RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, human

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-215	ENST00000554567	MRPS5	P82675	430 aa	Known RBP	31.12	■■■□□ 2.57
KTN1-215	ENST00000554567	HDAC1	Q13547	482 aa	Predicted RBP	31.12	■■■□□ 2.57
KTN1-215	ENST00000554567	MUC3A	Q02505	3323 aa		31.11	■■■□□ 2.57
KTN1-215	ENST00000554567		B4DLN1	442 aa		31.11	■■■□□ 2.57
KTN1-215	ENST00000554567	KPNA6	O60684	536 aa		31.11	■■■□□ 2.57
KTN1-215	ENST00000554567	PC	P11498	1178 aa	Known RBP	31.11	■■■□□ 2.57
KTN1-215	ENST00000554567	MRPL12	P52815	198 aa	Known RBP	31.11	■■■□□ 2.57
KTN1-215	ENST00000554567	RETREG2	Q8NC44	543 aa		31.11	■■■□□ 2.57
KTN1-215	ENST00000554567	ESR2	Q92731	530 aa		31.11	■■■□□ 2.57
KTN1-215	ENST00000554567	RNF41	Q9H4P4	317 aa	Predicted RBP	31.11	■■■□□ 2.57
KTN1-215	ENST00000554567	SCN5A	Q14524	2016 aa		31.1	■■■□□ 2.57
KTN1-215	ENST00000554567		A6NJR5	290 aa		31.1	■■■□□ 2.57
KTN1-215	ENST00000554567	ACTN1	P12814	892 aa		31.1	■■■□□ 2.57
KTN1-215	ENST00000554567	TMEM67	Q5HYA8	995 aa		31.1	■■■□□ 2.57
KTN1-215	ENST00000554567	GPATCH4	Q5T3I0	446 aa	Known RBP	31.1	■■■□□ 2.57
KTN1-215	ENST00000554567	NFRKB	Q6P4R8	1299 aa		31.1	■■■□□ 2.57
KTN1-215	ENST00000554567	TICAM2	Q86XR7	235 aa		31.1	■■■□□ 2.57
KTN1-215	ENST00000554567	FTO	Q9C0B1	505 aa	Known RBP eCLIP	31.1	■■■□□ 2.57
KTN1-215	ENST00000554567	NEDD4	P46934	1319 aa		31.09	■■■□□ 2.57
KTN1-215	ENST00000554567	IL27	Q8NEV9	243 aa		31.09	■■■□□ 2.57
KTN1-215	ENST00000554567	ADAMTS19	Q8TE59	1207 aa		31.09	■■■□□ 2.57
KTN1-215	ENST00000554567	NOD1	Q9Y239	953 aa		31.09	■■■□□ 2.57
KTN1-215	ENST00000554567	ZNF213	O14771	459 aa		31.08	■■■□□ 2.57
KTN1-215	ENST00000554567	ARIH2	O95376	493 aa		31.08	■■■□□ 2.57
KTN1-215	ENST00000554567	CA3	P07451	260 aa		31.08	■■■□□ 2.57
KTN1-215	ENST00000554567	IQCF3	P0C7M6	154 aa		31.08	■■■□□ 2.57
KTN1-215	ENST00000554567	MFAP1	P55081	439 aa	Known RBP	31.08	■■■□□ 2.57
KTN1-215	ENST00000554567	TBC1D5	Q92609	795 aa		31.08	■■■□□ 2.57
KTN1-215	ENST00000554567	TSPYL2	Q9H2G4	693 aa	Predicted RBP	31.08	■■■□□ 2.57
KTN1-215	ENST00000554567	CERS4	Q9HA82	394 aa		31.08	■■■□□ 2.57
KTN1-215	ENST00000554567	SCN10A	Q9Y5Y9	1956 aa		31.07	■■■□□ 2.56
KTN1-215	ENST00000554567	RFXAP	O00287	272 aa		31.07	■■■□□ 2.56
KTN1-215	ENST00000554567	SDS	P20132	328 aa		31.07	■■■□□ 2.56
KTN1-215	ENST00000554567	B4GALNT3	Q6L9W6	998 aa		31.07	■■■□□ 2.56
KTN1-215	ENST00000554567	SEPT14	Q6ZU15	432 aa		31.07	■■■□□ 2.56
KTN1-215	ENST00000554567	DGKH	Q86XP1	1220 aa		31.07	■■■□□ 2.56
KTN1-215	ENST00000554567	RFC2	P35250	354 aa		31.06	■■■□□ 2.56
KTN1-215	ENST00000554567	CDC37	Q16543	378 aa	Predicted RBP	31.06	■■■□□ 2.56
KTN1-215	ENST00000554567	PNMA1	Q8ND90	353 aa		31.06	■■■□□ 2.56
KTN1-215	ENST00000554567	RGS22	Q8NE09	1264 aa		31.06	■■■□□ 2.56
KTN1-215	ENST00000554567	PITPNM1	O00562	1244 aa		31.05	■■■□□ 2.56
KTN1-215	ENST00000554567	KDM4A	O75164	1064 aa		31.05	■■■□□ 2.56
KTN1-215	ENST00000554567	PTPN11	Q06124	597 aa	Predicted RBP	31.05	■■■□□ 2.56
KTN1-215	ENST00000554567	BFSP2	Q13515	415 aa		31.05	■■■□□ 2.56
KTN1-215	ENST00000554567	CHST3	Q7LGC8	479 aa		31.05	■■■□□ 2.56
KTN1-215	ENST00000554567	AFG1L	Q8WV93	481 aa		31.05	■■■□□ 2.56
KTN1-215	ENST00000554567	TAAR1	Q96RJ0	339 aa		31.05	■■■□□ 2.56
KTN1-215	ENST00000554567	KAT14	Q9H8E8	782 aa		31.05	■■■□□ 2.56
KTN1-215	ENST00000554567	CHD7	Q9P2D1	2997 aa		31.04	■■■□□ 2.56
KTN1-215	ENST00000554567	SKIV2L	Q15477	1246 aa	Known RBP	31.04	■■■□□ 2.56
KTN1-215	ENST00000554567	PTGIS	Q16647	500 aa		31.04	■■■□□ 2.56
KTN1-215	ENST00000554567	LY6K	Q17RY6	165 aa		31.04	■■■□□ 2.56
KTN1-215	ENST00000554567	IQCA1	Q86XH1	822 aa		31.04	■■■□□ 2.56
KTN1-215	ENST00000554567	SLC9A7	Q96T83	725 aa		31.04	■■■□□ 2.56
KTN1-215	ENST00000554567	UHRF1	Q96T88	793 aa	Predicted RBP	31.04	■■■□□ 2.56
KTN1-215	ENST00000554567	DHX16	O60231	1041 aa	Known RBP	31.03	■■■□□ 2.56
KTN1-215	ENST00000554567	CCDC62	Q6P9F0	684 aa		31.03	■■■□□ 2.56
KTN1-215	ENST00000554567	CWC27	Q6UX04	472 aa	Known RBP	31.03	■■■□□ 2.56
KTN1-215	ENST00000554567	ADGRF4	Q8IZF3	695 aa		31.03	■■■□□ 2.56
KTN1-215	ENST00000554567	SYTL5	Q8TDW5	730 aa	Predicted RBP	31.03	■■■□□ 2.56
KTN1-215	ENST00000554567	VAT1L	Q9HCJ6	419 aa		31.03	■■■□□ 2.56
KTN1-215	ENST00000554567	ABCB11	O95342	1321 aa		31.02	■■■□□ 2.56
KTN1-215	ENST00000554567	NSUN6	Q8TEA1	469 aa	Known RBP	31.02	■■■□□ 2.56
KTN1-215	ENST00000554567	COL20A1	Q9P218	1284 aa		31.02	■■■□□ 2.56
KTN1-215	ENST00000554567		B4E1Z4	1266 aa		31.01	■■■□□ 2.55
KTN1-215	ENST00000554567	GH1	P01241	217 aa		31.01	■■■□□ 2.55
KTN1-215	ENST00000554567	MMP3	P08254	477 aa		31.01	■■■□□ 2.55
KTN1-215	ENST00000554567	CCDC178	Q5BJE1	867 aa		31.01	■■■□□ 2.55
KTN1-215	ENST00000554567	PHOSPHO2	Q8TCD6	241 aa		31.01	■■■□□ 2.55
KTN1-215	ENST00000554567	RMDN3	Q96TC7	470 aa		31.01	■■■□□ 2.55
KTN1-215	ENST00000554567	TFF2	Q03403	129 aa		31	■■■□□ 2.55
KTN1-215	ENST00000554567	STXBP2	Q15833	593 aa		31	■■■□□ 2.55
KTN1-215	ENST00000554567	HERC6	Q8IVU3	1022 aa		31	■■■□□ 2.55
KTN1-215	ENST00000554567	ARNTL2	Q8WYA1	636 aa		31	■■■□□ 2.55
KTN1-215	ENST00000554567	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	31	■■■□□ 2.55
KTN1-215	ENST00000554567	DIAPH3	Q9NSV4	1193 aa		31	■■■□□ 2.55
KTN1-215	ENST00000554567	KIF28P	B7ZC32	967 aa		30.99	■■■□□ 2.55
KTN1-215	ENST00000554567	GTPBP6	O43824	516 aa	Predicted RBP	30.99	■■■□□ 2.55
KTN1-215	ENST00000554567	COL9A1	P20849	921 aa		30.99	■■■□□ 2.55
KTN1-215	ENST00000554567	ARHGAP1	Q07960	439 aa		30.99	■■■□□ 2.55
KTN1-215	ENST00000554567	QRICH1	Q2TAL8	776 aa		30.99	■■■□□ 2.55
KTN1-215	ENST00000554567	GDF6	Q6KF10	455 aa	Predicted RBP	30.99	■■■□□ 2.55
KTN1-215	ENST00000554567	MCF2L2	Q86YR7	1114 aa		30.99	■■■□□ 2.55
KTN1-215	ENST00000554567	MTCH2	Q9Y6C9	303 aa		30.99	■■■□□ 2.55
KTN1-215	ENST00000554567	TRIP12	Q14669	1992 aa	Predicted RBP	30.98	■■■□□ 2.55
KTN1-215	ENST00000554567	EPOP	A6NHQ4	379 aa		30.98	■■■□□ 2.55
KTN1-215	ENST00000554567	ASPRV1	Q53RT3	343 aa		30.98	■■■□□ 2.55
KTN1-215	ENST00000554567	ARHGEF16	Q5VV41	709 aa		30.98	■■■□□ 2.55
KTN1-215	ENST00000554567	KRT40	Q6A162	431 aa		30.98	■■■□□ 2.55
KTN1-215	ENST00000554567	FBXO11	Q86XK2	927 aa		30.98	■■■□□ 2.55
KTN1-215	ENST00000554567	PLEKHM2	Q8IWE5	1019 aa		30.98	■■■□□ 2.55
KTN1-215	ENST00000554567	CCDC155	Q8N6L0	562 aa		30.98	■■■□□ 2.55
KTN1-215	ENST00000554567	RWDD1	Q9H446	243 aa	Predicted RBP	30.98	■■■□□ 2.55
KTN1-215	ENST00000554567	ZSWIM5	Q9P217	1185 aa		30.98	■■■□□ 2.55
KTN1-215	ENST00000554567	MRPL11	Q9Y3B7	192 aa	Known RBP	30.98	■■■□□ 2.55
KTN1-215	ENST00000554567	ARHGEF15	O94989	841 aa		30.97	■■■□□ 2.55
KTN1-215	ENST00000554567	PARP1	P09874	1014 aa	Known RBP	30.97	■■■□□ 2.55
KTN1-215	ENST00000554567	EIF2AK2	P19525	551 aa	Known RBP	30.97	■■■□□ 2.55
KTN1-215	ENST00000554567	CAST	P20810	708 aa	Known RBP	30.97	■■■□□ 2.55
KTN1-215	ENST00000554567	KCNJ6	P48051	423 aa		30.97	■■■□□ 2.55

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