RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 NSUN7Q8NE18 718 aaKnown RBP29.37■■■□□ 2.29
SMAD6-202ENST00000557916 MORC4Q8TE76 937 aa29.37■■■□□ 2.29
SMAD6-202ENST00000557916 CNGA1P29973 690 aa29.36■■■□□ 2.29
SMAD6-202ENST00000557916 ADCY7P51828 1080 aa29.36■■■□□ 2.29
SMAD6-202ENST00000557916 ABHD16BQ9H3Z7 469 aa29.36■■■□□ 2.29
SMAD6-202ENST00000557916 PXMP2Q9NR77 195 aa29.36■■■□□ 2.29
SMAD6-202ENST00000557916 VPS54Q9P1Q0 977 aa29.36■■■□□ 2.29
SMAD6-202ENST00000557916 ORC3Q9UBD5 711 aaPredicted RBP29.36■■■□□ 2.29
SMAD6-202ENST00000557916 EIF2AK2P19525 551 aaKnown RBP29.35■■■□□ 2.29
SMAD6-202ENST00000557916 PDE4DQ08499 809 aa29.35■■■□□ 2.29
SMAD6-202ENST00000557916 UBE2SQ16763 222 aa29.35■■■□□ 2.29
SMAD6-202ENST00000557916 CCDC148Q8NFR7 591 aa29.35■■■□□ 2.29
SMAD6-202ENST00000557916 GLT8D2Q9H1C3 349 aa29.35■■■□□ 2.29
SMAD6-202ENST00000557916 PAK6Q9NQU5 681 aaPredicted RBP29.35■■■□□ 2.29
SMAD6-202ENST00000557916 SH3GLB2Q9NR46 395 aa29.35■■■□□ 2.29
SMAD6-202ENST00000557916 ZHX1Q9UKY1 873 aaPredicted RBP29.35■■■□□ 2.29
SMAD6-202ENST00000557916 EDNRBP24530 442 aa29.34■■■□□ 2.29
SMAD6-202ENST00000557916 ACVR2BQ13705 512 aa29.34■■■□□ 2.29
SMAD6-202ENST00000557916 TEX2Q8IWB9 1127 aa29.34■■■□□ 2.29
SMAD6-202ENST00000557916 AIFM3Q96NN9 605 aa29.34■■■□□ 2.29
SMAD6-202ENST00000557916 IWS1Q96ST2 819 aa29.34■■■□□ 2.29
SMAD6-202ENST00000557916 ZMYND12Q9H0C1 365 aa29.34■■■□□ 2.29
SMAD6-202ENST00000557916 C6orf50Q9HD87 102 aa29.34■■■□□ 2.29
SMAD6-202ENST00000557916 ESYT2A0FGR8 921 aa29.33■■■□□ 2.29
SMAD6-202ENST00000557916 JAK2O60674 1132 aa29.33■■■□□ 2.29
SMAD6-202ENST00000557916 ZNF865P0CJ78 1059 aaPredicted RBP29.33■■■□□ 2.29
SMAD6-202ENST00000557916 FDPSP14324 419 aaKnown RBP29.33■■■□□ 2.29
SMAD6-202ENST00000557916 TMX3Q96JJ7 454 aa29.33■■■□□ 2.29
SMAD6-202ENST00000557916 LLPHQ9BRT6 129 aaKnown RBP29.33■■■□□ 2.29
SMAD6-202ENST00000557916 GJB1P08034 283 aa29.32■■■□□ 2.28
SMAD6-202ENST00000557916 EEPD1Q7L9B9 569 aa29.32■■■□□ 2.28
SMAD6-202ENST00000557916 WASF1Q92558 559 aa29.32■■■□□ 2.28
SMAD6-202ENST00000557916 SHISA4Q96DD7 197 aa29.32■■■□□ 2.28
SMAD6-202ENST00000557916 DEFB118Q96PH6 123 aa29.32■■■□□ 2.28
SMAD6-202ENST00000557916 KATNBL1Q9H079 304 aa29.32■■■□□ 2.28
SMAD6-202ENST00000557916 SEPT4O43236 478 aa29.31■■■□□ 2.28
SMAD6-202ENST00000557916 NR3C2P08235 984 aa29.31■■■□□ 2.28
SMAD6-202ENST00000557916 GNA11P29992 359 aa29.31■■■□□ 2.28
SMAD6-202ENST00000557916 PDCD2LQ9BRP1 358 aa29.31■■■□□ 2.28
SMAD6-202ENST00000557916 MCM3APO60318 1980 aa29.31■■■□□ 2.28
SMAD6-202ENST00000557916 SPDYE3A6NKU9 549 aa29.3■■■□□ 2.28
SMAD6-202ENST00000557916 NLRP5P59047 1200 aa29.3■■■□□ 2.28
SMAD6-202ENST00000557916 PGM5Q15124 567 aa29.3■■■□□ 2.28
SMAD6-202ENST00000557916 FBXO16Q8IX29 292 aaPredicted RBP29.3■■■□□ 2.28
SMAD6-202ENST00000557916 VTA1Q9NP79 307 aa29.3■■■□□ 2.28
SMAD6-202ENST00000557916 STXBP2Q15833 593 aa29.29■■■□□ 2.28
SMAD6-202ENST00000557916 ALG1Q9BT22 464 aa29.29■■■□□ 2.28
SMAD6-202ENST00000557916 DDX20Q9UHI6 824 aaKnown RBP29.29■■■□□ 2.28
SMAD6-202ENST00000557916 FAM184BQ9ULE4 1060 aa29.29■■■□□ 2.28
SMAD6-202ENST00000557916 MYCLP12524 364 aaPredicted RBP29.28■■■□□ 2.28
SMAD6-202ENST00000557916 XBP1P17861 261 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 FAM177A1Q8N128 213 aaPredicted RBP29.28■■■□□ 2.28
SMAD6-202ENST00000557916 BICD2Q8TD16 824 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 U2AF1L4Q8WU68 220 aaKnown RBP29.28■■■□□ 2.28
SMAD6-202ENST00000557916 PCDHA6Q9UN73 950 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 PCDHA8Q9Y5H6 950 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 FRMPD4Q14CM0 1322 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 POTEFA5A3E0 1075 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 MSCO60682 206 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 SGPL1O95470 568 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 AKR1A1P14550 325 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 CLK2P49760 499 aaKnown RBP29.28■■■□□ 2.28
SMAD6-202ENST00000557916 SOX10P56693 466 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 CCDC144BQ3MJ40 725 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 TAPT1Q6NXT6 567 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 VSIG10LQ86VR7 867 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 IL31RAQ8NI17 732 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 TMEM260Q9NX78 707 aa29.28■■■□□ 2.28
SMAD6-202ENST00000557916 FOSP01100 380 aaPredicted RBP29.27■■■□□ 2.28
SMAD6-202ENST00000557916 GJA8P48165 433 aa29.27■■■□□ 2.28
SMAD6-202ENST00000557916 ANO1Q5XXA6 986 aa29.27■■■□□ 2.28
SMAD6-202ENST00000557916 LHX8Q68G74 356 aa29.27■■■□□ 2.28
SMAD6-202ENST00000557916 REXO1Q8N1G1 1221 aaKnown RBP29.27■■■□□ 2.28
SMAD6-202ENST00000557916 PDGFCQ9NRA1 345 aa29.27■■■□□ 2.28
SMAD6-202ENST00000557916 ADAMTS3O15072 1205 aa29.26■■■□□ 2.27
SMAD6-202ENST00000557916 EIF3JO75822 258 aaKnown RBP29.26■■■□□ 2.27
SMAD6-202ENST00000557916 CCND2P30279 289 aa29.26■■■□□ 2.27
SMAD6-202ENST00000557916 HMGN5P82970 282 aaKnown RBP29.26■■■□□ 2.27
SMAD6-202ENST00000557916 AP3B2Q13367 1082 aa29.26■■■□□ 2.27
SMAD6-202ENST00000557916 JAKMIP3Q5VZ66 844 aa29.26■■■□□ 2.27
SMAD6-202ENST00000557916 EHMT1Q9H9B1 1298 aa29.26■■■□□ 2.27
SMAD6-202ENST00000557916 KCNJ14Q9UNX9 436 aa29.26■■■□□ 2.27
SMAD6-202ENST00000557916 ADCYAP1R1P41586 468 aa29.25■■■□□ 2.27
SMAD6-202ENST00000557916 PGBD1Q96JS3 809 aa29.25■■■□□ 2.27
SMAD6-202ENST00000557916 ANO3Q9BYT9 981 aa29.25■■■□□ 2.27
SMAD6-202ENST00000557916 GJB4Q9NTQ9 266 aa29.25■■■□□ 2.27
SMAD6-202ENST00000557916 PCDHA4Q9UN74 947 aa29.25■■■□□ 2.27
SMAD6-202ENST00000557916 KIAA0100Q14667 2235 aaKnown RBP29.24■■■□□ 2.27
SMAD6-202ENST00000557916 TFRCP02786 760 aaKnown RBP29.24■■■□□ 2.27
SMAD6-202ENST00000557916 RARBP10826 455 aa29.24■■■□□ 2.27
SMAD6-202ENST00000557916 MCTP2Q6DN12 878 aa29.24■■■□□ 2.27
SMAD6-202ENST00000557916 IQSEC1Q6DN90 963 aa29.24■■■□□ 2.27
SMAD6-202ENST00000557916 GALNT17Q6IS24 598 aa29.24■■■□□ 2.27
SMAD6-202ENST00000557916 PHF20Q9BVI0 1012 aa29.24■■■□□ 2.27
SMAD6-202ENST00000557916 CRISPLD2Q9H0B8 497 aa29.24■■■□□ 2.27
SMAD6-202ENST00000557916 LRRC37A2A6NM11 1700 aa29.24■■■□□ 2.27
SMAD6-202ENST00000557916 RBM47A0AV96 593 aaKnown RBP29.23■■■□□ 2.27
SMAD6-202ENST00000557916 TNFAIP2Q03169 654 aa29.23■■■□□ 2.27
SMAD6-202ENST00000557916 SEPT14Q6ZU15 432 aa29.23■■■□□ 2.27
SMAD6-202ENST00000557916 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms