RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 MCM3P25205 808 aa16.45■□□□□ 0.22
CUX1-215ENST00000556210 PMS1P54277 932 aaKnown RBP16.45■□□□□ 0.22
CUX1-215ENST00000556210 TMEM132AQ24JP5 1023 aa16.45■□□□□ 0.22
CUX1-215ENST00000556210 CETN3O15182 167 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 ABCB4P21439 1286 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 GUCY2FP51841 1108 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 CKAP4Q07065 602 aaKnown RBP16.44■□□□□ 0.22
CUX1-215ENST00000556210 ARHGAP44Q17R89 818 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 CERS3Q8IU89 383 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 PANX2Q96RD6 677 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 SH2D3AQ9BRG2 576 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 SMARCAL1Q9NZC9 954 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 NPHP3-ACAD11A0A0J9YXS1 232 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 KDM4FA0A1W2PPD8 638 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 ZNF185O15231 689 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 EIF4A3P38919 411 aaKnown RBP16.44■□□□□ 0.22
CUX1-215ENST00000556210 ADAM9Q13443 819 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 PRKG1Q13976 671 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 TMC4Q7Z404 712 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 VPS36Q86VN1 386 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 MYCT1Q8N699 235 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 DUSP10Q9Y6W6 482 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 SHTN1A0MZ66 631 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 ATP2C2O75185 946 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 TTLL1O95922 423 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 ABL1P00519 1130 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 CYP2J2P51589 502 aa16.44■□□□□ 0.22
CUX1-215ENST00000556210 RRP15Q9Y3B9 282 aaKnown RBP16.44■□□□□ 0.22
CUX1-215ENST00000556210 MYO1CO00159 1063 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 MMP10P09238 476 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 CCNE1P24864 410 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 ACTN2P35609 894 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 GPATCH11Q8N954 259 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 MLXIPQ9HAP2 919 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 DNM3Q9UQ16 869 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 TNS2Q63HR2 1409 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 RAD17O75943 681 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 FTCDO95954 541 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 EHHADHQ08426 723 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 GRM4Q14833 912 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 NAA35Q5VZE5 725 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 CACNA1FO60840 1977 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 POTEB3A0JP26 581 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 POTECB2RU33 542 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 ARL6IP4Q66PJ3 421 aaKnown RBP16.43■□□□□ 0.22
CUX1-215ENST00000556210 POTEBQ6S5H4 581 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 FBXL16Q8N461 479 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 PIGOQ8TEQ8 1089 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 LRRC27Q9C0I9 530 aa16.43■□□□□ 0.22
CUX1-215ENST00000556210 TDRD3Q9H7E2 651 aaKnown RBP16.43■□□□□ 0.22
CUX1-215ENST00000556210 SEPT2Q15019 361 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 SLC9C1Q4G0N8 1177 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 WDR78Q5VTH9 848 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 EXOC4Q96A65 974 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 CCDC51Q96ER9 411 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 HAUS4Q9H6D7 363 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 TMEM51Q9NW97 253 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 KCNJ6P48051 423 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 NDST4Q9H3R1 872 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 ADAMTS1Q9UHI8 967 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 SPATA31A5Q5VU36 1347 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 SPATA31A7Q8IWB4 1347 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 NCK2O43639 380 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 KIAA0753Q2KHM9 967 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 AFAP1L1Q8TED9 768 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 FLT1P17948 1338 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 PPIP5K2O43314 1243 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 CYTH3O43739 400 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 CEP104O60308 925 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 PLEKP08567 350 aaPredicted RBP16.42■□□□□ 0.22
CUX1-215ENST00000556210 CTNNBL1Q8WYA6 563 aaPredicted RBP16.42■□□□□ 0.22
CUX1-215ENST00000556210 TRIM9Q9C026 710 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 MAD2L2Q9UI95 211 aa16.42■□□□□ 0.22
CUX1-215ENST00000556210 TRIM66O15016 1216 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 HPDP32754 393 aaPredicted RBP16.41■□□□□ 0.22
CUX1-215ENST00000556210 KCTD16Q68DU8 428 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 C8orf74Q6P047 294 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 FAM133AQ8N9E0 248 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 PACSIN2Q9UNF0 486 aaPredicted RBP16.41■□□□□ 0.22
CUX1-215ENST00000556210 MRFAP1Q9Y605 127 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 TOPAZ1Q8N9V7 1692 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 PRPF6O94906 941 aaKnown RBP16.41■□□□□ 0.22
CUX1-215ENST00000556210 TUBB4BP68371 445 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 ADGRF4Q8IZF3 695 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 PROCA1Q8NCQ7 364 aaPredicted RBP16.41■□□□□ 0.22
CUX1-215ENST00000556210 TBC1D16Q8TBP0 767 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 DAGLAQ9Y4D2 1042 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 BBOX1O75936 387 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 ATP1A1P05023 1023 aaKnown RBP16.41■□□□□ 0.22
CUX1-215ENST00000556210 POTEIP0CG38 1075 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 MYCLP12524 364 aaPredicted RBP16.41■□□□□ 0.22
CUX1-215ENST00000556210 NR2F2P24468 414 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 EEF1GP26641 437 aaKnown RBP16.41■□□□□ 0.22
CUX1-215ENST00000556210 GJC1P36383 396 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 SFMBT2Q5VUG0 894 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 POTEGQ6S5H5 508 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 POTEEQ6S8J3 1075 aa16.41■□□□□ 0.22
CUX1-215ENST00000556210 CCDC84Q86UT8 332 aaPredicted RBP16.41■□□□□ 0.22
CUX1-215ENST00000556210 NOA1Q8NC60 698 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms