RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 RETREG2Q8NC44 543 aa18.17■□□□□ 0.5
SUPT16H-205ENST00000556217 SCFD2Q8WU76 684 aa18.17■□□□□ 0.5
SUPT16H-205ENST00000556217 TANC1Q9C0D5 1861 aa18.16■□□□□ 0.5
SUPT16H-205ENST00000556217 PITPNM1O00562 1244 aa18.16■□□□□ 0.5
SUPT16H-205ENST00000556217 PTPN11Q06124 597 aaPredicted RBP18.16■□□□□ 0.5
SUPT16H-205ENST00000556217 NBPF20Q3BBV1 942 aa18.16■□□□□ 0.5
SUPT16H-205ENST00000556217 TICAM2Q86XR7 235 aa18.16■□□□□ 0.5
SUPT16H-205ENST00000556217 DNERQ8NFT8 737 aa18.16■□□□□ 0.5
SUPT16H-205ENST00000556217 CLEC4DQ8WXI8 215 aa18.16■□□□□ 0.5
SUPT16H-205ENST00000556217 SLC9A7Q96T83 725 aa18.16■□□□□ 0.5
SUPT16H-205ENST00000556217 PRRC2BQ5JSZ5 2229 aaKnown RBP18.16■□□□□ 0.5
SUPT16H-205ENST00000556217 WDR19Q8NEZ3 1342 aa18.16■□□□□ 0.5
SUPT16H-205ENST00000556217 GTPBP6O43824 516 aaPredicted RBP18.15■□□□□ 0.5
SUPT16H-205ENST00000556217 FGAP02671 866 aa18.15■□□□□ 0.5
SUPT16H-205ENST00000556217 PDHBP11177 359 aa18.15■□□□□ 0.5
SUPT16H-205ENST00000556217 PCP11498 1178 aaKnown RBP18.15■□□□□ 0.5
SUPT16H-205ENST00000556217 RPS6P62753 249 aaKnown RBP18.15■□□□□ 0.5
SUPT16H-205ENST00000556217 MCMDC2Q4G0Z9 681 aa18.15■□□□□ 0.5
SUPT16H-205ENST00000556217 PHOSPHO2Q8TCD6 241 aa18.15■□□□□ 0.5
SUPT16H-205ENST00000556217 VWCEQ96DN2 955 aa18.15■□□□□ 0.5
SUPT16H-205ENST00000556217 TTC14Q96N46 770 aa18.15■□□□□ 0.5
SUPT16H-205ENST00000556217 NOD1Q9Y239 953 aa18.15■□□□□ 0.5
SUPT16H-205ENST00000556217 ZMYM6O95789 1325 aa18.15■□□□□ 0.5
SUPT16H-205ENST00000556217 SALL3Q9BXA9 1300 aa18.15■□□□□ 0.5
SUPT16H-205ENST00000556217 A6NJR5 290 aa18.14■□□□□ 0.49
SUPT16H-205ENST00000556217 CA3P07451 260 aa18.14■□□□□ 0.49
SUPT16H-205ENST00000556217 TXNP10599 105 aaKnown RBP18.14■□□□□ 0.49
SUPT16H-205ENST00000556217 EDNRBP24530 442 aa18.14■□□□□ 0.49
SUPT16H-205ENST00000556217 ZNF543Q08ER8 600 aa18.14■□□□□ 0.49
SUPT16H-205ENST00000556217 BFSP2Q13515 415 aa18.14■□□□□ 0.49
SUPT16H-205ENST00000556217 ANKRD45Q5TZF3 282 aa18.14■□□□□ 0.49
SUPT16H-205ENST00000556217 FTOQ9C0B1 505 aaKnown RBP eCLIP18.14■□□□□ 0.49
SUPT16H-205ENST00000556217 COG5Q9UP83 839 aa18.14■□□□□ 0.49
SUPT16H-205ENST00000556217 KIF28PB7ZC32 967 aa18.13■□□□□ 0.49
SUPT16H-205ENST00000556217 GPR37L1O60883 481 aa18.13■□□□□ 0.49
SUPT16H-205ENST00000556217 IQCF3P0C7M6 154 aa18.13■□□□□ 0.49
SUPT16H-205ENST00000556217 MFSD6Q6ZSS7 791 aa18.13■□□□□ 0.49
SUPT16H-205ENST00000556217 CCDC155Q8N6L0 562 aa18.13■□□□□ 0.49
SUPT16H-205ENST00000556217 TRIP12Q14669 1992 aaPredicted RBP18.13■□□□□ 0.49
SUPT16H-205ENST00000556217 SNHG28P0DPA3 235 aa18.12■□□□□ 0.49
SUPT16H-205ENST00000556217 HSPD1P10809 573 aaKnown RBP18.12■□□□□ 0.49
SUPT16H-205ENST00000556217 POU3F3P20264 500 aaPredicted RBP18.12■□□□□ 0.49
SUPT16H-205ENST00000556217 GPATCH4Q5T3I0 446 aaKnown RBP18.12■□□□□ 0.49
SUPT16H-205ENST00000556217 RGS22Q8NE09 1264 aa18.12■□□□□ 0.49
SUPT16H-205ENST00000556217 FAM227BQ96M60 508 aa18.12■□□□□ 0.49
SUPT16H-205ENST00000556217 MAF1Q9H063 256 aa18.12■□□□□ 0.49
SUPT16H-205ENST00000556217 RNF41Q9H4P4 317 aaPredicted RBP18.12■□□□□ 0.49
SUPT16H-205ENST00000556217 A0A0D9SFI3 127 aa18.11■□□□□ 0.49
SUPT16H-205ENST00000556217 TLL1O43897 1013 aa18.11■□□□□ 0.49
SUPT16H-205ENST00000556217 BAIAP3O94812 1187 aa18.11■□□□□ 0.49
SUPT16H-205ENST00000556217 PDE1AP54750 535 aa18.11■□□□□ 0.49
SUPT16H-205ENST00000556217 HAND2P61296 217 aa18.11■□□□□ 0.49
SUPT16H-205ENST00000556217 USH1GQ495M9 461 aa18.11■□□□□ 0.49
SUPT16H-205ENST00000556217 ALYREFQ86V81 257 aaKnown RBP18.11■□□□□ 0.49
SUPT16H-205ENST00000556217 COPS5Q92905 334 aa18.11■□□□□ 0.49
SUPT16H-205ENST00000556217 MTCH2Q9Y6C9 303 aa18.11■□□□□ 0.49
SUPT16H-205ENST00000556217 TET1Q8NFU7 2136 aa18.1■□□□□ 0.49
SUPT16H-205ENST00000556217 MYH6P13533 1939 aa18.1■□□□□ 0.49
SUPT16H-205ENST00000556217 KIAA1217Q5T5P2 1943 aa18.1■□□□□ 0.49
SUPT16H-205ENST00000556217 KCNJ6P48051 423 aa18.1■□□□□ 0.49
SUPT16H-205ENST00000556217 NT5C2P49902 561 aa18.1■□□□□ 0.49
SUPT16H-205ENST00000556217 MFAP1P55081 439 aaKnown RBP18.1■□□□□ 0.49
SUPT16H-205ENST00000556217 CHMP4BP1P59074 171 aa18.1■□□□□ 0.49
SUPT16H-205ENST00000556217 PTGISQ16647 500 aa18.1■□□□□ 0.49
SUPT16H-205ENST00000556217 HERC6Q8IVU3 1022 aa18.1■□□□□ 0.49
SUPT16H-205ENST00000556217 CAGE1Q8TC20 777 aa18.1■□□□□ 0.49
SUPT16H-205ENST00000556217 ESR2Q92731 530 aa18.1■□□□□ 0.49
SUPT16H-205ENST00000556217 CERS4Q9HA82 394 aa18.1■□□□□ 0.49
SUPT16H-205ENST00000556217 CCDC171Q6TFL3 1326 aa18.09■□□□□ 0.49
SUPT16H-205ENST00000556217 CCDC178Q5BJE1 867 aa18.09■□□□□ 0.49
SUPT16H-205ENST00000556217 AFAP1L1Q8TED9 768 aa18.09■□□□□ 0.49
SUPT16H-205ENST00000556217 ARNTL2Q8WYA1 636 aa18.09■□□□□ 0.49
SUPT16H-205ENST00000556217 ABCB11O95342 1321 aa18.08■□□□□ 0.49
SUPT16H-205ENST00000556217 RFXAPO00287 272 aa18.08■□□□□ 0.48
SUPT16H-205ENST00000556217 PARNO95453 639 aaKnown RBP18.08■□□□□ 0.48
SUPT16H-205ENST00000556217 GH1P01241 217 aa18.08■□□□□ 0.48
SUPT16H-205ENST00000556217 TAP1Q03518 808 aa18.08■□□□□ 0.48
SUPT16H-205ENST00000556217 NMIQ13287 307 aaPredicted RBP18.08■□□□□ 0.48
SUPT16H-205ENST00000556217 ZNF589Q86UQ0 364 aaPredicted RBP18.08■□□□□ 0.48
SUPT16H-205ENST00000556217 SESTD1Q86VW0 696 aa18.08■□□□□ 0.48
SUPT16H-205ENST00000556217 DGKHQ86XP1 1220 aa18.08■□□□□ 0.48
SUPT16H-205ENST00000556217 MCF2L2Q86YR7 1114 aa18.08■□□□□ 0.48
SUPT16H-205ENST00000556217 NSUN6Q8TEA1 469 aaKnown RBP18.08■□□□□ 0.48
SUPT16H-205ENST00000556217 PPP1R13LQ8WUF5 828 aa18.08■□□□□ 0.48
SUPT16H-205ENST00000556217 TRIM6-TRIM34B2RNG4 842 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 ARIH2O95376 493 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 MMP3P08254 477 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 GOLGA8HP0CJ92 632 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 CASTP20810 708 aaKnown RBP18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 STXBP2Q15833 593 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 CDC37Q16543 378 aaPredicted RBP18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 CCDC62Q6P9F0 684 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 SEPT14Q6ZU15 432 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 IQCA1Q86XH1 822 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 AFG1LQ8WV93 481 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 HLA-CQ95604 372 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 IWS1Q96ST2 819 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 C11orf16Q9NQ32 467 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 LAMA4Q16363 1823 aa18.07■□□□□ 0.48
SUPT16H-205ENST00000556217 FAM86C2PA6NEL3 165 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms