RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 SPRYD3Q8NCJ5 442 aa18.8■□□□□ 0.6
SPTLC2-203ENST00000554901 TAAR1Q96RJ0 339 aa18.8■□□□□ 0.6
SPTLC2-203ENST00000554901 PCDHA6Q9UN73 950 aa18.8■□□□□ 0.6
SPTLC2-203ENST00000554901 PCDHA8Q9Y5H6 950 aa18.8■□□□□ 0.6
SPTLC2-203ENST00000554901 RPTORQ8N122 1335 aa18.8■□□□□ 0.6
SPTLC2-203ENST00000554901 SOWAHBA6NEL2 793 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 STX6O43752 255 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 ECM2O94769 699 aaPredicted RBP18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 U2AF2P26368 475 aaKnown RBP eCLIP18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 ALDH5A1P51649 535 aaPredicted RBP18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 FOSBP53539 338 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 GUCY1B3Q02153 619 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 ARHGEF16Q5VV41 709 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 OLFML2BQ68BL8 750 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 XRRA1Q6P2D8 792 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 MAMDC4Q6UXC1 1216 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 MORC4Q8TE76 937 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 MAML3Q96JK9 1138 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 ANO3Q9BYT9 981 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 PRDM10Q9NQV6 1147 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 PXMP2Q9NR77 195 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 GABRQQ9UN88 632 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 TRIM17Q9Y577 477 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 DOCK3Q8IZD9 2030 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 ZNFX1Q9P2E3 1918 aaKnown RBP18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 CASP8AP2Q9UKL3 1982 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 CCDC194A0A1B0GVG4 234 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 BTBD18B2RXH4 712 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 CYP2B6P20813 491 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 EDNRBP24530 442 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 JAKMIP3Q5VZ66 844 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 PXYLP1Q8TE99 480 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 TNFRSF25Q93038 417 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 FGD4Q96M96 766 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 IPO9Q96P70 1041 aaKnown RBP18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 PDCD2LQ9BRP1 358 aa18.79■□□□□ 0.6
SPTLC2-203ENST00000554901 ZSWIM8A7E2V4 1837 aa18.78■□□□□ 0.6
SPTLC2-203ENST00000554901 SREBF1P36956 1147 aa18.78■□□□□ 0.6
SPTLC2-203ENST00000554901 GNL2Q13823 731 aaKnown RBP18.78■□□□□ 0.6
SPTLC2-203ENST00000554901 NONOQ15233 471 aaKnown RBP eCLIP18.78■□□□□ 0.6
SPTLC2-203ENST00000554901 CTU1Q7Z7A3 348 aaKnown RBP18.78■□□□□ 0.6
SPTLC2-203ENST00000554901 NPLOC4Q8TAT6 608 aa18.78■□□□□ 0.6
SPTLC2-203ENST00000554901 OXER1Q8TDS5 423 aa18.78■□□□□ 0.6
SPTLC2-203ENST00000554901 TMEM260Q9NX78 707 aa18.78■□□□□ 0.6
SPTLC2-203ENST00000554901 ASTN1O14525 1302 aa18.78■□□□□ 0.6
SPTLC2-203ENST00000554901 SYNGAP1Q96PV0 1343 aa18.78■□□□□ 0.6
SPTLC2-203ENST00000554901 VPS37CA5D8V6 355 aaPredicted RBP18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 ADAMTS3O15072 1205 aa18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 STAM2O75886 525 aa18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 IGHA2P01877 340 aa18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 NR5A1Q13285 461 aa18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 PKN2Q16513 984 aaKnown RBP18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 PCNX4Q63HM2 1172 aa18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 NOSTRINQ8IVI9 506 aa18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 RAET1EQ8TD07 263 aa18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 RASGRP4Q8TDF6 673 aa18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 CRYGNQ8WXF5 182 aa18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 TINF2Q9BSI4 451 aa18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 MTMR6Q9Y217 621 aa18.77■□□□□ 0.6
SPTLC2-203ENST00000554901 NR3C2P08235 984 aa18.76■□□□□ 0.59
SPTLC2-203ENST00000554901 CYP3A4P08684 503 aa18.76■□□□□ 0.59
SPTLC2-203ENST00000554901 EIF2AK2P19525 551 aaKnown RBP18.76■□□□□ 0.59
SPTLC2-203ENST00000554901 CCND2P30279 289 aa18.76■□□□□ 0.59
SPTLC2-203ENST00000554901 USP11P51784 963 aa18.76■□□□□ 0.59
SPTLC2-203ENST00000554901 PGM5Q15124 567 aa18.76■□□□□ 0.59
SPTLC2-203ENST00000554901 BRAPQ7Z569 592 aa18.76■□□□□ 0.59
SPTLC2-203ENST00000554901 VSIG10LQ86VR7 867 aa18.76■□□□□ 0.59
SPTLC2-203ENST00000554901 PURBQ96QR8 312 aaKnown RBP18.76■□□□□ 0.59
SPTLC2-203ENST00000554901 NRBP1Q9UHY1 535 aa18.76■□□□□ 0.59
SPTLC2-203ENST00000554901 LCTP09848 1927 aa18.76■□□□□ 0.59
SPTLC2-203ENST00000554901 PLXNA1Q9UIW2 1896 aa18.76■□□□□ 0.59
SPTLC2-203ENST00000554901 ARHGAP4P98171 946 aa18.75■□□□□ 0.59
SPTLC2-203ENST00000554901 STXBP2Q15833 593 aa18.75■□□□□ 0.59
SPTLC2-203ENST00000554901 MCTP1Q6DN14 999 aa18.75■□□□□ 0.59
SPTLC2-203ENST00000554901 SLAIN1Q8ND83 568 aa18.75■□□□□ 0.59
SPTLC2-203ENST00000554901 NAP1L4Q99733 375 aaKnown RBP18.75■□□□□ 0.59
SPTLC2-203ENST00000554901 ZSCAN16Q9H4T2 348 aaPredicted RBP18.75■□□□□ 0.59
SPTLC2-203ENST00000554901 PTPN22Q9Y2R2 807 aa18.75■□□□□ 0.59
SPTLC2-203ENST00000554901 ADCY3O60266 1144 aa18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 EIF3JO75822 258 aaKnown RBP18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 DDIT3P35638 169 aa18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 TRAPPC10P48553 1259 aa18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 PDE4DQ08499 809 aa18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 MFSD14CQ5VZR4 134 aa18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 MOXD1Q6UVY6 613 aa18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 PIK3AP1Q6ZUJ8 805 aa18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 ARMCX2Q7L311 632 aa18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 TBCKQ8TEA7 893 aa18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 PGBD1Q96JS3 809 aa18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 ABHD16BQ9H3Z7 469 aa18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 CIZ1Q9ULV3 898 aaPredicted RBP18.74■□□□□ 0.59
SPTLC2-203ENST00000554901 KIF28PB7ZC32 967 aa18.73■□□□□ 0.59
SPTLC2-203ENST00000554901 HMGCRP04035 888 aa18.73■□□□□ 0.59
SPTLC2-203ENST00000554901 ZSCAN22P10073 491 aaPredicted RBP18.73■□□□□ 0.59
SPTLC2-203ENST00000554901 CIITAP33076 1130 aa18.73■□□□□ 0.59
SPTLC2-203ENST00000554901 NUCB2P80303 420 aa18.73■□□□□ 0.59
SPTLC2-203ENST00000554901 CCL14Q16627 93 aa18.73■□□□□ 0.59
SPTLC2-203ENST00000554901 NEK8Q86SG6 692 aa18.73■□□□□ 0.59
SPTLC2-203ENST00000554901 TRIB2Q92519 343 aa18.73■□□□□ 0.59
SPTLC2-203ENST00000554901 VTA1Q9NP79 307 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms