RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PEX5P50542 639 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 ZNF131P52739 623 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 USP46P62068 366 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 KRT83P78385 493 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 LACTBP83111 547 aaPredicted RBP10.5□□□□□ -0.73
SIX4-202ENST00000554079 CBX3Q13185 183 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 KRT31Q15323 416 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 EXOC3L1Q86VI1 746 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 ARL10Q8N8L6 244 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 ZBTB8BQ8NAP8 495 aaPredicted RBP10.5□□□□□ -0.73
SIX4-202ENST00000554079 DNAJC7Q99615 494 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 VCXQ9H320 206 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 UNC45AQ9H3U1 944 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 TSPYL4Q9UJ04 414 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 SLC4A7Q9Y6M7 1214 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 DIP2AQ14689 1571 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 MRC1P22897 1456 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 ESYT3A0FGR9 886 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 TMCC1O94876 653 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 HEXIM1O94992 359 aaKnown RBP10.5□□□□□ -0.73
SIX4-202ENST00000554079 VIL1P09327 827 aaKnown RBP10.5□□□□□ -0.73
SIX4-202ENST00000554079 GSTT1P30711 240 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 CCT6AP40227 531 aaKnown RBP10.5□□□□□ -0.73
SIX4-202ENST00000554079 CEBPAP49715 358 aaPredicted RBP10.5□□□□□ -0.73
SIX4-202ENST00000554079 PHEXP78562 749 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 ATP11AP98196 1134 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 TMED1Q13445 227 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 RRS1Q15050 365 aaKnown RBP10.5□□□□□ -0.73
SIX4-202ENST00000554079 TTC39AQ5SRH9 613 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 ASRGL1Q7L266 308 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 AACSQ86V21 672 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 RNF168Q8IYW5 571 aaPredicted RBP10.5□□□□□ -0.73
SIX4-202ENST00000554079 NOC3LQ8WTT2 800 aaKnown RBP10.5□□□□□ -0.73
SIX4-202ENST00000554079 CORO1BQ9BR76 489 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 TIPINQ9BVW5 301 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 EPB41L5Q9HCM4 733 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 TMOD4Q9NZQ9 345 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 SERTAD1Q9UHV2 236 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 THRAP3Q9Y2W1 955 aaKnown RBP10.5□□□□□ -0.73
SIX4-202ENST00000554079 DUSP10Q9Y6W6 482 aa10.5□□□□□ -0.73
SIX4-202ENST00000554079 HSD17B3P37058 310 aa10.49□□□□□ -0.73
SIX4-202ENST00000554079 STX17P56962 302 aa10.49□□□□□ -0.73
SIX4-202ENST00000554079 PLOD1Q02809 727 aaPredicted RBP10.49□□□□□ -0.73
SIX4-202ENST00000554079 NFRKBQ6P4R8 1299 aa10.49□□□□□ -0.73
SIX4-202ENST00000554079 RUFY4Q6ZNE9 571 aa10.49□□□□□ -0.73
SIX4-202ENST00000554079 GRAMD1CQ8IYS0 662 aa10.49□□□□□ -0.73
SIX4-202ENST00000554079 OR2W6PQ8NHA6 318 aa10.49□□□□□ -0.73
SIX4-202ENST00000554079 PTPRN2Q92932 1015 aa10.49□□□□□ -0.73
SIX4-202ENST00000554079 FAM192AQ9GZU8 254 aa10.49□□□□□ -0.73
SIX4-202ENST00000554079 RNPEPL1Q9HAU8 725 aa10.49□□□□□ -0.73
SIX4-202ENST00000554079 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.49□□□□□ -0.73
SIX4-202ENST00000554079 FMN2Q9NZ56 1722 aa10.49□□□□□ -0.73
SIX4-202ENST00000554079 CIDEBQ9UHD4 219 aa10.49□□□□□ -0.73
SIX4-202ENST00000554079 HYOU1Q9Y4L1 999 aa10.49□□□□□ -0.73
SIX4-202ENST00000554079 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.49□□□□□ -0.73
SIX4-202ENST00000554079 DCDC2CA8MYV0 355 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 PEX11AO75192 247 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 GFPT2O94808 682 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 OAS1P00973 400 aaKnown RBP10.48□□□□□ -0.73
SIX4-202ENST00000554079 TCP1P17987 556 aaKnown RBP10.48□□□□□ -0.73
SIX4-202ENST00000554079 COPB1P53618 953 aaKnown RBP10.48□□□□□ -0.73
SIX4-202ENST00000554079 GUCY2DQ02846 1103 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 BNIP1Q12981 228 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 MEA1Q16626 185 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 KBTBD12Q3ZCT8 623 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 CHADLQ6NUI6 762 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 BICDL1Q6ZP65 573 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 KIF2BQ8N4N8 673 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 USHBP1Q8N6Y0 703 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 UCMAQ8WVF2 138 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 SPIRE2Q8WWL2 714 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 IFT81Q8WYA0 676 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 MTA3Q9BTC8 594 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 RAB17Q9H0T7 212 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 VCX3BQ9H321 246 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 CNOT10Q9H9A5 744 aaKnown RBP10.48□□□□□ -0.73
SIX4-202ENST00000554079 VCX3AQ9NNX9 186 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 RHBDL2Q9NX52 303 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 NOVA2Q9UNW9 492 aaKnown RBP10.48□□□□□ -0.73
SIX4-202ENST00000554079 CAPN6Q9Y6Q1 641 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 C3P01024 1663 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 MYH4Q9Y623 1939 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 CASZ1Q86V15 1759 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 TTC26A0AVF1 554 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 F8VZ95 297 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 ACTN4O43707 911 aaKnown RBP10.48□□□□□ -0.73
SIX4-202ENST00000554079 HIP1RO75146 1068 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 CALB2P22676 271 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 RAD23BP54727 409 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 COPS2P61201 443 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 SLC4A8Q2Y0W8 1093 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 SMC1BQ8NDV3 1235 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 FBF1Q8TES7 1133 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 ATXN2LQ8WWM7 1075 aaKnown RBP10.48□□□□□ -0.73
SIX4-202ENST00000554079 TLCD1Q96CP7 247 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 KLHL29Q96CT2 875 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 OXCT2Q9BYC2 517 aaPredicted RBP10.48□□□□□ -0.73
SIX4-202ENST00000554079 BRD8Q9H0E9 1235 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 CARD9Q9H257 536 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 NUB1Q9Y5A7 615 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms