RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 VPS54Q9P1Q0 977 aa16.49■□□□□ 0.23
USP3-205ENST00000557884 NRBP1Q9UHY1 535 aa16.49■□□□□ 0.23
USP3-205ENST00000557884 SMCO2A6NFE2 343 aa16.48■□□□□ 0.23
USP3-205ENST00000557884 hCG_1984214I3L0E3 225 aa16.48■□□□□ 0.23
USP3-205ENST00000557884 SEPT4O43236 478 aa16.48■□□□□ 0.23
USP3-205ENST00000557884 JAK2O60674 1132 aa16.48■□□□□ 0.23
USP3-205ENST00000557884 DEXIO95424 95 aa16.48■□□□□ 0.23
USP3-205ENST00000557884 TFRCP02786 760 aaKnown RBP16.48■□□□□ 0.23
USP3-205ENST00000557884 ADCY7P51828 1080 aa16.48■□□□□ 0.23
USP3-205ENST00000557884 SAMD3Q8N6K7 520 aa16.48■□□□□ 0.23
USP3-205ENST00000557884 ZNF713Q8N859 430 aaPredicted RBP16.48■□□□□ 0.23
USP3-205ENST00000557884 MORC4Q8TE76 937 aa16.48■□□□□ 0.23
USP3-205ENST00000557884 SHISA4Q96DD7 197 aa16.48■□□□□ 0.23
USP3-205ENST00000557884 MPHOSPH6Q99547 160 aaKnown RBP16.48■□□□□ 0.23
USP3-205ENST00000557884 KATNBL1Q9H079 304 aa16.48■□□□□ 0.23
USP3-205ENST00000557884 ABHD16BQ9H3Z7 469 aa16.48■□□□□ 0.23
USP3-205ENST00000557884 RIC8AQ9NPQ8 531 aa16.48■□□□□ 0.23
USP3-205ENST00000557884 MAP3K20Q9NYL2 800 aaKnown RBP16.48■□□□□ 0.23
USP3-205ENST00000557884 DDX20Q9UHI6 824 aaKnown RBP16.48■□□□□ 0.23
USP3-205ENST00000557884 PIK3CDO00329 1044 aa16.47■□□□□ 0.23
USP3-205ENST00000557884 SGPL1O95470 568 aa16.47■□□□□ 0.23
USP3-205ENST00000557884 MYCLP12524 364 aaPredicted RBP16.47■□□□□ 0.23
USP3-205ENST00000557884 EDNRBP24530 442 aa16.47■□□□□ 0.23
USP3-205ENST00000557884 GJA8P48165 433 aa16.47■□□□□ 0.23
USP3-205ENST00000557884 MRPL12P52815 198 aaKnown RBP16.47■□□□□ 0.23
USP3-205ENST00000557884 CCDC144BQ3MJ40 725 aa16.47■□□□□ 0.23
USP3-205ENST00000557884 LHX8Q68G74 356 aa16.47■□□□□ 0.23
USP3-205ENST00000557884 NSUN7Q8NE18 718 aaKnown RBP16.47■□□□□ 0.23
USP3-205ENST00000557884 IL31RAQ8NI17 732 aa16.47■□□□□ 0.23
USP3-205ENST00000557884 ZSCAN31Q96LW9 406 aaPredicted RBP16.47■□□□□ 0.23
USP3-205ENST00000557884 PDCD2LQ9BRP1 358 aa16.47■□□□□ 0.23
USP3-205ENST00000557884 PDGFCQ9NRA1 345 aa16.47■□□□□ 0.23
USP3-205ENST00000557884 ORC3Q9UBD5 711 aaPredicted RBP16.47■□□□□ 0.23
USP3-205ENST00000557884 LOC102724159A0A0B4J2E5 919 aa16.46■□□□□ 0.23
USP3-205ENST00000557884 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.46■□□□□ 0.23
USP3-205ENST00000557884 B4DLN1 442 aa16.46■□□□□ 0.23
USP3-205ENST00000557884 ADAMTS3O15072 1205 aa16.46■□□□□ 0.23
USP3-205ENST00000557884 NR3C2P08235 984 aa16.46■□□□□ 0.23
USP3-205ENST00000557884 AKR1A1P14550 325 aa16.46■□□□□ 0.23
USP3-205ENST00000557884 ADCYAP1R1P41586 468 aa16.46■□□□□ 0.23
USP3-205ENST00000557884 PWP2Q15269 919 aaKnown RBP16.46■□□□□ 0.23
USP3-205ENST00000557884 CCDC12Q8WUD4 166 aaPredicted RBP16.46■□□□□ 0.23
USP3-205ENST00000557884 ZFP91Q96JP5 570 aaPredicted RBP16.46■□□□□ 0.23
USP3-205ENST00000557884 PGBD1Q96JS3 809 aa16.46■□□□□ 0.23
USP3-205ENST00000557884 IWS1Q96ST2 819 aa16.46■□□□□ 0.23
USP3-205ENST00000557884 VTA1Q9NP79 307 aa16.46■□□□□ 0.23
USP3-205ENST00000557884 SH2B1Q9NRF2 756 aaPredicted RBP16.46■□□□□ 0.23
USP3-205ENST00000557884 TMEM260Q9NX78 707 aa16.46■□□□□ 0.23
USP3-205ENST00000557884 FAM184BQ9ULE4 1060 aa16.46■□□□□ 0.23
USP3-205ENST00000557884 STK36Q9NRP7 1315 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 ZNFX1Q9P2E3 1918 aaKnown RBP16.45■□□□□ 0.22
USP3-205ENST00000557884 SPDYE3A6NKU9 549 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 ADCY6O43306 1168 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 MYCNP04198 464 aaPredicted RBP16.45■□□□□ 0.22
USP3-205ENST00000557884 RARBP10826 455 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 PTGS1P23219 599 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 FOSBP53539 338 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 PGM5Q15124 567 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 STXBP2Q15833 593 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 TMEM63BQ5T3F8 832 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 TAPT1Q6NXT6 567 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 SEPT14Q6ZU15 432 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 CCDC148Q8NFR7 591 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 CRISPLD2Q9H0B8 497 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 C6orf50Q9HD87 102 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 PLXNA1Q9UIW2 1896 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 LCTP09848 1927 aa16.45■□□□□ 0.22
USP3-205ENST00000557884 MSCO60682 206 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 FDPSP14324 419 aaKnown RBP16.44■□□□□ 0.22
USP3-205ENST00000557884 CCND2P30279 289 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 NLRP5P59047 1200 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 JAKMIP3Q5VZ66 844 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 RASGRP4Q8TDF6 673 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 TMX3Q96JJ7 454 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 ALG1Q9BT22 464 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 ZMYND12Q9H0C1 365 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 GLT8D2Q9H1C3 349 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 GJB4Q9NTQ9 266 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 OGDHLQ9ULD0 1010 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 PCDHA6Q9UN73 950 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 PCDHA8Q9Y5H6 950 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 MYH6P13533 1939 aa16.44■□□□□ 0.22
USP3-205ENST00000557884 ESYT2A0FGR8 921 aa16.43■□□□□ 0.22
USP3-205ENST00000557884 PGK1P00558 417 aa16.43■□□□□ 0.22
USP3-205ENST00000557884 SMPD1P17405 629 aa16.43■□□□□ 0.22
USP3-205ENST00000557884 TNFAIP2Q03169 654 aa16.43■□□□□ 0.22
USP3-205ENST00000557884 GJC2Q5T442 439 aaPredicted RBP16.43■□□□□ 0.22
USP3-205ENST00000557884 VSIG10LQ86VR7 867 aa16.43■□□□□ 0.22
USP3-205ENST00000557884 REXO1Q8N1G1 1221 aaKnown RBP16.43■□□□□ 0.22
USP3-205ENST00000557884 WDR11Q9BZH6 1224 aa16.43■□□□□ 0.22
USP3-205ENST00000557884 XPNPEP3Q9NQH7 507 aa16.43■□□□□ 0.22
USP3-205ENST00000557884 SH3GLB2Q9NR46 395 aa16.43■□□□□ 0.22
USP3-205ENST00000557884 KCNJ14Q9UNX9 436 aa16.43■□□□□ 0.22
USP3-205ENST00000557884 RBBP6Q7Z6E9 1792 aaKnown RBP16.43■□□□□ 0.22
USP3-205ENST00000557884 FRMPD4Q14CM0 1322 aa16.43■□□□□ 0.22
USP3-205ENST00000557884 MKI67P46013 3256 aaKnown RBP16.43■□□□□ 0.22
USP3-205ENST00000557884 KIAA0100Q14667 2235 aaKnown RBP16.42■□□□□ 0.22
USP3-205ENST00000557884 EIF3JO75822 258 aaKnown RBP16.42■□□□□ 0.22
USP3-205ENST00000557884 GNA11P29992 359 aa16.42■□□□□ 0.22
USP3-205ENST00000557884 MCM2P49736 904 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms