RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 TBC1D5Q92609 795 aa16.58■□□□□ 0.24
SLIRP-210ENST00000557431 MTG1Q9BT17 334 aaPredicted RBP16.58■□□□□ 0.24
SLIRP-210ENST00000557431 UBA5Q9GZZ9 404 aa16.58■□□□□ 0.24
SLIRP-210ENST00000557431 CA3P07451 260 aa16.57■□□□□ 0.24
SLIRP-210ENST00000557431 COL9A1P20849 921 aa16.57■□□□□ 0.24
SLIRP-210ENST00000557431 CPT1AP50416 773 aa16.57■□□□□ 0.24
SLIRP-210ENST00000557431 ZNF543Q08ER8 600 aa16.57■□□□□ 0.24
SLIRP-210ENST00000557431 PPP2R5BQ15173 497 aa16.57■□□□□ 0.24
SLIRP-210ENST00000557431 MCMDC2Q4G0Z9 681 aa16.57■□□□□ 0.24
SLIRP-210ENST00000557431 ATXN2LQ8WWM7 1075 aaKnown RBP16.57■□□□□ 0.24
SLIRP-210ENST00000557431 ZBTB47Q9UFB7 747 aaPredicted RBP16.57■□□□□ 0.24
SLIRP-210ENST00000557431 NLRC5Q86WI3 1866 aa16.56■□□□□ 0.24
SLIRP-210ENST00000557431 RRP1P56182 461 aaKnown RBP16.56■□□□□ 0.24
SLIRP-210ENST00000557431 TMCO2Q7Z6W1 182 aaPredicted RBP16.56■□□□□ 0.24
SLIRP-210ENST00000557431 RILPL2Q969X0 211 aa16.56■□□□□ 0.24
SLIRP-210ENST00000557431 UHRF1Q96T88 793 aaPredicted RBP16.56■□□□□ 0.24
SLIRP-210ENST00000557431 LNPKQ9C0E8 428 aa16.56■□□□□ 0.24
SLIRP-210ENST00000557431 GPHNQ9NQX3 736 aaPredicted RBP16.56■□□□□ 0.24
SLIRP-210ENST00000557431 PCDHA11Q9Y5I1 949 aa16.56■□□□□ 0.24
SLIRP-210ENST00000557431 KAT6AQ92794 2004 aa16.55■□□□□ 0.24
SLIRP-210ENST00000557431 CCDC171Q6TFL3 1326 aa16.55■□□□□ 0.24
SLIRP-210ENST00000557431 TRIM6-TRIM34B2RNG4 842 aa16.55■□□□□ 0.24
SLIRP-210ENST00000557431 TXNP10599 105 aaKnown RBP16.55■□□□□ 0.24
SLIRP-210ENST00000557431 KCNQ1P51787 676 aa16.55■□□□□ 0.24
SLIRP-210ENST00000557431 MRPS5P82675 430 aaKnown RBP16.55■□□□□ 0.24
SLIRP-210ENST00000557431 SKIV2LQ15477 1246 aaKnown RBP16.55■□□□□ 0.24
SLIRP-210ENST00000557431 CHST3Q7LGC8 479 aa16.55■□□□□ 0.24
SLIRP-210ENST00000557431 TCP11L1Q9NUJ3 509 aa16.55■□□□□ 0.24
SLIRP-210ENST00000557431 COL20A1Q9P218 1284 aa16.55■□□□□ 0.24
SLIRP-210ENST00000557431 ATG2AQ2TAZ0 1938 aa16.55■□□□□ 0.24
SLIRP-210ENST00000557431 IQCF3P0C7M6 154 aa16.54■□□□□ 0.24
SLIRP-210ENST00000557431 SNHG28P0DPA3 235 aa16.54■□□□□ 0.24
SLIRP-210ENST00000557431 EDNRBP24530 442 aa16.54■□□□□ 0.24
SLIRP-210ENST00000557431 TMEM67Q5HYA8 995 aa16.54■□□□□ 0.24
SLIRP-210ENST00000557431 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
SLIRP-210ENST00000557431 SEPT14Q6ZU15 432 aa16.54■□□□□ 0.24
SLIRP-210ENST00000557431 SCFD2Q8WU76 684 aa16.54■□□□□ 0.24
SLIRP-210ENST00000557431 TAAR1Q96RJ0 339 aa16.54■□□□□ 0.24
SLIRP-210ENST00000557431 FTOQ9C0B1 505 aaKnown RBP eCLIP16.54■□□□□ 0.24
SLIRP-210ENST00000557431 WDR19Q8NEZ3 1342 aa16.53■□□□□ 0.24
SLIRP-210ENST00000557431 SUPT20HL2P0C7V6 817 aa16.53■□□□□ 0.24
SLIRP-210ENST00000557431 CDC37Q16543 378 aaPredicted RBP16.53■□□□□ 0.24
SLIRP-210ENST00000557431 LY6KQ17RY6 165 aa16.53■□□□□ 0.24
SLIRP-210ENST00000557431 B4GALNT3Q6L9W6 998 aa16.53■□□□□ 0.24
SLIRP-210ENST00000557431 AFG1LQ8WV93 481 aa16.53■□□□□ 0.24
SLIRP-210ENST00000557431 ARNTL2Q8WYA1 636 aa16.53■□□□□ 0.24
SLIRP-210ENST00000557431 SEZ6LQ9BYH1 1024 aa16.53■□□□□ 0.24
SLIRP-210ENST00000557431 ZMYM6O95789 1325 aa16.52■□□□□ 0.24
SLIRP-210ENST00000557431 A6NJR5 290 aa16.52■□□□□ 0.24
SLIRP-210ENST00000557431 SORBS3O60504 671 aa16.52■□□□□ 0.24
SLIRP-210ENST00000557431 TCTN1Q2MV58 587 aa16.52■□□□□ 0.24
SLIRP-210ENST00000557431 GDF6Q6KF10 455 aaPredicted RBP16.52■□□□□ 0.24
SLIRP-210ENST00000557431 IL27Q8NEV9 243 aa16.52■□□□□ 0.24
SLIRP-210ENST00000557431 CTAGE1Q96RT6 745 aa16.52■□□□□ 0.24
SLIRP-210ENST00000557431 NOD1Q9Y239 953 aa16.52■□□□□ 0.24
SLIRP-210ENST00000557431 MTCH2Q9Y6C9 303 aa16.52■□□□□ 0.24
SLIRP-210ENST00000557431 RAD50Q92878 1312 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 LCHNA4D1U4 455 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 B4E1Z4 1266 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 NKRFO15226 690 aaKnown RBP eCLIP16.51■□□□□ 0.23
SLIRP-210ENST00000557431 KDM4AO75164 1064 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 PFKMP08237 780 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 MMP3P08254 477 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 ACTN1P12814 892 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 TAP1Q03518 808 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 GPNMBQ14956 572 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 PTGISQ16647 500 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 NFRKBQ6P4R8 1299 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 RETREG2Q8NC44 543 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 DNERQ8NFT8 737 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 SYTL5Q8TDW5 730 aaPredicted RBP16.51■□□□□ 0.23
SLIRP-210ENST00000557431 DHX38Q92620 1227 aaKnown RBP16.51■□□□□ 0.23
SLIRP-210ENST00000557431 VAT1LQ9HCJ6 419 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 LOXHD1Q8IVV2 1947 aa16.51■□□□□ 0.23
SLIRP-210ENST00000557431 LOC102724159A0A0B4J2E5 919 aa16.5■□□□□ 0.23
SLIRP-210ENST00000557431 DEFB103AP81534 67 aa16.5■□□□□ 0.23
SLIRP-210ENST00000557431 ARHGAP1Q07960 439 aa16.5■□□□□ 0.23
SLIRP-210ENST00000557431 PWP2Q15269 919 aaKnown RBP16.5■□□□□ 0.23
SLIRP-210ENST00000557431 QRICH1Q2TAL8 776 aa16.5■□□□□ 0.23
SLIRP-210ENST00000557431 BRDTQ58F21 947 aaPredicted RBP16.5■□□□□ 0.23
SLIRP-210ENST00000557431 CCDC62Q6P9F0 684 aa16.5■□□□□ 0.23
SLIRP-210ENST00000557431 HERC6Q8IVU3 1022 aa16.5■□□□□ 0.23
SLIRP-210ENST00000557431 ADGRF4Q8IZF3 695 aa16.5■□□□□ 0.23
SLIRP-210ENST00000557431 PNMA1Q8ND90 353 aa16.5■□□□□ 0.23
SLIRP-210ENST00000557431 KAT2BQ92831 832 aa16.5■□□□□ 0.23
SLIRP-210ENST00000557431 ZFP91Q96JP5 570 aaPredicted RBP16.5■□□□□ 0.23
SLIRP-210ENST00000557431 SLC9A7Q96T83 725 aa16.5■□□□□ 0.23
SLIRP-210ENST00000557431 ALG1Q9BT22 464 aa16.5■□□□□ 0.23
SLIRP-210ENST00000557431 DHX16O60231 1041 aaKnown RBP16.49■□□□□ 0.23
SLIRP-210ENST00000557431 ZNF286BP0CG31 522 aa16.49■□□□□ 0.23
SLIRP-210ENST00000557431 BMP1P13497 986 aa16.49■□□□□ 0.23
SLIRP-210ENST00000557431 EIF2AK2P19525 551 aaKnown RBP16.49■□□□□ 0.23
SLIRP-210ENST00000557431 SDSP20132 328 aa16.49■□□□□ 0.23
SLIRP-210ENST00000557431 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
SLIRP-210ENST00000557431 ESR2Q92731 530 aa16.49■□□□□ 0.23
SLIRP-210ENST00000557431 WNT8BQ93098 351 aa16.49■□□□□ 0.23
SLIRP-210ENST00000557431 TTC14Q96N46 770 aa16.49■□□□□ 0.23
SLIRP-210ENST00000557431 MPHOSPH6Q99547 160 aaKnown RBP16.49■□□□□ 0.23
SLIRP-210ENST00000557431 MYO7AQ13402 2215 aa16.48■□□□□ 0.23
SLIRP-210ENST00000557431 PITPNM1O00562 1244 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms