RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 HLA-CQ95604 372 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 LRFN3Q9BTN0 628 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 FSD1Q9BTV5 496 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 RANBP17Q9H2T7 1088 aaKnown RBP10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 DCTPP1Q9H773 170 aa10.67□□□□□ -0.7
HNRNPC-227ENST00000556897 FRMPD2Q68DX3 1309 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 RAD50Q92878 1312 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 LPXNO60711 386 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 CHMP4BP1P59074 171 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 PDE4DQ08499 809 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 PPP2R5BQ15173 497 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 BRDTQ58F21 947 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 SYDE2Q5VT97 1194 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 TMCO2Q7Z6W1 182 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 DCAF4Q8WV16 495 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 CLEC4DQ8WXI8 215 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 COPS5Q92905 334 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 GPCPD1Q9NPB8 672 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 RCAN3Q9UKA8 241 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 NOD1Q9Y239 953 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 HCN4Q9Y3Q4 1203 aa10.66□□□□□ -0.7
HNRNPC-227ENST00000556897 PIEZO1Q92508 2521 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 TTC41PQ6P2S7 1318 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 MUC6Q6W4X9 2439 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 LOC102724159A0A0B4J2E5 919 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 LCHNA4D1U4 455 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 A6NJR5 290 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 KPNA6O60684 536 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 TXNP10599 105 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 NOVP48745 357 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 RPS6P62753 249 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 BFSP2Q13515 415 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 PWP2Q15269 919 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 TMEM31Q5JXX7 168 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 BTNL9Q6UXG8 535 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 RNF207Q6ZRF8 634 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 PI4K2BQ8TCG2 481 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 OTUD7AQ8TE49 926 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 SCFD2Q8WU76 684 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 KHSRPQ92945 711 aaKnown RBP eCLIP10.65□□□□□ -0.75e-9■■■□□ 18.9
HNRNPC-227ENST00000556897 TANC1Q9C0D5 1861 aa10.65□□□□□ -0.7
HNRNPC-227ENST00000556897 TRIP12Q14669 1992 aaPredicted RBP10.65□□□□□ -0.71
HNRNPC-227ENST00000556897 NKRFO15226 690 aaKnown RBP eCLIP10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 ORC4O43929 436 aa10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 BAIAP3O94812 1187 aa10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 TOP1P11387 765 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 EDNRBP24530 442 aa10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 KCNJ6P48051 423 aa10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 WDR5P61964 334 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 PTPN11Q06124 597 aaPredicted RBP10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 PTGISQ16647 500 aa10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 VPS53Q5VIR6 699 aa10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 GDPD5Q8WTR4 605 aa10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 CTAGE1Q96RT6 745 aa10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 MPHOSPH6Q99547 160 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 TMEM47Q9BQJ4 181 aa10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 C11orf16Q9NQ32 467 aa10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 TOMM22Q9NS69 142 aa10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 ARIH1Q9Y4X5 557 aaPredicted RBP10.64□□□□□ -0.71
HNRNPC-227ENST00000556897 FAM86C2PA6NEL3 165 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 RBAK-RBAKDNI3L0D1 243 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 ARIH2O95376 493 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 PDHBP11177 359 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 DEFB103AP81534 67 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 GPNMBQ14956 572 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 RRP12Q5JTH9 1297 aaKnown RBP10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 DNERQ8NFT8 737 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 AFAP1L1Q8TED9 768 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 AFG1LQ8WV93 481 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 ZBED2Q9BTP6 218 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 CD320Q9NPF0 282 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 ANAPC4Q9UJX5 808 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 MTUS1Q9ULD2 1270 aa10.63□□□□□ -0.71
HNRNPC-227ENST00000556897 PTPRSQ13332 1948 aa10.62□□□□□ -0.71
HNRNPC-227ENST00000556897 FGRP09769 529 aa10.62□□□□□ -0.71
HNRNPC-227ENST00000556897 SELPP16109 830 aa10.62□□□□□ -0.71
HNRNPC-227ENST00000556897 GDF6Q6KF10 455 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-227ENST00000556897 LRRC8DQ7L1W4 858 aa10.62□□□□□ -0.71
HNRNPC-227ENST00000556897 CCDC155Q8N6L0 562 aa10.62□□□□□ -0.71
HNRNPC-227ENST00000556897 CAGE1Q8TC20 777 aa10.62□□□□□ -0.71
HNRNPC-227ENST00000556897 SUGCTQ9HAC7 445 aa10.62□□□□□ -0.71
HNRNPC-227ENST00000556897 PNMA2Q9UL42 364 aa10.62□□□□□ -0.71
HNRNPC-227ENST00000556897 COL4A4P53420 1690 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-227ENST00000556897 WDR19Q8NEZ3 1342 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 B4DLN1 442 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 GPR37L1O60883 481 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 NBNO60934 754 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 GJB5O95377 273 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 MMP3P08254 477 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 MX1P20591 662 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 MRPL12P52815 198 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 ZNF543Q08ER8 600 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 LY6KQ17RY6 165 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 TCTN1Q2MV58 587 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 USH1GQ495M9 461 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 CCDC62Q6P9F0 684 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 SEPT14Q6ZU15 432 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 CHST3Q7LGC8 479 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 SESTD1Q86VW0 696 aa10.61□□□□□ -0.71
HNRNPC-227ENST00000556897 DHX38Q92620 1227 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms