RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 PGK2P07205 417 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 XRCC5P13010 732 aaKnown RBP14.23□□□□□ -0.13
SHMT2-221ENST00000555773 CTGFP29279 349 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 RGS2P41220 211 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 TRAPPC10P48553 1259 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 USP11P51784 963 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 PRMT2P55345 433 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 CNTN2Q02246 1040 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 ARHGEF16Q5VV41 709 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 PIK3AP1Q6ZUJ8 805 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 MSL3Q8N5Y2 521 aaKnown RBP14.23□□□□□ -0.13
SHMT2-221ENST00000555773 NAP1L4Q99733 375 aaKnown RBP14.23□□□□□ -0.13
SHMT2-221ENST00000555773 ARHGAP39Q9C0H5 1083 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 PXMP2Q9NR77 195 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 CEP350Q5VT06 3117 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 RPTORQ8N122 1335 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 SOWAHBA6NEL2 793 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 KIF28PB7ZC32 967 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 F13A1P00488 732 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 CYP3A4P08684 503 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 SREBF1P36956 1147 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 RESTQ13127 1097 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 VSIG10LQ86VR7 867 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 CD99L2Q8TCZ2 262 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 TBCKQ8TEA7 893 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 PDCD2LQ9BRP1 358 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 SRRDQ9UH36 339 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 TSKSQ9UJT2 592 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 NOL7Q9UMY1 257 aaKnown RBP14.22□□□□□ -0.13
SHMT2-221ENST00000555773 ZDHHC9Q9Y397 364 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 ATP6V1DQ9Y5K8 247 aa14.22□□□□□ -0.13
SHMT2-221ENST00000555773 FRMPD4Q14CM0 1322 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 STAM2O75886 525 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 NR3C2P08235 984 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 CTCFP49711 727 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-221ENST00000555773 ALDH5A1P51649 535 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-221ENST00000555773 ARHGAP4P98171 946 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 IRF5Q13568 498 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 PKP1Q13835 747 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 RILPL1Q5EBL4 403 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 EARS2Q5JPH6 523 aaKnown RBP14.21□□□□□ -0.13
SHMT2-221ENST00000555773 PCNX4Q63HM2 1172 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 MAMDC4Q6UXC1 1216 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 NEK8Q86SG6 692 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 FERMT3Q86UX7 667 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 TRMT44Q8IYL2 757 aaKnown RBP14.21□□□□□ -0.13
SHMT2-221ENST00000555773 MORC4Q8TE76 937 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 CRYGNQ8WXF5 182 aa14.21□□□□□ -0.13
SHMT2-221ENST00000555773 PURBQ96QR8 312 aaKnown RBP14.21□□□□□ -0.13
SHMT2-221ENST00000555773 EIF3JO75822 258 aaKnown RBP14.2□□□□□ -0.14
SHMT2-221ENST00000555773 ECM2O94769 699 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-221ENST00000555773 EIF2AK2P19525 551 aaKnown RBP14.2□□□□□ -0.14
SHMT2-221ENST00000555773 CYP2B6P20813 491 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 EDNRBP24530 442 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 CCND2P30279 289 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 CIITAP33076 1130 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 FLT3LGP49771 235 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 PGM5Q15124 567 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 STXBP2Q15833 593 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 INF2Q27J81 1249 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 OLFML2BQ68BL8 750 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 ATL3Q6DD88 541 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 PPP4R3AQ6IN85 833 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 MOXD1Q6UVY6 613 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 MAML3Q96JK9 1138 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 PGBD1Q96JS3 809 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 FGD4Q96M96 766 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 APBA2Q99767 749 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 PCNTO95613 3336 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 SMCHD1A6NHR9 2005 aa14.2□□□□□ -0.14
SHMT2-221ENST00000555773 COL11A1P12107 1806 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-221ENST00000555773 CYP3A7-CYP3A51PA0A087WV96 503 aa14.19□□□□□ -0.14
SHMT2-221ENST00000555773 FOXN1O15353 648 aa14.19□□□□□ -0.14
SHMT2-221ENST00000555773 HSPA1AP0DMV8 641 aaKnown RBP14.19□□□□□ -0.14
SHMT2-221ENST00000555773 HSPA1BP0DMV9 641 aaKnown RBP14.19□□□□□ -0.14
SHMT2-221ENST00000555773 HSPA8P11142 646 aaKnown RBP14.19□□□□□ -0.14
SHMT2-221ENST00000555773 GCFC2P16383 781 aaKnown RBP14.19□□□□□ -0.14
SHMT2-221ENST00000555773 CYP3A7P24462 503 aa14.19□□□□□ -0.14
SHMT2-221ENST00000555773 PRKCZQ05513 592 aa14.19□□□□□ -0.14
SHMT2-221ENST00000555773 PDE4DQ08499 809 aa14.19□□□□□ -0.14
SHMT2-221ENST00000555773 ORC2Q13416 577 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-221ENST00000555773 MYSM1Q5VVJ2 828 aa14.19□□□□□ -0.14
SHMT2-221ENST00000555773 NPLOC4Q8TAT6 608 aa14.19□□□□□ -0.14
SHMT2-221ENST00000555773 GABRQQ9UN88 632 aa14.19□□□□□ -0.14
SHMT2-221ENST00000555773 ASTN1O14525 1302 aa14.18□□□□□ -0.14
SHMT2-221ENST00000555773 SYNGAP1Q96PV0 1343 aa14.18□□□□□ -0.14
SHMT2-221ENST00000555773 MYH6P13533 1939 aa14.18□□□□□ -0.14
SHMT2-221ENST00000555773 MAFGO15525 162 aa14.18□□□□□ -0.14
SHMT2-221ENST00000555773 MYCLP12524 364 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-221ENST00000555773 ZNF76P36508 570 aa14.18□□□□□ -0.14
SHMT2-221ENST00000555773 CAP1Q01518 475 aa14.18□□□□□ -0.14
SHMT2-221ENST00000555773 LETM2Q2VYF4 491 aa14.18□□□□□ -0.14
SHMT2-221ENST00000555773 CEP55Q53EZ4 464 aa14.18□□□□□ -0.14
SHMT2-221ENST00000555773 FOXD4L5Q5VV16 416 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-221ENST00000555773 NIPA1Q7RTP0 329 aa14.18□□□□□ -0.14
SHMT2-221ENST00000555773 PXYLP1Q8TE99 480 aa14.18□□□□□ -0.14
SHMT2-221ENST00000555773 FOXD4L4Q8WXT5 416 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-221ENST00000555773 ZNF396Q96N95 335 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-221ENST00000555773 TINF2Q9BSI4 451 aa14.18□□□□□ -0.14
SHMT2-221ENST00000555773 FAM205CA6NFA0 338 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms