RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 PNMA1Q8ND90 353 aa14.33□□□□□ -0.12
MTHFD1-207ENST00000554677 OR6J1Q8NGC5 347 aa14.33□□□□□ -0.12
MTHFD1-207ENST00000554677 PPP1R13LQ8WUF5 828 aa14.33□□□□□ -0.12
MTHFD1-207ENST00000554677 SCLYQ96I15 445 aa14.33□□□□□ -0.12
MTHFD1-207ENST00000554677 IL25Q9H293 177 aa14.33□□□□□ -0.12
MTHFD1-207ENST00000554677 POLR3EQ9NVU0 708 aa14.33□□□□□ -0.12
MTHFD1-207ENST00000554677 PRRC2BQ5JSZ5 2229 aaKnown RBP14.33□□□□□ -0.12
MTHFD1-207ENST00000554677 A6NJR5 290 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 B4E1Z4 1266 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 NKRFO15226 690 aaKnown RBP eCLIP14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 MYL3P08590 195 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 CPT1AP50416 773 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 PDE4DQ08499 809 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 ADGRE1Q14246 886 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 NBPF20Q3BBV1 942 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 USH1GQ495M9 461 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 CCDC62Q6P9F0 684 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 ADGRF4Q8IZF3 695 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 ENAHQ8N8S7 591 aaPredicted RBP14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 TAAR1Q96RJ0 339 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 ZSCAN10Q96SZ4 725 aaPredicted RBP14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 MTG1Q9BT17 334 aaPredicted RBP14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 DSCC1Q9BVC3 393 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 PRDM6Q9NQX0 595 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 COL20A1Q9P218 1284 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 YBX2Q9Y2T7 364 aaKnown RBP14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 TNKSO95271 1327 aa14.32□□□□□ -0.12
MTHFD1-207ENST00000554677 NT5C2P49902 561 aa14.31□□□□□ -0.12
MTHFD1-207ENST00000554677 PPP2R5BQ15173 497 aa14.31□□□□□ -0.12
MTHFD1-207ENST00000554677 CDC37Q16543 378 aaPredicted RBP14.31□□□□□ -0.12
MTHFD1-207ENST00000554677 CCDC178Q5BJE1 867 aa14.31□□□□□ -0.12
MTHFD1-207ENST00000554677 IQCA1Q86XH1 822 aa14.31□□□□□ -0.12
MTHFD1-207ENST00000554677 SYTL5Q8TDW5 730 aaPredicted RBP14.31□□□□□ -0.12
MTHFD1-207ENST00000554677 SCFD2Q8WU76 684 aa14.31□□□□□ -0.12
MTHFD1-207ENST00000554677 MAF1Q9H063 256 aa14.31□□□□□ -0.12
MTHFD1-207ENST00000554677 NKX2-4Q9H2Z4 354 aa14.31□□□□□ -0.12
MTHFD1-207ENST00000554677 PRDM12Q9H4Q4 367 aa14.31□□□□□ -0.12
MTHFD1-207ENST00000554677 SUPT20HL2P0C7V6 817 aa14.3□□□□□ -0.12
MTHFD1-207ENST00000554677 TXNP10599 105 aaKnown RBP14.3□□□□□ -0.12
MTHFD1-207ENST00000554677 RABGGTBP53611 331 aa14.3□□□□□ -0.12
MTHFD1-207ENST00000554677 TTLL4Q14679 1199 aa14.3□□□□□ -0.12
MTHFD1-207ENST00000554677 QRICH1Q2TAL8 776 aa14.3□□□□□ -0.12
MTHFD1-207ENST00000554677 RPUSD2Q8IZ73 545 aaKnown RBP14.3□□□□□ -0.12
MTHFD1-207ENST00000554677 CTAGE1Q96RT6 745 aa14.3□□□□□ -0.12
MTHFD1-207ENST00000554677 KAT14Q9H8E8 782 aa14.3□□□□□ -0.12
MTHFD1-207ENST00000554677 JMJD4Q9H9V9 463 aa14.3□□□□□ -0.12
MTHFD1-207ENST00000554677 DIAPH3Q9NSV4 1193 aa14.3□□□□□ -0.12
MTHFD1-207ENST00000554677 MSRAQ9UJ68 235 aa14.3□□□□□ -0.12
MTHFD1-207ENST00000554677 PTPRSQ13332 1948 aa14.3□□□□□ -0.12
MTHFD1-207ENST00000554677 HIP1O00291 1037 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 OPLAHO14841 1288 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 KPNA6O60684 536 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 MYOGP15173 224 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 PDE4AP27815 886 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 SEC23AQ15436 765 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 RAB30Q15771 203 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 ASPRV1Q53RT3 343 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 NFRKBQ6P4R8 1299 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 STAG2Q8N3U4 1231 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 VAT1LQ9HCJ6 419 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 GPHNQ9NQX3 736 aaPredicted RBP14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 GTF3C3Q9Y5Q9 886 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 ABCB11O95342 1321 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 TANC1Q9C0D5 1861 aa14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 TCF20Q9UGU0 1960 aaKnown RBP14.29□□□□□ -0.12
MTHFD1-207ENST00000554677 ARHGAP1Q07960 439 aa14.28□□□□□ -0.12
MTHFD1-207ENST00000554677 LY6KQ17RY6 165 aa14.28□□□□□ -0.12
MTHFD1-207ENST00000554677 SLC35G1Q2M3R5 365 aa14.28□□□□□ -0.12
MTHFD1-207ENST00000554677 CYB5R4Q7L1T6 521 aa14.28□□□□□ -0.12
MTHFD1-207ENST00000554677 AFG1LQ8WV93 481 aa14.28□□□□□ -0.12
MTHFD1-207ENST00000554677 KAT2BQ92831 832 aa14.28□□□□□ -0.12
MTHFD1-207ENST00000554677 MTMR8Q96EF0 704 aa14.28□□□□□ -0.12
MTHFD1-207ENST00000554677 YTHDC1Q96MU7 727 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-207ENST00000554677 GAS2L1Q99501 681 aaPredicted RBP14.28□□□□□ -0.12
MTHFD1-207ENST00000554677 MPHOSPH6Q99547 160 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-207ENST00000554677 MTIF3Q9H2K0 278 aaKnown RBP14.28□□□□□ -0.12
MTHFD1-207ENST00000554677 SLC4A7Q9Y6M7 1214 aa14.28□□□□□ -0.12
MTHFD1-207ENST00000554677 B4DLN1 442 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 PPP1R11O60927 126 aaPredicted RBP14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 PARP1P09874 1014 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 IQCF3P0C7M6 154 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 GSPT1P15170 499 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 MRPL12P52815 198 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 PTPN11Q06124 597 aaPredicted RBP14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 GPNMBQ14956 572 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 IMMTQ16891 758 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 BRDTQ58F21 947 aaPredicted RBP14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 SEPT14Q6ZU15 432 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 DEFB128Q7Z7B8 93 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 FBXO11Q86XK2 927 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 NSUN6Q8TEA1 469 aaKnown RBP14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 IWS1Q96ST2 819 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 RMDN3Q96TC7 470 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 KRT23Q9C075 422 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 SLC28A3Q9HAS3 691 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 CTNNA3Q9UI47 895 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 PCDHA11Q9Y5I1 949 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 BRWD1Q9NSI6 2320 aa14.27□□□□□ -0.13
MTHFD1-207ENST00000554677 RAD50Q92878 1312 aa14.26□□□□□ -0.13
MTHFD1-207ENST00000554677 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms