RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 TXNP10599 105 aaKnown RBP18.69■□□□□ 0.58
SCFD1-224ENST00000557713 MRPL12P52815 198 aaKnown RBP18.69■□□□□ 0.58
SCFD1-224ENST00000557713 RABGGTBP53611 331 aa18.69■□□□□ 0.58
SCFD1-224ENST00000557713 USH1GQ495M9 461 aa18.69■□□□□ 0.58
SCFD1-224ENST00000557713 CCDC178Q5BJE1 867 aa18.69■□□□□ 0.58
SCFD1-224ENST00000557713 NFRKBQ6P4R8 1299 aa18.69■□□□□ 0.58
SCFD1-224ENST00000557713 CHD1LQ86WJ1 897 aa18.69■□□□□ 0.58
SCFD1-224ENST00000557713 PNMA1Q8ND90 353 aa18.69■□□□□ 0.58
SCFD1-224ENST00000557713 PPM1EQ8WY54 764 aa18.69■□□□□ 0.58
SCFD1-224ENST00000557713 RWDD1Q9H446 243 aaPredicted RBP18.69■□□□□ 0.58
SCFD1-224ENST00000557713 PCDHA11Q9Y5I1 949 aa18.69■□□□□ 0.58
SCFD1-224ENST00000557713 KDM4AO75164 1064 aa18.68■□□□□ 0.58
SCFD1-224ENST00000557713 ARIH2O95376 493 aa18.68■□□□□ 0.58
SCFD1-224ENST00000557713 IGHDP01880 384 aa18.68■□□□□ 0.58
SCFD1-224ENST00000557713 PTPN11Q06124 597 aaPredicted RBP18.68■□□□□ 0.58
SCFD1-224ENST00000557713 TTLL4Q14679 1199 aa18.68■□□□□ 0.58
SCFD1-224ENST00000557713 CCDC62Q6P9F0 684 aa18.68■□□□□ 0.58
SCFD1-224ENST00000557713 PPP1R13LQ8WUF5 828 aa18.68■□□□□ 0.58
SCFD1-224ENST00000557713 GBF1Q92538 1859 aa18.68■□□□□ 0.58
SCFD1-224ENST00000557713 RAD50Q92878 1312 aa18.68■□□□□ 0.58
SCFD1-224ENST00000557713 ZBBXA8MT70 800 aa18.67■□□□□ 0.58
SCFD1-224ENST00000557713 MYOGP15173 224 aa18.67■□□□□ 0.58
SCFD1-224ENST00000557713 NUCB1Q02818 461 aa18.67■□□□□ 0.58
SCFD1-224ENST00000557713 CDC37Q16543 378 aaPredicted RBP18.67■□□□□ 0.58
SCFD1-224ENST00000557713 FAM47CQ5HY64 1035 aa18.67■□□□□ 0.58
SCFD1-224ENST00000557713 CWC27Q6UX04 472 aaKnown RBP18.67■□□□□ 0.58
SCFD1-224ENST00000557713 DEFB128Q7Z7B8 93 aa18.67■□□□□ 0.58
SCFD1-224ENST00000557713 IQCA1Q86XH1 822 aa18.67■□□□□ 0.58
SCFD1-224ENST00000557713 ADGRF4Q8IZF3 695 aa18.67■□□□□ 0.58
SCFD1-224ENST00000557713 ATXN2LQ8WWM7 1075 aaKnown RBP18.67■□□□□ 0.58
SCFD1-224ENST00000557713 TAAR1Q96RJ0 339 aa18.67■□□□□ 0.58
SCFD1-224ENST00000557713 ZSCAN10Q96SZ4 725 aaPredicted RBP18.67■□□□□ 0.58
SCFD1-224ENST00000557713 KAT14Q9H8E8 782 aa18.67■□□□□ 0.58
SCFD1-224ENST00000557713 ZSWIM5Q9P217 1185 aa18.67■□□□□ 0.58
SCFD1-224ENST00000557713 SCN10AQ9Y5Y9 1956 aa18.66■□□□□ 0.58
SCFD1-224ENST00000557713 PITPNM1O00562 1244 aa18.66■□□□□ 0.58
SCFD1-224ENST00000557713 ATP2A2P16615 1042 aaKnown RBP18.66■□□□□ 0.58
SCFD1-224ENST00000557713 IGFBP4P22692 258 aa18.66■□□□□ 0.58
SCFD1-224ENST00000557713 RFC2P35250 354 aa18.66■□□□□ 0.58
SCFD1-224ENST00000557713 CCDC85BQ15834 202 aaPredicted RBP18.66■□□□□ 0.58
SCFD1-224ENST00000557713 ENAHQ8N8S7 591 aaPredicted RBP18.66■□□□□ 0.58
SCFD1-224ENST00000557713 SYTL5Q8TDW5 730 aaPredicted RBP18.66■□□□□ 0.58
SCFD1-224ENST00000557713 COL20A1Q9P218 1284 aa18.66■□□□□ 0.58
SCFD1-224ENST00000557713 ABCB11O95342 1321 aa18.66■□□□□ 0.58
SCFD1-224ENST00000557713 B4E1Z4 1266 aa18.65■□□□□ 0.58
SCFD1-224ENST00000557713 IQCF3P0C7M6 154 aa18.65■□□□□ 0.58
SCFD1-224ENST00000557713 ASPRV1Q53RT3 343 aa18.65■□□□□ 0.58
SCFD1-224ENST00000557713 PPP2R2DQ66LE6 453 aa18.65■□□□□ 0.58
SCFD1-224ENST00000557713 NSUN6Q8TEA1 469 aaKnown RBP18.65■□□□□ 0.58
SCFD1-224ENST00000557713 DSCC1Q9BVC3 393 aa18.65■□□□□ 0.58
SCFD1-224ENST00000557713 LY6KQ17RY6 165 aa18.64■□□□□ 0.57
SCFD1-224ENST00000557713 QRICH1Q2TAL8 776 aa18.64■□□□□ 0.57
SCFD1-224ENST00000557713 MCF2L2Q86YR7 1114 aa18.64■□□□□ 0.57
SCFD1-224ENST00000557713 RETREG2Q8NC44 543 aa18.64■□□□□ 0.57
SCFD1-224ENST00000557713 AFG1LQ8WV93 481 aa18.64■□□□□ 0.57
SCFD1-224ENST00000557713 ASB2Q96Q27 587 aa18.64■□□□□ 0.57
SCFD1-224ENST00000557713 IWS1Q96ST2 819 aa18.64■□□□□ 0.57
SCFD1-224ENST00000557713 JMJD4Q9H9V9 463 aa18.64■□□□□ 0.57
SCFD1-224ENST00000557713 DIAPH3Q9NSV4 1193 aa18.64■□□□□ 0.57
SCFD1-224ENST00000557713 THEGQ9P2T0 379 aa18.64■□□□□ 0.57
SCFD1-224ENST00000557713 LAMA4Q16363 1823 aa18.64■□□□□ 0.57
SCFD1-224ENST00000557713 CHD7Q9P2D1 2997 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 HIP1O00291 1037 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 GH1P01241 217 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 MMP3P08254 477 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 ACTN1P12814 892 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 ARHGAP1Q07960 439 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 STXBP2Q15833 593 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 SEPT14Q6ZU15 432 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 FBXO11Q86XK2 927 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 PHOSPHO2Q8TCD6 241 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 KAT2BQ92831 832 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 CTAGE1Q96RT6 745 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 RMDN3Q96TC7 470 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 VAT1LQ9HCJ6 419 aa18.63■□□□□ 0.57
SCFD1-224ENST00000557713 MRPL11Q9Y3B7 192 aaKnown RBP18.63■□□□□ 0.57
SCFD1-224ENST00000557713 SCN5AQ14524 2016 aa18.62■□□□□ 0.57
SCFD1-224ENST00000557713 TNFRSF10AO00220 468 aa18.62■□□□□ 0.57
SCFD1-224ENST00000557713 PARP1P09874 1014 aaKnown RBP18.62■□□□□ 0.57
SCFD1-224ENST00000557713 MRPS5P82675 430 aaKnown RBP18.62■□□□□ 0.57
SCFD1-224ENST00000557713 BFSP2Q13515 415 aa18.62■□□□□ 0.57
SCFD1-224ENST00000557713 PTGISQ16647 500 aa18.62■□□□□ 0.57
SCFD1-224ENST00000557713 IMMTQ16891 758 aaKnown RBP18.62■□□□□ 0.57
SCFD1-224ENST00000557713 TMEM67Q5HYA8 995 aa18.62■□□□□ 0.57
SCFD1-224ENST00000557713 SESTD1Q86VW0 696 aa18.62■□□□□ 0.57
SCFD1-224ENST00000557713 KRT23Q9C075 422 aa18.62■□□□□ 0.57
SCFD1-224ENST00000557713 CTNNA3Q9UI47 895 aa18.62■□□□□ 0.57
SCFD1-224ENST00000557713 DDX41Q9UJV9 622 aaKnown RBP18.62■□□□□ 0.57
SCFD1-224ENST00000557713 CA3P07451 260 aa18.61■□□□□ 0.57
SCFD1-224ENST00000557713 POU3F3P20264 500 aaPredicted RBP18.61■□□□□ 0.57
SCFD1-224ENST00000557713 GDF6Q6KF10 455 aaPredicted RBP18.61■□□□□ 0.57
SCFD1-224ENST00000557713 SLC9A7Q96T83 725 aa18.61■□□□□ 0.57
SCFD1-224ENST00000557713 FTOQ9C0B1 505 aaKnown RBP eCLIP18.61■□□□□ 0.57
SCFD1-224ENST00000557713 NOD1Q9Y239 953 aa18.61■□□□□ 0.57
SCFD1-224ENST00000557713 TTC28Q96AY4 2481 aa18.61■□□□□ 0.57
SCFD1-224ENST00000557713 OPLAHO14841 1288 aa18.6■□□□□ 0.57
SCFD1-224ENST00000557713 EIF3JO75822 258 aaKnown RBP18.6■□□□□ 0.57
SCFD1-224ENST00000557713 CASTP20810 708 aaKnown RBP18.6■□□□□ 0.57
SCFD1-224ENST00000557713 CHMP4BP1P59074 171 aa18.6■□□□□ 0.57
SCFD1-224ENST00000557713 GHRHRQ02643 423 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms