RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MTIF3Q9H2K0 278 aaKnown RBP18.56■□□□□ 0.56
TUBB3-213ENST00000557262 VAT1LQ9HCJ6 419 aa18.56■□□□□ 0.56
TUBB3-213ENST00000557262 RAD50Q92878 1312 aa18.55■□□□□ 0.56
TUBB3-213ENST00000557262 CUL9Q8IWT3 2517 aa18.55■□□□□ 0.56
TUBB3-213ENST00000557262 A6NJR5 290 aa18.55■□□□□ 0.56
TUBB3-213ENST00000557262 GRXCR1A8MXD5 290 aa18.55■□□□□ 0.56
TUBB3-213ENST00000557262 DHX16O60231 1041 aaKnown RBP18.55■□□□□ 0.56
TUBB3-213ENST00000557262 TTLL4Q14679 1199 aa18.55■□□□□ 0.56
TUBB3-213ENST00000557262 QRICH1Q2TAL8 776 aa18.55■□□□□ 0.56
TUBB3-213ENST00000557262 FBXO11Q86XK2 927 aa18.55■□□□□ 0.56
TUBB3-213ENST00000557262 SYTL5Q8TDW5 730 aaPredicted RBP18.55■□□□□ 0.56
TUBB3-213ENST00000557262 NSUN6Q8TEA1 469 aaKnown RBP18.55■□□□□ 0.56
TUBB3-213ENST00000557262 COPS5Q92905 334 aa18.55■□□□□ 0.56
TUBB3-213ENST00000557262 TAAR1Q96RJ0 339 aa18.55■□□□□ 0.56
TUBB3-213ENST00000557262 PBX4Q9BYU1 374 aa18.55■□□□□ 0.56
TUBB3-213ENST00000557262 JMJD4Q9H9V9 463 aa18.55■□□□□ 0.56
TUBB3-213ENST00000557262 MRPL11Q9Y3B7 192 aaKnown RBP18.55■□□□□ 0.56
TUBB3-213ENST00000557262 PDE4AP27815 886 aa18.54■□□□□ 0.56
TUBB3-213ENST00000557262 NBPF20Q3BBV1 942 aa18.54■□□□□ 0.56
TUBB3-213ENST00000557262 IFIT1BQ5T764 474 aaKnown RBP18.54■□□□□ 0.56
TUBB3-213ENST00000557262 TTC22Q5TAA0 569 aa18.54■□□□□ 0.56
TUBB3-213ENST00000557262 IWS1Q96ST2 819 aa18.54■□□□□ 0.56
TUBB3-213ENST00000557262 WNT8AQ9H1J5 351 aa18.54■□□□□ 0.56
TUBB3-213ENST00000557262 IL25Q9H293 177 aa18.54■□□□□ 0.56
TUBB3-213ENST00000557262 PBX2P40425 430 aa18.53■□□□□ 0.56
TUBB3-213ENST00000557262 CCDC62Q6P9F0 684 aa18.53■□□□□ 0.56
TUBB3-213ENST00000557262 OTOP2Q7RTS6 562 aa18.53■□□□□ 0.56
TUBB3-213ENST00000557262 RUFY2Q8WXA3 655 aa18.53■□□□□ 0.56
TUBB3-213ENST00000557262 TRMT13Q9NUP7 481 aaKnown RBP18.53■□□□□ 0.56
TUBB3-213ENST00000557262 CXXC1Q9P0U4 656 aaPredicted RBP18.53■□□□□ 0.56
TUBB3-213ENST00000557262 MSRAQ9UJ68 235 aa18.53■□□□□ 0.56
TUBB3-213ENST00000557262 LAMA4Q16363 1823 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 ARIH2O95376 493 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 CYP2C9P11712 490 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 GSPT1P15170 499 aaKnown RBP18.52■□□□□ 0.56
TUBB3-213ENST00000557262 PTPN11Q06124 597 aaPredicted RBP18.52■□□□□ 0.56
TUBB3-213ENST00000557262 TRDNQ13061 729 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 SEC23AQ15436 765 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 RAB30Q15771 203 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 STXBP2Q15833 593 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 FAM47CQ5HY64 1035 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 NFRKBQ6P4R8 1299 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 SEPT14Q6ZU15 432 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 STAG2Q8N3U4 1231 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 RMDN3Q96TC7 470 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 AMNQ9BXJ7 453 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 COL25A1Q9BXS0 654 aaPredicted RBP18.52■□□□□ 0.56
TUBB3-213ENST00000557262 COL20A1Q9P218 1284 aa18.52■□□□□ 0.56
TUBB3-213ENST00000557262 KLRF2D3W0D1 207 aa18.51■□□□□ 0.55
TUBB3-213ENST00000557262 ARHGEF16Q5VV41 709 aa18.51■□□□□ 0.55
TUBB3-213ENST00000557262 CYB5R4Q7L1T6 521 aa18.51■□□□□ 0.55
TUBB3-213ENST00000557262 SCLYQ96I15 445 aa18.51■□□□□ 0.55
TUBB3-213ENST00000557262 U3KPZ7 1027 aaPredicted RBP18.51■□□□□ 0.55
TUBB3-213ENST00000557262 CFBP00751 764 aa18.5■□□□□ 0.55
TUBB3-213ENST00000557262 GH1P01241 217 aa18.5■□□□□ 0.55
TUBB3-213ENST00000557262 CHMLP26374 656 aa18.5■□□□□ 0.55
TUBB3-213ENST00000557262 LY6KQ17RY6 165 aa18.5■□□□□ 0.55
TUBB3-213ENST00000557262 VWCEQ96DN2 955 aa18.5■□□□□ 0.55
TUBB3-213ENST00000557262 MTMR8Q96EF0 704 aa18.5■□□□□ 0.55
TUBB3-213ENST00000557262 MAP3K20Q9NYL2 800 aaKnown RBP18.5■□□□□ 0.55
TUBB3-213ENST00000557262 MAD2L2Q9UI95 211 aa18.5■□□□□ 0.55
TUBB3-213ENST00000557262 SLC4A7Q9Y6M7 1214 aa18.5■□□□□ 0.55
TUBB3-213ENST00000557262 PALM3A6NDB9 673 aaPredicted RBP18.49■□□□□ 0.55
TUBB3-213ENST00000557262 EIF3JO75822 258 aaKnown RBP18.49■□□□□ 0.55
TUBB3-213ENST00000557262 NR3C2P08235 984 aa18.49■□□□□ 0.55
TUBB3-213ENST00000557262 PFKMP08237 780 aa18.49■□□□□ 0.55
TUBB3-213ENST00000557262 CYP21A2P08686 494 aa18.49■□□□□ 0.55
TUBB3-213ENST00000557262 PTH1RQ03431 593 aa18.49■□□□□ 0.55
TUBB3-213ENST00000557262 RETREG2Q8NC44 543 aa18.49■□□□□ 0.55
TUBB3-213ENST00000557262 AFG1LQ8WV93 481 aa18.49■□□□□ 0.55
TUBB3-213ENST00000557262 GAS2L1Q99501 681 aaPredicted RBP18.49■□□□□ 0.55
TUBB3-213ENST00000557262 VCANP13611 3396 aa18.48■□□□□ 0.55
TUBB3-213ENST00000557262 ZBTB5O15062 677 aa18.48■□□□□ 0.55
TUBB3-213ENST00000557262 CASTP20810 708 aaKnown RBP18.48■□□□□ 0.55
TUBB3-213ENST00000557262 HSD17B4P51659 736 aa18.48■□□□□ 0.55
TUBB3-213ENST00000557262 ARHGAP1Q07960 439 aa18.48■□□□□ 0.55
TUBB3-213ENST00000557262 SAMD3Q8N6K7 520 aa18.48■□□□□ 0.55
TUBB3-213ENST00000557262 PPP1R13LQ8WUF5 828 aa18.48■□□□□ 0.55
TUBB3-213ENST00000557262 SLC28A3Q9HAS3 691 aa18.48■□□□□ 0.55
TUBB3-213ENST00000557262 PXMP2Q9NR77 195 aa18.48■□□□□ 0.55
TUBB3-213ENST00000557262 DDX41Q9UJV9 622 aaKnown RBP18.48■□□□□ 0.55
TUBB3-213ENST00000557262 PCDHA1Q9Y5I3 950 aa18.48■□□□□ 0.55
TUBB3-213ENST00000557262 ERICH2A1L162 156 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 ZBBXA8MT70 800 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 PITPNM1O00562 1244 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 OPLAHO14841 1288 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 IFIT3O14879 490 aaKnown RBP18.47■□□□□ 0.55
TUBB3-213ENST00000557262 MMP3P08254 477 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 EIF2AK2P19525 551 aaKnown RBP18.47■□□□□ 0.55
TUBB3-213ENST00000557262 RFC2P35250 354 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 CHMP4BP1P59074 171 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 GHRHRQ02643 423 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 TRAF1Q13077 416 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 BFSP2Q13515 415 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 CHST3Q7LGC8 479 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 DEFB128Q7Z7B8 93 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 NKX2-4Q9H2Z4 354 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 PRDM12Q9H4Q4 367 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 RIOX1Q9H6W3 641 aa18.47■□□□□ 0.55
TUBB3-213ENST00000557262 NOD1Q9Y239 953 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms