENST00000558020 MAD2L2Q9UI95 211 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms