RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 RBM47A0AV96 593 aaKnown RBP10.75□□□□□ -0.69
CHD8-206ENST00000553870 PFKFB2O60825 505 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 EIF3JO75822 258 aaKnown RBP10.75□□□□□ -0.69
CHD8-206ENST00000553870 STAM2O75886 525 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 CDKL5O76039 1030 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 FARP2O94887 1054 aaPredicted RBP10.75□□□□□ -0.69
CHD8-206ENST00000553870 AK2P54819 239 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 NKX3-2P78367 333 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 CCDC144BQ3MJ40 725 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 MCTP2Q6DN12 878 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 TAPT1Q6NXT6 567 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 XRRA1Q6P2D8 792 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 NECAB2Q7Z6G3 386 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 TRIM22Q8IYM9 498 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 SMARCC2Q8TAQ2 1214 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 PURBQ96QR8 312 aaKnown RBP10.75□□□□□ -0.69
CHD8-206ENST00000553870 SPC25Q9HBM1 224 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 PXMP2Q9NR77 195 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 BARHL2Q9NY43 387 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 COL20A1Q9P218 1284 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 MYH6P13533 1939 aa10.75□□□□□ -0.69
CHD8-206ENST00000553870 DNM1LO00429 736 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 MEIS2O14770 477 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 NKRFO15226 690 aaKnown RBP eCLIP10.74□□□□□ -0.694e-6■□□□□ 9.9
CHD8-206ENST00000553870 FOSP01100 380 aaPredicted RBP10.74□□□□□ -0.69
CHD8-206ENST00000553870 NR3C2P08235 984 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 SCG2P13521 617 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 CCT2P78371 535 aaKnown RBP10.74□□□□□ -0.69
CHD8-206ENST00000553870 TNFAIP2Q03169 654 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 SSRP1Q08945 709 aaKnown RBP10.74□□□□□ -0.69
CHD8-206ENST00000553870 RABEP1Q15276 862 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 DUSP28Q4G0W2 176 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 WWC2Q6AWC2 1192 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 KCNV1Q6PIU1 500 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 HEATR3Q7Z4Q2 680 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 RNF180Q86T96 592 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 VSIG10LQ86VR7 867 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 SCFD2Q8WU76 684 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 KIF2CQ99661 725 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 PDCD2LQ9BRP1 358 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 TSEN34Q9BSV6 310 aaKnown RBP10.74□□□□□ -0.69
CHD8-206ENST00000553870 HTATIP2Q9BUP3 242 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 RIC8AQ9NPQ8 531 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 XPNPEP3Q9NQH7 507 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 SH3GLB2Q9NR46 395 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 TPCN1Q9ULQ1 816 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 LIMCH1Q9UPQ0 1083 aa10.74□□□□□ -0.69
CHD8-206ENST00000553870 CENPFP49454 3210 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 hCG_1642624A0A1W2PR95 340 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 ESYT2A0FGR8 921 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 SMCO2A6NFE2 343 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 DEXIO95424 95 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 TGFB3P10600 412 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 CST5P28325 142 aaPredicted RBP10.73□□□□□ -0.69
CHD8-206ENST00000553870 GNA11P29992 359 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 HOXA13P31271 388 aaPredicted RBP10.73□□□□□ -0.69
CHD8-206ENST00000553870 MNX1P50219 401 aaPredicted RBP10.73□□□□□ -0.69
CHD8-206ENST00000553870 NAPAP54920 295 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 GJA9P57773 515 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 TTLL4Q14679 1199 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 PKN1Q16512 942 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 USP17L6PQ6QN14 398 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 PCSK9Q8NBP7 692 aaKnown RBP10.73□□□□□ -0.69
CHD8-206ENST00000553870 CCDC148Q8NFR7 591 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 PAWRQ96IZ0 340 aaKnown RBP10.73□□□□□ -0.69
CHD8-206ENST00000553870 ZSCAN31Q96LW9 406 aaPredicted RBP10.73□□□□□ -0.69
CHD8-206ENST00000553870 SLC26A6Q9BXS9 759 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 BACH2Q9BYV9 841 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 ZMYND12Q9H0C1 365 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 UPF3AQ9H1J1 476 aaKnown RBP10.73□□□□□ -0.69
CHD8-206ENST00000553870 EHMT1Q9H9B1 1298 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 GNEQ9Y223 722 aaKnown RBP10.73□□□□□ -0.69
CHD8-206ENST00000553870 FRMPD4Q14CM0 1322 aa10.73□□□□□ -0.69
CHD8-206ENST00000553870 MOXD2PA6NHM9 499 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 SPDYE3A6NKU9 549 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 KBTBD13C9JR72 458 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 STXBP3O00186 592 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 ZEB2O60315 1214 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 COL6A1P12109 1028 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 EIF2AK2P19525 551 aaKnown RBP10.72□□□□□ -0.69
CHD8-206ENST00000553870 CCND2P30279 289 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 ADCYAP1R1P41586 468 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 ADCY7P51828 1080 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 SCRN1Q12765 414 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 STK3Q13188 491 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 AP3B2Q13367 1082 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 PGM5Q15124 567 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 LRRC41Q15345 812 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 ME3Q16798 604 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 GALNT17Q6IS24 598 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 NOL8Q76FK4 1167 aaKnown RBP10.72□□□□□ -0.69
CHD8-206ENST00000553870 EEPD1Q7L9B9 569 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 FCHSD1Q86WN1 690 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 KLHDC9Q8NEP7 349 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 BICD2Q8TD16 824 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 WASF1Q92558 559 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 GPKOWQ92917 476 aaPredicted RBP eCLIP10.72□□□□□ -0.69
CHD8-206ENST00000553870 PHKBQ93100 1093 aa10.72□□□□□ -0.69
CHD8-206ENST00000553870 LARP6Q9BRS8 491 aaKnown RBP10.72□□□□□ -0.69
CHD8-206ENST00000553870 WDR11Q9BZH6 1224 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms