RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 FAM86B2P0C5J1 330 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 PLCG1P19174 1290 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 TECP42680 631 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 SEMA3FQ13275 785 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 KCNB1Q14721 858 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 CCDC144BQ3MJ40 725 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 CABP7Q86V35 215 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 ENOX1Q8TC92 643 aaKnown RBP10.05□□□□□ -0.8
TDP1-210ENST00000554976 KLRG1Q96E93 195 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 ADAMTS5Q9UNA0 930 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 ICAM1P05362 532 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 TPM2P07951 284 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 PTPRAP18433 802 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 ERCC5P28715 1186 aaPredicted RBP10.05□□□□□ -0.8
TDP1-210ENST00000554976 AFMP43652 599 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 MYL5Q02045 173 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 USH1GQ495M9 461 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 COBLL1Q53SF7 1204 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 ARHGAP27Q6ZUM4 889 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 CHURC1Q8WUH1 139 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 C7orf25Q9BPX7 421 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 INTS13Q9NVM9 706 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 GGA3Q9NZ52 723 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 ABCB11O95342 1321 aa10.05□□□□□ -0.8
TDP1-210ENST00000554976 SMTNL1A8MU46 457 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 H7C1D1 291 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 TBX3O15119 743 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 ARHGAP4P98171 946 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 EHHADHQ08426 723 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.04□□□□□ -0.8
TDP1-210ENST00000554976 TBC1D5Q92609 795 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 BLZF1Q9H2G9 400 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 SLC38A10Q9HBR0 1119 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 VAV3Q9UKW4 847 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 SMC2O95347 1197 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 FOSP01100 380 aaPredicted RBP10.04□□□□□ -0.8
TDP1-210ENST00000554976 VCAM1P19320 739 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 STAT6P42226 847 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 CDKAL1Q5VV42 579 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 GJA10Q969M2 543 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 L3MBTL3Q96JM7 780 aaPredicted RBP10.04□□□□□ -0.8
TDP1-210ENST00000554976 NRBP1Q9UHY1 535 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 FZD1Q9UP38 647 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 POTEMA6NI47 508 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 RHOBTB3O94955 611 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 RPN1P04843 607 aaKnown RBP10.04□□□□□ -0.8
TDP1-210ENST00000554976 ATP1A3P13637 1013 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 ZNF658Q5TYW1 1059 aaPredicted RBP10.04□□□□□ -0.8
TDP1-210ENST00000554976 KCNK18Q7Z418 384 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 STAMQ92783 540 aa10.04□□□□□ -0.8
TDP1-210ENST00000554976 KIAA1217Q5T5P2 1943 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 GOLGA6L19H0YKK7 550 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 RAD21O60216 631 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 USP2O75604 605 aaPredicted RBP10.03□□□□□ -0.8
TDP1-210ENST00000554976 DDNO94850 711 aaPredicted RBP10.03□□□□□ -0.8
TDP1-210ENST00000554976 TXKP42681 527 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 MTMR2Q13614 643 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 ZYXQ15942 572 aaKnown RBP10.03□□□□□ -0.8
TDP1-210ENST00000554976 RRAGBQ5VZM2 374 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 DCAF15Q66K64 600 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 B3GNT9Q6UX72 402 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 LDHDQ86WU2 507 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 KIFC2Q96AC6 838 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 TRIM44Q96DX7 344 aaPredicted RBP10.03□□□□□ -0.8
TDP1-210ENST00000554976 SLF1Q9BQI6 1058 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 TRIM9Q9C026 710 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 TTC12Q9H892 705 aaPredicted RBP10.03□□□□□ -0.8
TDP1-210ENST00000554976 COL20A1Q9P218 1284 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 TXLNAP40222 546 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 BACE1P56817 501 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 SH3D19Q5HYK7 790 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 ZKSCAN4Q969J2 545 aaPredicted RBP10.03□□□□□ -0.8
TDP1-210ENST00000554976 WNK4Q96J92 1243 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 ADARB2Q9NS39 739 aaKnown RBP10.03□□□□□ -0.8
TDP1-210ENST00000554976 FANCLQ9NW38 375 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 STK17AQ9UEE5 414 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 PPP1R9AQ9ULJ8 1098 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 AFG3L2Q9Y4W6 797 aa10.03□□□□□ -0.8
TDP1-210ENST00000554976 HOXA13P31271 388 aaPredicted RBP10.02□□□□□ -0.8
TDP1-210ENST00000554976 KMT5BQ4FZB7 885 aa10.02□□□□□ -0.8
TDP1-210ENST00000554976 PRAMEF18Q5VWM3 479 aa10.02□□□□□ -0.8
TDP1-210ENST00000554976 CCDC174Q6PII3 467 aa10.02□□□□□ -0.8
TDP1-210ENST00000554976 POTEEQ6S8J3 1075 aa10.02□□□□□ -0.8
TDP1-210ENST00000554976 GIMAP8Q8ND71 665 aaPredicted RBP10.02□□□□□ -0.8
TDP1-210ENST00000554976 RAD54LQ92698 747 aa10.02□□□□□ -0.8
TDP1-210ENST00000554976 XPO4Q9C0E2 1151 aaKnown RBP10.02□□□□□ -0.8
TDP1-210ENST00000554976 LRWD1Q9UFC0 647 aa10.02□□□□□ -0.8
TDP1-210ENST00000554976 SNCAIPQ9Y6H5 919 aa10.02□□□□□ -0.8
TDP1-210ENST00000554976 DOCK5Q9H7D0 1870 aa10.02□□□□□ -0.81
TDP1-210ENST00000554976 MSH4O15457 936 aa10.02□□□□□ -0.81
TDP1-210ENST00000554976 UBA7P41226 1012 aa10.02□□□□□ -0.81
TDP1-210ENST00000554976 FANCCQ00597 558 aa10.02□□□□□ -0.81
TDP1-210ENST00000554976 TRAF1Q13077 416 aa10.02□□□□□ -0.81
TDP1-210ENST00000554976 SMYD4Q8IYR2 804 aaPredicted RBP10.02□□□□□ -0.81
TDP1-210ENST00000554976 PRPF38AQ8NAV1 312 aaKnown RBP10.02□□□□□ -0.81
TDP1-210ENST00000554976 HOOK2Q96ED9 719 aa10.02□□□□□ -0.81
TDP1-210ENST00000554976 AGBL1Q96MI9 1066 aa10.02□□□□□ -0.81
TDP1-210ENST00000554976 TRIM5Q9C035 493 aa10.02□□□□□ -0.81
TDP1-210ENST00000554976 DACH1Q9UI36 760 aa10.02□□□□□ -0.81
TDP1-210ENST00000554976 BECN2A8MW95 431 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms