RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 STK36Q9NRP7 1315 aa19.77■□□□□ 0.76
SHOX-204ENST00000554971 ZBTB5O15062 677 aa19.76■□□□□ 0.75
SHOX-204ENST00000554971 FKTNO75072 461 aa19.76■□□□□ 0.75
SHOX-204ENST00000554971 ERCC3P19447 782 aa19.76■□□□□ 0.75
SHOX-204ENST00000554971 CMA1P23946 247 aa19.76■□□□□ 0.75
SHOX-204ENST00000554971 CD99L2Q8TCZ2 262 aa19.76■□□□□ 0.75
SHOX-204ENST00000554971 PHKBQ93100 1093 aa19.76■□□□□ 0.75
SHOX-204ENST00000554971 MAP7D2Q96T17 732 aa19.76■□□□□ 0.75
SHOX-204ENST00000554971 NEMFO60524 1076 aa19.76■□□□□ 0.75
SHOX-204ENST00000554971 CTCFP49711 727 aaPredicted RBP19.76■□□□□ 0.75
SHOX-204ENST00000554971 ANO1Q5XXA6 986 aa19.76■□□□□ 0.75
SHOX-204ENST00000554971 CEP57L1Q8IYX8 460 aa19.76■□□□□ 0.75
SHOX-204ENST00000554971 TIGD1Q96MW7 591 aa19.76■□□□□ 0.75
SHOX-204ENST00000554971 ZNF830Q96NB3 372 aaPredicted RBP19.76■□□□□ 0.75
SHOX-204ENST00000554971 BPIFA3Q9BQP9 254 aa19.76■□□□□ 0.75
SHOX-204ENST00000554971 CCDC196A0A1B0GTZ2 297 aa19.75■□□□□ 0.75
SHOX-204ENST00000554971 FOSBP53539 338 aa19.75■□□□□ 0.75
SHOX-204ENST00000554971 SLC39A14Q15043 492 aa19.75■□□□□ 0.75
SHOX-204ENST00000554971 FTOQ9C0B1 505 aaKnown RBP eCLIP19.75■□□□□ 0.75
SHOX-204ENST00000554971 RBBP6Q7Z6E9 1792 aaKnown RBP19.75■□□□□ 0.75
SHOX-204ENST00000554971 DNAH12Q6ZR08 3092 aa19.75■□□□□ 0.75
SHOX-204ENST00000554971 PLXNA1Q9UIW2 1896 aa19.75■□□□□ 0.75
SHOX-204ENST00000554971 PPP6R2O75170 966 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 IFNAR1P17181 557 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 PSMC4P43686 418 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 USH1GQ495M9 461 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 DNTTIP2Q5QJE6 756 aaKnown RBP19.74■□□□□ 0.75
SHOX-204ENST00000554971 MTERF4Q7Z6M4 381 aaKnown RBP19.74■□□□□ 0.75
SHOX-204ENST00000554971 SDF4Q9BRK5 362 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 ALG1Q9BT22 464 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 HOMER2Q9NSB8 354 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 CCPG1Q9ULG6 757 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 PNMA6FA0A0J9YX94 578 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 BECN2A8MW95 431 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 TRIM29Q14134 588 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 DHX8Q14562 1220 aaKnown RBP19.74■□□□□ 0.75
SHOX-204ENST00000554971 MUM1L1Q5H9M0 696 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 GPR142Q7Z601 462 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 NCAPG2Q86XI2 1143 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 SHCBP1Q8NEM2 672 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 KCNF1Q9H3M0 494 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 CTDP1Q9Y5B0 961 aaPredicted RBP19.74■□□□□ 0.75
SHOX-204ENST00000554971 CLIC4Q9Y696 253 aa19.74■□□□□ 0.75
SHOX-204ENST00000554971 UQCRHLA0A096LP55 91 aa19.73■□□□□ 0.75
SHOX-204ENST00000554971 UQCRHP07919 91 aa19.73■□□□□ 0.75
SHOX-204ENST00000554971 U2AF2P26368 475 aaKnown RBP eCLIP19.73■□□□□ 0.75
SHOX-204ENST00000554971 CCNA1P78396 465 aa19.73■□□□□ 0.75
SHOX-204ENST00000554971 V9GY48 417 aaPredicted RBP19.73■□□□□ 0.75
SHOX-204ENST00000554971 ZNF236Q9UL36 1845 aa19.73■□□□□ 0.75
SHOX-204ENST00000554971 OPLAHO14841 1288 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 SLC25A27O95847 323 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 ALAS1P13196 640 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 HSP90AA2PQ14568 343 aaPredicted RBP19.72■□□□□ 0.75
SHOX-204ENST00000554971 ZRSR1Q15695 479 aaKnown RBP19.72■□□□□ 0.75
SHOX-204ENST00000554971 PKN1Q16512 942 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 DRC7Q8IY82 874 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 SPC24Q8NBT2 197 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 MYRIPQ8NFW9 859 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 RRP36Q96EU6 259 aaKnown RBP19.72■□□□□ 0.75
SHOX-204ENST00000554971 KIAA1468Q9P260 1216 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 FAM237AA0A1B0GTK4 181 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 NFIBO00712 420 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 MAPK4P31152 587 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 KRT40Q6A162 431 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 FBXO11Q86XK2 927 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 CLEC4DQ8WXI8 215 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 COA7Q96BR5 231 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 TRERF1Q96PN7 1200 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 MROH8Q9H579 483 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.72■□□□□ 0.75
SHOX-204ENST00000554971 RNF146Q9NTX7 359 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 MCM3APO60318 1980 aa19.72■□□□□ 0.75
SHOX-204ENST00000554971 AXDND1Q5T1B0 1012 aaPredicted RBP19.71■□□□□ 0.75
SHOX-204ENST00000554971 WDR78Q5VTH9 848 aa19.71■□□□□ 0.75
SHOX-204ENST00000554971 TYW1BQ6NUM6 668 aa19.71■□□□□ 0.75
SHOX-204ENST00000554971 ELOA2Q8IYF1 753 aaPredicted RBP19.71■□□□□ 0.75
SHOX-204ENST00000554971 SHISA4Q96DD7 197 aa19.71■□□□□ 0.75
SHOX-204ENST00000554971 ERO1AQ96HE7 468 aa19.71■□□□□ 0.75
SHOX-204ENST00000554971 AMNQ9BXJ7 453 aa19.71■□□□□ 0.75
SHOX-204ENST00000554971 GJD2Q9UKL4 321 aa19.71■□□□□ 0.75
SHOX-204ENST00000554971 PCDHA1Q9Y5I3 950 aa19.71■□□□□ 0.75
SHOX-204ENST00000554971 TNPO2O14787 897 aaKnown RBP19.7■□□□□ 0.74
SHOX-204ENST00000554971 GTF2F1P35269 517 aaKnown RBP eCLIP19.7■□□□□ 0.74
SHOX-204ENST00000554971 NDUFA8P51970 172 aa19.7■□□□□ 0.74
SHOX-204ENST00000554971 SSRP1Q08945 709 aaKnown RBP19.7■□□□□ 0.74
SHOX-204ENST00000554971 CCDC186Q7Z3E2 898 aa19.7■□□□□ 0.74
SHOX-204ENST00000554971 GPKOWQ92917 476 aaPredicted RBP eCLIP19.7■□□□□ 0.74
SHOX-204ENST00000554971 SLC26A6Q9BXS9 759 aa19.7■□□□□ 0.74
SHOX-204ENST00000554971 RNF26Q9BY78 433 aaPredicted RBP19.7■□□□□ 0.74
SHOX-204ENST00000554971 PDCL3Q9H2J4 239 aa19.7■□□□□ 0.74
SHOX-204ENST00000554971 PRPF3O43395 683 aaKnown RBP19.7■□□□□ 0.74
SHOX-204ENST00000554971 FMNL1O95466 1100 aaPredicted RBP19.7■□□□□ 0.74
SHOX-204ENST00000554971 FCGRTP55899 365 aa19.7■□□□□ 0.74
SHOX-204ENST00000554971 GRB14Q14449 540 aa19.7■□□□□ 0.74
SHOX-204ENST00000554971 WWC2Q6AWC2 1192 aa19.7■□□□□ 0.74
SHOX-204ENST00000554971 C11orf57Q6ZUT1 292 aaPredicted RBP19.7■□□□□ 0.74
SHOX-204ENST00000554971 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.7■□□□□ 0.74
SHOX-204ENST00000554971 PLEKHH3Q7Z736 793 aa19.7■□□□□ 0.74
SHOX-204ENST00000554971 SEC63Q9UGP8 760 aaKnown RBP19.7■□□□□ 0.74
SHOX-204ENST00000554971 GABRQQ9UN88 632 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms